RNA–Protein interactions for RNA: ENST00000498509.2

PHF7-209, Transcript of PHD finger protein 7, humanhuman

TSL 1 (best)

Gene PHF7, Length 1,727 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF7-209ENST00000498509 NISCHQ9Y2I1 1504 aa16.73■□□□□ 0.27
PHF7-209ENST00000498509 PELP1Q8IZL8 1130 aaKnown RBP16.16■□□□□ 0.18
PHF7-209ENST00000498509 CHIC1Q5VXU3 224 aa15.91■□□□□ 0.14
PHF7-209ENST00000498509 MYT1Q01538 1121 aa15.81■□□□□ 0.12
PHF7-209ENST00000498509 HRCP23327 699 aa15.74■□□□□ 0.11
PHF7-209ENST00000498509 AEBP2Q6ZN18 517 aaPredicted RBP15.41■□□□□ 0.06
PHF7-209ENST00000498509 TTBK1Q5TCY1 1321 aaPredicted RBP15.06■□□□□ 0
PHF7-209ENST00000498509 PPARGC1BQ86YN6 1023 aaKnown RBP14.99□□□□□ -0.01
PHF7-209ENST00000498509 SCAF1Q9H7N4 1312 aaKnown RBP14.97□□□□□ -0.01
PHF7-209ENST00000498509 PCGF6Q9BYE7 350 aa14.93□□□□□ -0.02
PHF7-209ENST00000498509 DCAF1Q9Y4B6 1507 aa14.92□□□□□ -0.02
PHF7-209ENST00000498509 ZEB1P37275 1124 aaPredicted RBP14.87□□□□□ -0.03
PHF7-209ENST00000498509 MYO15BQ96JP2 1530 aa14.82□□□□□ -0.04
PHF7-209ENST00000498509 CCDC180Q9P1Z9 1646 aa14.82□□□□□ -0.04
PHF7-209ENST00000498509 TRIM26Q12899 539 aaPredicted RBP14.64□□□□□ -0.07
PHF7-209ENST00000498509 ACIN1Q9UKV3 1341 aaKnown RBP14.62□□□□□ -0.07
PHF7-209ENST00000498509 CENPBP07199 599 aaPredicted RBP14.45□□□□□ -0.1
PHF7-209ENST00000498509 SUPT5HO00267 1087 aaKnown RBP14.41□□□□□ -0.1
PHF7-209ENST00000498509 NEUROD1Q13562 356 aa14.38□□□□□ -0.11
PHF7-209ENST00000498509 GTF3C3Q9Y5Q9 886 aa14.37□□□□□ -0.11
PHF7-209ENST00000498509 SHROOM4Q9ULL8 1493 aa14.23□□□□□ -0.13
PHF7-209ENST00000498509 BCL11AQ9H165 835 aa14.23□□□□□ -0.13
PHF7-209ENST00000498509 PHF23Q9BUL5 403 aaPredicted RBP14.14□□□□□ -0.15
PHF7-209ENST00000498509 CLSPNQ9HAW4 1339 aa14.09□□□□□ -0.15
PHF7-209ENST00000498509 ANP32EQ9BTT0 268 aa14.07□□□□□ -0.16
PHF7-209ENST00000498509 DIEXFQ68CQ4 756 aaKnown RBP14.06□□□□□ -0.16
PHF7-209ENST00000498509 LOC105371045A0A1W2PR82 267 aa14.05□□□□□ -0.16
PHF7-209ENST00000498509 ZCCHC6Q5VYS8 1495 aaKnown RBP14.05□□□□□ -0.16
PHF7-209ENST00000498509 ERICH6Q7L0X2 663 aa14.03□□□□□ -0.16
PHF7-209ENST00000498509 FAM9AQ8IZU1 332 aaPredicted RBP14.02□□□□□ -0.16
PHF7-209ENST00000498509 PRKCSHP14314 528 aaPredicted RBP13.97□□□□□ -0.17
PHF7-209ENST00000498509 TRIM41Q8WV44 630 aa13.93□□□□□ -0.18
PHF7-209ENST00000498509 DCAF8L2P0C7V8 631 aa13.89□□□□□ -0.19
PHF7-209ENST00000498509 APLP2Q06481 763 aa13.81□□□□□ -0.2
PHF7-209ENST00000498509 CCER1Q8TC90 406 aaPredicted RBP13.78□□□□□ -0.2
PHF7-209ENST00000498509 ABCC9O60706 1549 aa13.78□□□□□ -0.2
PHF7-209ENST00000498509 ZNF316A6NFI3 1004 aaPredicted RBP13.78□□□□□ -0.2
PHF7-209ENST00000498509 CSRNP3Q8WYN3 585 aa13.74□□□□□ -0.21
PHF7-209ENST00000498509 TSHZ2Q9NRE2 1034 aa13.72□□□□□ -0.21
PHF7-209ENST00000498509 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.66□□□□□ -0.22
PHF7-209ENST00000498509 SUPT16HQ9Y5B9 1047 aaKnown RBP13.66□□□□□ -0.22
PHF7-209ENST00000498509 MYT1LQ9UL68 1186 aa13.61□□□□□ -0.23
PHF7-209ENST00000498509 NACADO15069 1562 aa13.59□□□□□ -0.23
PHF7-209ENST00000498509 YTHDC1Q96MU7 727 aaKnown RBP13.59□□□□□ -0.23
PHF7-209ENST00000498509 MIER1Q8N108 512 aa13.58□□□□□ -0.24
PHF7-209ENST00000498509 WRNQ14191 1432 aaPredicted RBP eCLIP13.51□□□□□ -0.25
PHF7-209ENST00000498509 RB1CC1Q8TDY2 1594 aa13.47□□□□□ -0.25
PHF7-209ENST00000498509 ERICH6BQ5W0A0 696 aa13.39□□□□□ -0.27
PHF7-209ENST00000498509 SCRIBQ14160 1630 aa13.39□□□□□ -0.27
PHF7-209ENST00000498509 RBM19Q9Y4C8 960 aaKnown RBP13.36□□□□□ -0.27
PHF7-209ENST00000498509 FANCIQ9NVI1 1328 aa13.34□□□□□ -0.27
PHF7-209ENST00000498509 PLPPR3Q6T4P5 718 aa13.3□□□□□ -0.28
PHF7-209ENST00000498509 UBE2Q2Q8WVN8 375 aa13.25□□□□□ -0.29
PHF7-209ENST00000498509 RSF1Q96T23 1441 aaPredicted RBP13.21□□□□□ -0.29
PHF7-209ENST00000498509 MSH5O43196 834 aa13.21□□□□□ -0.3
PHF7-209ENST00000498509 DEKP35659 375 aaKnown RBP13.18□□□□□ -0.3
PHF7-209ENST00000498509 ANO8Q9HCE9 1232 aaPredicted RBP13.16□□□□□ -0.3
PHF7-209ENST00000498509 NEFLP07196 543 aa13.15□□□□□ -0.3
PHF7-209ENST00000498509 FKBP8Q14318 412 aa13.12□□□□□ -0.31
PHF7-209ENST00000498509 TNIKQ9UKE5 1360 aa13.12□□□□□ -0.31
PHF7-209ENST00000498509 CEP162Q5TB80 1403 aa13.11□□□□□ -0.31
PHF7-209ENST00000498509 UNC13AQ9UPW8 1703 aa13.06□□□□□ -0.32
PHF7-209ENST00000498509 EEA1Q15075 1411 aa13.03□□□□□ -0.32
PHF7-209ENST00000498509 PABPN1Q86U42 306 aaKnown RBP eCLIP13.02□□□□□ -0.32
PHF7-209ENST00000498509 CDK11AQ9UQ88 783 aaPredicted RBP13.02□□□□□ -0.32
PHF7-209ENST00000498509 BCANQ96GW7 911 aa13.02□□□□□ -0.33
PHF7-209ENST00000498509 SALL2Q9Y467 1007 aaPredicted RBP13□□□□□ -0.33
PHF7-209ENST00000498509 EIF4G1Q04637 1599 aaKnown RBP13□□□□□ -0.33
PHF7-209ENST00000498509 BICRAQ9NZM4 1560 aa13□□□□□ -0.33
PHF7-209ENST00000498509 SLC24A1O60721 1099 aa12.98□□□□□ -0.33
PHF7-209ENST00000498509 CECR2Q9BXF3 1484 aa12.98□□□□□ -0.33
PHF7-209ENST00000498509 CCER2I3L3R5 266 aa12.95□□□□□ -0.34
PHF7-209ENST00000498509 DHX57Q6P158 1386 aaKnown RBP12.93□□□□□ -0.34
PHF7-209ENST00000498509 BAZ1AQ9NRL2 1556 aaPredicted RBP12.93□□□□□ -0.34
PHF7-209ENST00000498509 EHMT2Q96KQ7 1210 aa12.93□□□□□ -0.34
PHF7-209ENST00000498509 MROH2BQ7Z745 1585 aa12.91□□□□□ -0.34
PHF7-209ENST00000498509 NOP58Q9Y2X3 529 aaKnown RBP12.91□□□□□ -0.34
PHF7-209ENST00000498509 EIF5BO60841 1220 aaKnown RBP12.88□□□□□ -0.35
PHF7-209ENST00000498509 C11orf95C9JLR9 678 aaPredicted RBP12.88□□□□□ -0.35
PHF7-209ENST00000498509 HNRNPUL2Q1KMD3 747 aaKnown RBP12.87□□□□□ -0.35
PHF7-209ENST00000498509 GOLGA3Q08378 1498 aa12.87□□□□□ -0.35
PHF7-209ENST00000498509 CUX2O14529 1486 aa12.86□□□□□ -0.35
PHF7-209ENST00000498509 SENP3Q9H4L4 574 aaPredicted RBP12.85□□□□□ -0.35
PHF7-209ENST00000498509 ITGAEP38570 1179 aa12.85□□□□□ -0.35
PHF7-209ENST00000498509 RTL5Q5HYW3 569 aaPredicted RBP12.84□□□□□ -0.35
PHF7-209ENST00000498509 SMARCA4P51532 1647 aa12.83□□□□□ -0.36
PHF7-209ENST00000498509 PPP4R2Q9NY27 417 aa12.81□□□□□ -0.36
PHF7-209ENST00000498509 VPS8Q8N3P4 1428 aa12.8□□□□□ -0.36
PHF7-209ENST00000498509 WASHC2AQ641Q2 1341 aa12.8□□□□□ -0.36
PHF7-209ENST00000498509 KCNH8Q96L42 1107 aa12.8□□□□□ -0.36
PHF7-209ENST00000498509 USP35Q9P2H5 1018 aa12.8□□□□□ -0.36
PHF7-209ENST00000498509 PKNOX2Q96KN3 472 aa12.79□□□□□ -0.36
PHF7-209ENST00000498509 CCDC136Q96JN2 1154 aa12.78□□□□□ -0.36
PHF7-209ENST00000498509 WIZO95785 1651 aa12.77□□□□□ -0.36
PHF7-209ENST00000498509 KIF21BO75037 1637 aa12.76□□□□□ -0.37
PHF7-209ENST00000498509 WASHC2CQ9Y4E1 1318 aa12.76□□□□□ -0.37
PHF7-209ENST00000498509 DAXXQ9UER7 740 aaPredicted RBP12.76□□□□□ -0.37
PHF7-209ENST00000498509 IL27Q8NEV9 243 aa12.75□□□□□ -0.37
PHF7-209ENST00000498509 CEP164Q9UPV0 1460 aa12.75□□□□□ -0.37
PHF7-209ENST00000498509 PPP1R15AO75807 674 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms