RNA–Protein interactions for RNA: ENST00000495965.1

ATP1A1-210, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 417 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-210ENST00000495965 CHIC1Q5VXU3 224 aa17.26■□□□□ 0.35
ATP1A1-210ENST00000495965 AEBP2Q6ZN18 517 aaPredicted RBP17.16■□□□□ 0.34
ATP1A1-210ENST00000495965 PHF23Q9BUL5 403 aaPredicted RBP15.16■□□□□ 0.02
ATP1A1-210ENST00000495965 SENP3Q9H4L4 574 aaPredicted RBP14.64□□□□□ -0.07
ATP1A1-210ENST00000495965 PLPPR3Q6T4P5 718 aa14.27□□□□□ -0.13
ATP1A1-210ENST00000495965 NISCHQ9Y2I1 1504 aa14.13□□□□□ -0.15
ATP1A1-210ENST00000495965 FOXD1Q16676 465 aa13.44□□□□□ -0.26
ATP1A1-210ENST00000495965 ADRA2BP18089 450 aa13.29□□□□□ -0.28
ATP1A1-210ENST00000495965 PPP6R1Q9UPN7 881 aa13.24□□□□□ -0.29
ATP1A1-210ENST00000495965 PIAS4Q8N2W9 510 aaPredicted RBP12.83□□□□□ -0.36
ATP1A1-210ENST00000495965 KCNA4P22459 653 aa12.73□□□□□ -0.37
ATP1A1-210ENST00000495965 PPP4R3CPQ6ZMV5 832 aa12.59□□□□□ -0.39
ATP1A1-210ENST00000495965 NCBP3Q53F19 620 aaKnown RBP12.49□□□□□ -0.41
ATP1A1-210ENST00000495965 CCDC180Q9P1Z9 1646 aa12.43□□□□□ -0.42
ATP1A1-210ENST00000495965 EHMT2Q96KQ7 1210 aa12.36□□□□□ -0.43
ATP1A1-210ENST00000495965 MSH5O43196 834 aa12.34□□□□□ -0.43
ATP1A1-210ENST00000495965 SCAF1Q9H7N4 1312 aaKnown RBP12.33□□□□□ -0.44
ATP1A1-210ENST00000495965 SLC4A1APQ9BWU0 796 aaKnown RBP12.27□□□□□ -0.45
ATP1A1-210ENST00000495965 CNKSR2Q8WXI2 1034 aa12.18□□□□□ -0.46
ATP1A1-210ENST00000495965 NPM3O75607 178 aaKnown RBP12.17□□□□□ -0.46
ATP1A1-210ENST00000495965 CSRNP3Q8WYN3 585 aa12□□□□□ -0.49
ATP1A1-210ENST00000495965 MAPK8IP2Q13387 824 aaPredicted RBP11.92□□□□□ -0.5
ATP1A1-210ENST00000495965 ZCCHC6Q5VYS8 1495 aaKnown RBP11.9□□□□□ -0.5
ATP1A1-210ENST00000495965 RNF216Q9NWF9 866 aaPredicted RBP11.82□□□□□ -0.52
ATP1A1-210ENST00000495965 DNAJC5BQ9UF47 199 aa11.78□□□□□ -0.52
ATP1A1-210ENST00000495965 DMRT2Q9Y5R5 561 aa11.71□□□□□ -0.53
ATP1A1-210ENST00000495965 DCAF1Q9Y4B6 1507 aa11.7□□□□□ -0.54
ATP1A1-210ENST00000495965 POTEDQ86YR6 584 aa11.69□□□□□ -0.54
ATP1A1-210ENST00000495965 ZBTB22O15209 634 aa11.65□□□□□ -0.54
ATP1A1-210ENST00000495965 FOXD4L1Q9NU39 408 aa11.65□□□□□ -0.54
ATP1A1-210ENST00000495965 HOXD11P31277 338 aaPredicted RBP11.63□□□□□ -0.55
ATP1A1-210ENST00000495965 ABCC9O60706 1549 aa11.58□□□□□ -0.56
ATP1A1-210ENST00000495965 DCAF8L2P0C7V8 631 aa11.56□□□□□ -0.56
ATP1A1-210ENST00000495965 MYO15BQ96JP2 1530 aa11.54□□□□□ -0.56
ATP1A1-210ENST00000495965 SHROOM4Q9ULL8 1493 aa11.52□□□□□ -0.56
ATP1A1-210ENST00000495965 NACADO15069 1562 aa11.48□□□□□ -0.57
ATP1A1-210ENST00000495965 RB1CC1Q8TDY2 1594 aa11.39□□□□□ -0.59
ATP1A1-210ENST00000495965 SCRIBQ14160 1630 aa11.38□□□□□ -0.59
ATP1A1-210ENST00000495965 SLC4A2P04920 1241 aa11.35□□□□□ -0.59
ATP1A1-210ENST00000495965 UNC13AQ9UPW8 1703 aa11.29□□□□□ -0.6
ATP1A1-210ENST00000495965 MYCNP04198 464 aaPredicted RBP11.29□□□□□ -0.6
ATP1A1-210ENST00000495965 ATXN8OSP0DMR3 200 aa11.26□□□□□ -0.61
ATP1A1-210ENST00000495965 DCAF8L1A6NGE4 600 aa11.24□□□□□ -0.61
ATP1A1-210ENST00000495965 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.17□□□□□ -0.62
ATP1A1-210ENST00000495965 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.1□□□□□ -0.63
ATP1A1-210ENST00000495965 HNRNPUL2Q1KMD3 747 aaKnown RBP11.1□□□□□ -0.63
ATP1A1-210ENST00000495965 SUPT5HO00267 1087 aaKnown RBP11.07□□□□□ -0.64
ATP1A1-210ENST00000495965 SAMD1Q6SPF0 538 aaPredicted RBP11.04□□□□□ -0.64
ATP1A1-210ENST00000495965 BICRAQ9NZM4 1560 aa11.03□□□□□ -0.64
ATP1A1-210ENST00000495965 CECR2Q9BXF3 1484 aa10.95□□□□□ -0.66
ATP1A1-210ENST00000495965 RSF1Q96T23 1441 aaPredicted RBP10.94□□□□□ -0.66
ATP1A1-210ENST00000495965 BAZ1AQ9NRL2 1556 aaPredicted RBP10.94□□□□□ -0.66
ATP1A1-210ENST00000495965 SMARCA4P51532 1647 aa10.92□□□□□ -0.66
ATP1A1-210ENST00000495965 MROH2BQ7Z745 1585 aa10.92□□□□□ -0.66
ATP1A1-210ENST00000495965 U3KPZ7 1027 aaPredicted RBP10.92□□□□□ -0.66
ATP1A1-210ENST00000495965 APLP2Q06481 763 aa10.91□□□□□ -0.66
ATP1A1-210ENST00000495965 WIZO95785 1651 aa10.9□□□□□ -0.66
ATP1A1-210ENST00000495965 FKBP8Q14318 412 aa10.87□□□□□ -0.67
ATP1A1-210ENST00000495965 PABPN1Q86U42 306 aaKnown RBP eCLIP10.86□□□□□ -0.67
ATP1A1-210ENST00000495965 ATF5Q9Y2D1 282 aaPredicted RBP10.85□□□□□ -0.67
ATP1A1-210ENST00000495965 TOP2AP11388 1531 aaKnown RBP10.76□□□□□ -0.69
ATP1A1-210ENST00000495965 PEG3Q9GZU2 1588 aa10.76□□□□□ -0.69
ATP1A1-210ENST00000495965 ZNF219Q9P2Y4 722 aaPredicted RBP10.74□□□□□ -0.69
ATP1A1-210ENST00000495965 AMER1Q5JTC6 1135 aaPredicted RBP10.7□□□□□ -0.7
ATP1A1-210ENST00000495965 SMARCA2P51531 1590 aa10.69□□□□□ -0.7
ATP1A1-210ENST00000495965 EIF4G1Q04637 1599 aaKnown RBP10.69□□□□□ -0.7
ATP1A1-210ENST00000495965 ATAD2BQ9ULI0 1458 aa10.65□□□□□ -0.7
ATP1A1-210ENST00000495965 BAZ1BQ9UIG0 1483 aaKnown RBP10.61□□□□□ -0.71
ATP1A1-210ENST00000495965 HMGXB3Q12766 1538 aa10.6□□□□□ -0.71
ATP1A1-210ENST00000495965 CCDC88BA6NC98 1476 aa10.6□□□□□ -0.71
ATP1A1-210ENST00000495965 RTN4Q9NQC3 1192 aaKnown RBP10.59□□□□□ -0.71
ATP1A1-210ENST00000495965 TRHP20396 242 aaPredicted RBP10.56□□□□□ -0.72
ATP1A1-210ENST00000495965 FBLN2P98095 1184 aa10.54□□□□□ -0.72
ATP1A1-210ENST00000495965 RNF39Q9H2S5 420 aa10.54□□□□□ -0.72
ATP1A1-210ENST00000495965 CC2D2AQ9P2K1 1620 aa10.54□□□□□ -0.72
ATP1A1-210ENST00000495965 NCAPD3P42695 1498 aa10.53□□□□□ -0.72
ATP1A1-210ENST00000495965 C1QBPQ07021 282 aaKnown RBP10.52□□□□□ -0.73
ATP1A1-210ENST00000495965 CAPN15O75808 1086 aa10.51□□□□□ -0.73
ATP1A1-210ENST00000495965 PRDM2Q13029 1718 aa10.5□□□□□ -0.73
ATP1A1-210ENST00000495965 SPDYE4A6NLX3 237 aa10.48□□□□□ -0.73
ATP1A1-210ENST00000495965 POLA2Q14181 598 aa10.48□□□□□ -0.73
ATP1A1-210ENST00000495965 SPINK5Q9NQ38 1064 aaPredicted RBP10.48□□□□□ -0.73
ATP1A1-210ENST00000495965 FBXO3Q9UK99 471 aa10.48□□□□□ -0.73
ATP1A1-210ENST00000495965 ABCC8Q09428 1581 aa10.43□□□□□ -0.74
ATP1A1-210ENST00000495965 ZBTB12Q9Y330 459 aaPredicted RBP10.41□□□□□ -0.74
ATP1A1-210ENST00000495965 MKRN4PQ13434 485 aaPredicted RBP10.4□□□□□ -0.74
ATP1A1-210ENST00000495965 TRIM41Q8WV44 630 aa10.4□□□□□ -0.74
ATP1A1-210ENST00000495965 SYNJ1O43426 1573 aa10.33□□□□□ -0.76
ATP1A1-210ENST00000495965 BIVM-ERCC5R4GMW8 1640 aa10.33□□□□□ -0.76
ATP1A1-210ENST00000495965 CFTRP13569 1480 aa10.32□□□□□ -0.76
ATP1A1-210ENST00000495965 SLC24A1O60721 1099 aa10.32□□□□□ -0.76
ATP1A1-210ENST00000495965 WRNQ14191 1432 aaPredicted RBP eCLIP10.32□□□□□ -0.76
ATP1A1-210ENST00000495965 TOP2BQ02880 1626 aa10.29□□□□□ -0.76
ATP1A1-210ENST00000495965 ABCB7O75027 752 aa10.29□□□□□ -0.76
ATP1A1-210ENST00000495965 PROM2Q8N271 834 aa10.29□□□□□ -0.76
ATP1A1-210ENST00000495965 LAMC3Q9Y6N6 1575 aa10.25□□□□□ -0.77
ATP1A1-210ENST00000495965 CADPSQ9ULU8 1353 aa10.25□□□□□ -0.77
ATP1A1-210ENST00000495965 CUX1P39880 1505 aa10.23□□□□□ -0.77
ATP1A1-210ENST00000495965 VASPP50552 380 aaPredicted RBP10.21□□□□□ -0.77
ATP1A1-210ENST00000495965 FAM9AQ8IZU1 332 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms