RNA–Protein interactions for RNA: ENST00000497055.1

SGIP1-214, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 2

Gene SGIP1, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-214ENST00000497055 AEBP2Q6ZN18 517 aaPredicted RBP17.99■□□□□ 0.47
SGIP1-214ENST00000497055 CHIC1Q5VXU3 224 aa17.61■□□□□ 0.41
SGIP1-214ENST00000497055 PHF23Q9BUL5 403 aaPredicted RBP15.48■□□□□ 0.07
SGIP1-214ENST00000497055 SENP3Q9H4L4 574 aaPredicted RBP15.28■□□□□ 0.04
SGIP1-214ENST00000497055 PLPPR3Q6T4P5 718 aa14.32□□□□□ -0.12
SGIP1-214ENST00000497055 FOXD1Q16676 465 aa14.17□□□□□ -0.14
SGIP1-214ENST00000497055 PPP6R1Q9UPN7 881 aa13.66□□□□□ -0.22
SGIP1-214ENST00000497055 ADRA2BP18089 450 aa13.64□□□□□ -0.23
SGIP1-214ENST00000497055 PIAS4Q8N2W9 510 aaPredicted RBP13.36□□□□□ -0.27
SGIP1-214ENST00000497055 MSH5O43196 834 aa13.07□□□□□ -0.32
SGIP1-214ENST00000497055 PPP4R3CPQ6ZMV5 832 aa12.61□□□□□ -0.39
SGIP1-214ENST00000497055 SCAF1Q9H7N4 1312 aaKnown RBP12.52□□□□□ -0.41
SGIP1-214ENST00000497055 MAPK8IP2Q13387 824 aaPredicted RBP12.37□□□□□ -0.43
SGIP1-214ENST00000497055 KCNA4P22459 653 aa12.33□□□□□ -0.44
SGIP1-214ENST00000497055 NCBP3Q53F19 620 aaKnown RBP12.31□□□□□ -0.44
SGIP1-214ENST00000497055 CNKSR2Q8WXI2 1034 aa12.27□□□□□ -0.45
SGIP1-214ENST00000497055 DMRT2Q9Y5R5 561 aa12.2□□□□□ -0.46
SGIP1-214ENST00000497055 NPM3O75607 178 aaKnown RBP12.1□□□□□ -0.47
SGIP1-214ENST00000497055 RNF216Q9NWF9 866 aaPredicted RBP12.02□□□□□ -0.49
SGIP1-214ENST00000497055 HOXD11P31277 338 aaPredicted RBP11.96□□□□□ -0.49
SGIP1-214ENST00000497055 DNAJC5BQ9UF47 199 aa11.93□□□□□ -0.5
SGIP1-214ENST00000497055 ABCC9O60706 1549 aa11.87□□□□□ -0.51
SGIP1-214ENST00000497055 POTEDQ86YR6 584 aa11.85□□□□□ -0.51
SGIP1-214ENST00000497055 SLC4A1APQ9BWU0 796 aaKnown RBP11.75□□□□□ -0.53
SGIP1-214ENST00000497055 NISCHQ9Y2I1 1504 aa11.74□□□□□ -0.53
SGIP1-214ENST00000497055 DCAF8L1A6NGE4 600 aa11.66□□□□□ -0.54
SGIP1-214ENST00000497055 DNAJC5Q9H3Z4 198 aa11.59□□□□□ -0.55
SGIP1-214ENST00000497055 SLC4A2P04920 1241 aa11.42□□□□□ -0.58
SGIP1-214ENST00000497055 EHMT2Q96KQ7 1210 aa11.41□□□□□ -0.58
SGIP1-214ENST00000497055 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.4□□□□□ -0.58
SGIP1-214ENST00000497055 FOXD4L1Q9NU39 408 aa11.34□□□□□ -0.59
SGIP1-214ENST00000497055 ZBTB22O15209 634 aa11.33□□□□□ -0.6
SGIP1-214ENST00000497055 CSRNP3Q8WYN3 585 aa11.31□□□□□ -0.6
SGIP1-214ENST00000497055 RNF39Q9H2S5 420 aa11.2□□□□□ -0.62
SGIP1-214ENST00000497055 U3KPZ7 1027 aaPredicted RBP11.2□□□□□ -0.62
SGIP1-214ENST00000497055 MYCNP04198 464 aaPredicted RBP11.18□□□□□ -0.62
SGIP1-214ENST00000497055 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.1□□□□□ -0.63
SGIP1-214ENST00000497055 HNRNPUL2Q1KMD3 747 aaKnown RBP11.1□□□□□ -0.63
SGIP1-214ENST00000497055 C1QBPQ07021 282 aaKnown RBP11.08□□□□□ -0.64
SGIP1-214ENST00000497055 SAMD1Q6SPF0 538 aaPredicted RBP11.05□□□□□ -0.64
SGIP1-214ENST00000497055 ATXN8OSP0DMR3 200 aa10.98□□□□□ -0.65
SGIP1-214ENST00000497055 APLP2Q06481 763 aa10.98□□□□□ -0.65
SGIP1-214ENST00000497055 PABPN1Q86U42 306 aaKnown RBP eCLIP10.94□□□□□ -0.66
SGIP1-214ENST00000497055 CACNB1Q02641 598 aaPredicted RBP10.89□□□□□ -0.67
SGIP1-214ENST00000497055 SPINK5Q9NQ38 1064 aaPredicted RBP10.88□□□□□ -0.67
SGIP1-214ENST00000497055 CCDC180Q9P1Z9 1646 aa10.87□□□□□ -0.67
SGIP1-214ENST00000497055 ATF5Q9Y2D1 282 aaPredicted RBP10.87□□□□□ -0.67
SGIP1-214ENST00000497055 CAPN15O75808 1086 aa10.84□□□□□ -0.67
SGIP1-214ENST00000497055 RB1CC1Q8TDY2 1594 aa10.83□□□□□ -0.68
SGIP1-214ENST00000497055 TRHP20396 242 aaPredicted RBP10.8□□□□□ -0.68
SGIP1-214ENST00000497055 TRIM41Q8WV44 630 aa10.8□□□□□ -0.68
SGIP1-214ENST00000497055 ZNF219Q9P2Y4 722 aaPredicted RBP10.8□□□□□ -0.68
SGIP1-214ENST00000497055 CECR2Q9BXF3 1484 aa10.76□□□□□ -0.69
SGIP1-214ENST00000497055 DSG3P32926 999 aa10.66□□□□□ -0.7
SGIP1-214ENST00000497055 POLA2Q14181 598 aa10.65□□□□□ -0.7
SGIP1-214ENST00000497055 ABCB7O75027 752 aa10.63□□□□□ -0.71
SGIP1-214ENST00000497055 CC2D2AQ9P2K1 1620 aa10.62□□□□□ -0.71
SGIP1-214ENST00000497055 BICRAQ9NZM4 1560 aa10.54□□□□□ -0.72
SGIP1-214ENST00000497055 UNC13AQ9UPW8 1703 aa10.54□□□□□ -0.72
SGIP1-214ENST00000497055 CUX2O14529 1486 aa10.53□□□□□ -0.72
SGIP1-214ENST00000497055 NACADO15069 1562 aa10.52□□□□□ -0.73
SGIP1-214ENST00000497055 ZBTB12Q9Y330 459 aaPredicted RBP10.47□□□□□ -0.73
SGIP1-214ENST00000497055 DCAF8L2P0C7V8 631 aa10.45□□□□□ -0.74
SGIP1-214ENST00000497055 FBLN2P98095 1184 aa10.44□□□□□ -0.74
SGIP1-214ENST00000497055 MKRN4PQ13434 485 aaPredicted RBP10.4□□□□□ -0.74
SGIP1-214ENST00000497055 EIF4G1Q04637 1599 aaKnown RBP10.37□□□□□ -0.75
SGIP1-214ENST00000497055 ERCC6Q03468 1493 aa10.31□□□□□ -0.76
SGIP1-214ENST00000497055 SHROOM4Q9ULL8 1493 aa10.26□□□□□ -0.77
SGIP1-214ENST00000497055 OSCARQ8IYS5 282 aa10.25□□□□□ -0.77
SGIP1-214ENST00000497055 FKBP8Q14318 412 aa10.21□□□□□ -0.77
SGIP1-214ENST00000497055 SPDYE4A6NLX3 237 aa10.2□□□□□ -0.78
SGIP1-214ENST00000497055 SPDYE2BA6NHP3 402 aa10.19□□□□□ -0.78
SGIP1-214ENST00000497055 SPDYE6P0CI01 402 aa10.19□□□□□ -0.78
SGIP1-214ENST00000497055 SPDYE2Q495Y8 402 aa10.19□□□□□ -0.78
SGIP1-214ENST00000497055 RBM42Q9BTD8 480 aaKnown RBP10.17□□□□□ -0.78
SGIP1-214ENST00000497055 ZNF692Q9BU19 519 aaPredicted RBP10.16□□□□□ -0.78
SGIP1-214ENST00000497055 ILDR1Q86SU0 546 aaPredicted RBP10.13□□□□□ -0.79
SGIP1-214ENST00000497055 SSUH2Q9Y2M2 353 aa10.1□□□□□ -0.79
SGIP1-214ENST00000497055 AKT1S1Q96B36 256 aa10.05□□□□□ -0.8
SGIP1-214ENST00000497055 MYO15BQ96JP2 1530 aa10.02□□□□□ -0.8
SGIP1-214ENST00000497055 PROM2Q8N271 834 aa10.02□□□□□ -0.81
SGIP1-214ENST00000497055 SCRIBQ14160 1630 aa9.99□□□□□ -0.81
SGIP1-214ENST00000497055 REM2Q8IYK8 340 aaPredicted RBP9.95□□□□□ -0.82
SGIP1-214ENST00000497055 THOC2Q8NI27 1593 aaKnown RBP9.95□□□□□ -0.82
SGIP1-214ENST00000497055 NESP48681 1621 aa9.93□□□□□ -0.82
SGIP1-214ENST00000497055 RIMBP3CA6NJZ7 1639 aa9.89□□□□□ -0.83
SGIP1-214ENST00000497055 RIMBP3BA6NNM3 1639 aa9.89□□□□□ -0.83
SGIP1-214ENST00000497055 RIMBP3Q9UFD9 1639 aa9.89□□□□□ -0.83
SGIP1-214ENST00000497055 BAZ1AQ9NRL2 1556 aaPredicted RBP9.89□□□□□ -0.83
SGIP1-214ENST00000497055 SPDYE1Q8NFV5 336 aaPredicted RBP9.88□□□□□ -0.83
SGIP1-214ENST00000497055 FBXO3Q9UK99 471 aa9.88□□□□□ -0.83
SGIP1-214ENST00000497055 STAG3Q9UJ98 1225 aa9.87□□□□□ -0.83
SGIP1-214ENST00000497055 SMARCA2P51531 1590 aa9.87□□□□□ -0.83
SGIP1-214ENST00000497055 PITPNM1O00562 1244 aa9.82□□□□□ -0.84
SGIP1-214ENST00000497055 CYB5RLQ6IPT4 315 aa9.82□□□□□ -0.84
SGIP1-214ENST00000497055 CLEC11AQ9Y240 323 aa9.82□□□□□ -0.84
SGIP1-214ENST00000497055 ARHGEF11O15085 1522 aa9.78□□□□□ -0.84
SGIP1-214ENST00000497055 PRR29P0C7W0 189 aa9.76□□□□□ -0.85
SGIP1-214ENST00000497055 NCAPD3P42695 1498 aa9.73□□□□□ -0.85
SGIP1-214ENST00000497055 CHRDL2Q6WN34 429 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms