RNA–Protein interactions for RNA: ENST00000498082.1

CABP1-205, Transcript of calcium binding protein 1, humanhuman

TSL 2

Gene CABP1, Length 3,048 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CABP1-205ENST00000498082 NISCHQ9Y2I1 1504 aa20.34■□□□□ 0.85
CABP1-205ENST00000498082 HRCP23327 699 aa18.84■□□□□ 0.61
CABP1-205ENST00000498082 PPARGC1BQ86YN6 1023 aaKnown RBP18.52■□□□□ 0.56
CABP1-205ENST00000498082 PCGF6Q9BYE7 350 aa18.43■□□□□ 0.54
CABP1-205ENST00000498082 PELP1Q8IZL8 1130 aaKnown RBP18.37■□□□□ 0.53
CABP1-205ENST00000498082 SUPT5HO00267 1087 aaKnown RBP18.32■□□□□ 0.52
CABP1-205ENST00000498082 SHROOM4Q9ULL8 1493 aa18.3■□□□□ 0.52
CABP1-205ENST00000498082 MYO15BQ96JP2 1530 aa18.21■□□□□ 0.51
CABP1-205ENST00000498082 CHIC1Q5VXU3 224 aa18.05■□□□□ 0.48
CABP1-205ENST00000498082 SCAF1Q9H7N4 1312 aaKnown RBP17.96■□□□□ 0.46
CABP1-205ENST00000498082 DCAF1Q9Y4B6 1507 aa17.79■□□□□ 0.44
CABP1-205ENST00000498082 TRIM26Q12899 539 aaPredicted RBP17.73■□□□□ 0.43
CABP1-205ENST00000498082 LOC105371045A0A1W2PR82 267 aa17.71■□□□□ 0.43
CABP1-205ENST00000498082 MYT1Q01538 1121 aa17.67■□□□□ 0.42
CABP1-205ENST00000498082 ZEB1P37275 1124 aaPredicted RBP17.6■□□□□ 0.41
CABP1-205ENST00000498082 CCDC180Q9P1Z9 1646 aa17.59■□□□□ 0.41
CABP1-205ENST00000498082 ACIN1Q9UKV3 1341 aaKnown RBP17.44■□□□□ 0.38
CABP1-205ENST00000498082 NEUROD1Q13562 356 aa17.42■□□□□ 0.38
CABP1-205ENST00000498082 GTF3C3Q9Y5Q9 886 aa17.34■□□□□ 0.37
CABP1-205ENST00000498082 ZCCHC6Q5VYS8 1495 aaKnown RBP17.33■□□□□ 0.36
CABP1-205ENST00000498082 CENPBP07199 599 aaPredicted RBP17.16■□□□□ 0.34
CABP1-205ENST00000498082 DCAF8L2P0C7V8 631 aa17.08■□□□□ 0.33
CABP1-205ENST00000498082 DIEXFQ68CQ4 756 aaKnown RBP17.06■□□□□ 0.32
CABP1-205ENST00000498082 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.02■□□□□ 0.32
CABP1-205ENST00000498082 FAM9AQ8IZU1 332 aaPredicted RBP16.96■□□□□ 0.31
CABP1-205ENST00000498082 CCER1Q8TC90 406 aaPredicted RBP16.96■□□□□ 0.31
CABP1-205ENST00000498082 EHMT2Q96KQ7 1210 aa16.94■□□□□ 0.3
CABP1-205ENST00000498082 TRIM41Q8WV44 630 aa16.88■□□□□ 0.29
CABP1-205ENST00000498082 YTHDC1Q96MU7 727 aaKnown RBP16.85■□□□□ 0.29
CABP1-205ENST00000498082 ZNF316A6NFI3 1004 aaPredicted RBP16.67■□□□□ 0.26
CABP1-205ENST00000498082 MIER1Q8N108 512 aa16.62■□□□□ 0.25
CABP1-205ENST00000498082 BCL11AQ9H165 835 aa16.62■□□□□ 0.25
CABP1-205ENST00000498082 TTBK1Q5TCY1 1321 aaPredicted RBP16.61■□□□□ 0.25
CABP1-205ENST00000498082 ANP32EQ9BTT0 268 aa16.52■□□□□ 0.24
CABP1-205ENST00000498082 PRKCSHP14314 528 aaPredicted RBP16.51■□□□□ 0.23
CABP1-205ENST00000498082 RSF1Q96T23 1441 aaPredicted RBP16.49■□□□□ 0.23
CABP1-205ENST00000498082 ABCC9O60706 1549 aa16.48■□□□□ 0.23
CABP1-205ENST00000498082 RB1CC1Q8TDY2 1594 aa16.45■□□□□ 0.22
CABP1-205ENST00000498082 SUPT16HQ9Y5B9 1047 aaKnown RBP16.44■□□□□ 0.22
CABP1-205ENST00000498082 TSHZ2Q9NRE2 1034 aa16.42■□□□□ 0.22
CABP1-205ENST00000498082 CSRNP3Q8WYN3 585 aa16.38■□□□□ 0.21
CABP1-205ENST00000498082 CLSPNQ9HAW4 1339 aa16.29■□□□□ 0.2
CABP1-205ENST00000498082 WRNQ14191 1432 aaPredicted RBP eCLIP16.26■□□□□ 0.19
CABP1-205ENST00000498082 HNRNPUL2Q1KMD3 747 aaKnown RBP16.19■□□□□ 0.18
CABP1-205ENST00000498082 CEP162Q5TB80 1403 aa16.17■□□□□ 0.18
CABP1-205ENST00000498082 SLC24A1O60721 1099 aa16.17■□□□□ 0.18
CABP1-205ENST00000498082 BCANQ96GW7 911 aa16.11■□□□□ 0.17
CABP1-205ENST00000498082 SCRIBQ14160 1630 aa16.11■□□□□ 0.17
CABP1-205ENST00000498082 ERICH6Q7L0X2 663 aa16.06■□□□□ 0.16
CABP1-205ENST00000498082 TNIKQ9UKE5 1360 aa16.03■□□□□ 0.16
CABP1-205ENST00000498082 RBM19Q9Y4C8 960 aaKnown RBP16.02■□□□□ 0.16
CABP1-205ENST00000498082 UBTFP17480 764 aaKnown RBP16.01■□□□□ 0.15
CABP1-205ENST00000498082 FKBP8Q14318 412 aa15.98■□□□□ 0.15
CABP1-205ENST00000498082 CECR2Q9BXF3 1484 aa15.98■□□□□ 0.15
CABP1-205ENST00000498082 KCNH8Q96L42 1107 aa15.97■□□□□ 0.15
CABP1-205ENST00000498082 APLP2Q06481 763 aa15.97■□□□□ 0.15
CABP1-205ENST00000498082 CCDC88BA6NC98 1476 aa15.97■□□□□ 0.15
CABP1-205ENST00000498082 MROH2BQ7Z745 1585 aa15.95■□□□□ 0.14
CABP1-205ENST00000498082 SOGA1O94964 1423 aa15.94■□□□□ 0.14
CABP1-205ENST00000498082 ABCC8Q09428 1581 aa15.93■□□□□ 0.14
CABP1-205ENST00000498082 MSH5O43196 834 aa15.91■□□□□ 0.14
CABP1-205ENST00000498082 WIZO95785 1651 aa15.9■□□□□ 0.14
CABP1-205ENST00000498082 EIF4G1Q04637 1599 aaKnown RBP15.89■□□□□ 0.13
CABP1-205ENST00000498082 ITGAEP38570 1179 aa15.87■□□□□ 0.13
CABP1-205ENST00000498082 RUSC2Q8N2Y8 1516 aa15.84■□□□□ 0.13
CABP1-205ENST00000498082 DHX57Q6P158 1386 aaKnown RBP15.82■□□□□ 0.12
CABP1-205ENST00000498082 NEFLP07196 543 aa15.79■□□□□ 0.12
CABP1-205ENST00000498082 GOLGA3Q08378 1498 aa15.78■□□□□ 0.12
CABP1-205ENST00000498082 EEA1Q15075 1411 aa15.74■□□□□ 0.11
CABP1-205ENST00000498082 BAZ1AQ9NRL2 1556 aaPredicted RBP15.73■□□□□ 0.11
CABP1-205ENST00000498082 CLIP1P30622 1438 aa15.71■□□□□ 0.11
CABP1-205ENST00000498082 TRIM52Q96A61 297 aa15.69■□□□□ 0.1
CABP1-205ENST00000498082 FANCIQ9NVI1 1328 aa15.69■□□□□ 0.1
CABP1-205ENST00000498082 VPS8Q8N3P4 1428 aa15.69■□□□□ 0.1
CABP1-205ENST00000498082 RANGAP1P46060 587 aaPredicted RBP15.68■□□□□ 0.1
CABP1-205ENST00000498082 DDX10Q13206 875 aaKnown RBP15.67■□□□□ 0.1
CABP1-205ENST00000498082 DEKP35659 375 aaKnown RBP15.66■□□□□ 0.1
CABP1-205ENST00000498082 NACADO15069 1562 aa15.64■□□□□ 0.09
CABP1-205ENST00000498082 ANO8Q9HCE9 1232 aaPredicted RBP15.62■□□□□ 0.09
CABP1-205ENST00000498082 CDK11AQ9UQ88 783 aaPredicted RBP15.6■□□□□ 0.09
CABP1-205ENST00000498082 CEP164Q9UPV0 1460 aa15.59■□□□□ 0.09
CABP1-205ENST00000498082 MYT1LQ9UL68 1186 aa15.58■□□□□ 0.08
CABP1-205ENST00000498082 IRX6P78412 446 aaPredicted RBP15.56■□□□□ 0.08
CABP1-205ENST00000498082 TOP2AP11388 1531 aaKnown RBP15.53■□□□□ 0.08
CABP1-205ENST00000498082 SMARCA2P51531 1590 aa15.52■□□□□ 0.08
CABP1-205ENST00000498082 PPP1R15AO75807 674 aaPredicted RBP15.52■□□□□ 0.07
CABP1-205ENST00000498082 KANK4Q5T7N3 995 aaPredicted RBP15.52■□□□□ 0.07
CABP1-205ENST00000498082 KIF21BO75037 1637 aa15.51■□□□□ 0.07
CABP1-205ENST00000498082 HIRIP3Q9BW71 556 aaPredicted RBP15.5■□□□□ 0.07
CABP1-205ENST00000498082 CCER2I3L3R5 266 aa15.49■□□□□ 0.07
CABP1-205ENST00000498082 ANP32CO43423 234 aa15.48■□□□□ 0.07
CABP1-205ENST00000498082 NBR1Q14596 966 aa15.48■□□□□ 0.07
CABP1-205ENST00000498082 RAPGEF2Q9Y4G8 1499 aa15.47■□□□□ 0.07
CABP1-205ENST00000498082 SALL2Q9Y467 1007 aaPredicted RBP15.46■□□□□ 0.07
CABP1-205ENST00000498082 PABPN1Q86U42 306 aaKnown RBP eCLIP15.43■□□□□ 0.06
CABP1-205ENST00000498082 WDR97A6NE52 1622 aa15.43■□□□□ 0.06
CABP1-205ENST00000498082 BAZ1BQ9UIG0 1483 aaKnown RBP15.42■□□□□ 0.06
CABP1-205ENST00000498082 CUX2O14529 1486 aa15.42■□□□□ 0.06
CABP1-205ENST00000498082 SIN3AQ96ST3 1273 aa15.42■□□□□ 0.06
CABP1-205ENST00000498082 RRBP1Q9P2E9 1410 aaKnown RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms