RNA–Protein interactions for RNA: ENST00000494120.1

C1orf109-211, Transcript of chromosome 1 open reading frame 109, humanhuman

TSL 1 (best)

Gene C1orf109, Length 2,570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf109-211ENST00000494120 NISCHQ9Y2I1 1504 aa30.61■■■□□ 2.49
C1orf109-211ENST00000494120 SHROOM4Q9ULL8 1493 aa26.45■■□□□ 1.82
C1orf109-211ENST00000494120 SUPT5HO00267 1087 aaKnown RBP26.1■■□□□ 1.77
C1orf109-211ENST00000494120 ZCCHC6Q5VYS8 1495 aaKnown RBP25.93■■□□□ 1.74
C1orf109-211ENST00000494120 CCDC180Q9P1Z9 1646 aa25.76■■□□□ 1.71
C1orf109-211ENST00000494120 DCAF8L2P0C7V8 631 aa25.49■■□□□ 1.67
C1orf109-211ENST00000494120 CHIC1Q5VXU3 224 aa25.49■■□□□ 1.67
C1orf109-211ENST00000494120 MYO15BQ96JP2 1530 aa25.42■■□□□ 1.66
C1orf109-211ENST00000494120 HRCP23327 699 aa25.2■■□□□ 1.63
C1orf109-211ENST00000494120 DCAF1Q9Y4B6 1507 aa25.05■■□□□ 1.6
C1orf109-211ENST00000494120 PCGF6Q9BYE7 350 aa25.04■■□□□ 1.6
C1orf109-211ENST00000494120 LOC105371045A0A1W2PR82 267 aa24.8■■□□□ 1.56
C1orf109-211ENST00000494120 PPARGC1BQ86YN6 1023 aaKnown RBP24.68■■□□□ 1.54
C1orf109-211ENST00000494120 ABCC9O60706 1549 aa24.49■■□□□ 1.51
C1orf109-211ENST00000494120 TRIM26Q12899 539 aaPredicted RBP24.45■■□□□ 1.5
C1orf109-211ENST00000494120 RSF1Q96T23 1441 aaPredicted RBP24.39■■□□□ 1.5
C1orf109-211ENST00000494120 SCRIBQ14160 1630 aa24.32■■□□□ 1.48
C1orf109-211ENST00000494120 TRIM41Q8WV44 630 aa24.27■■□□□ 1.48
C1orf109-211ENST00000494120 RB1CC1Q8TDY2 1594 aa24.13■■□□□ 1.45
C1orf109-211ENST00000494120 FAM9AQ8IZU1 332 aaPredicted RBP24.12■■□□□ 1.45
C1orf109-211ENST00000494120 ZEB1P37275 1124 aaPredicted RBP24.01■■□□□ 1.43
C1orf109-211ENST00000494120 EHMT2Q96KQ7 1210 aa23.95■■□□□ 1.42
C1orf109-211ENST00000494120 CECR2Q9BXF3 1484 aa23.92■■□□□ 1.42
C1orf109-211ENST00000494120 MROH2BQ7Z745 1585 aa23.84■■□□□ 1.41
C1orf109-211ENST00000494120 NACADO15069 1562 aa23.82■■□□□ 1.4
C1orf109-211ENST00000494120 WIZO95785 1651 aa23.7■■□□□ 1.38
C1orf109-211ENST00000494120 BAZ1AQ9NRL2 1556 aaPredicted RBP23.53■■□□□ 1.36
C1orf109-211ENST00000494120 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.46■■□□□ 1.35
C1orf109-211ENST00000494120 EIF4G1Q04637 1599 aaKnown RBP23.45■■□□□ 1.34
C1orf109-211ENST00000494120 SCAF1Q9H7N4 1312 aaKnown RBP23.42■■□□□ 1.34
C1orf109-211ENST00000494120 CCER1Q8TC90 406 aaPredicted RBP23.4■■□□□ 1.34
C1orf109-211ENST00000494120 CCDC88BA6NC98 1476 aa23.32■■□□□ 1.32
C1orf109-211ENST00000494120 ABCC8Q09428 1581 aa23.32■■□□□ 1.32
C1orf109-211ENST00000494120 TOP2AP11388 1531 aaKnown RBP23.3■■□□□ 1.32
C1orf109-211ENST00000494120 TTBK1Q5TCY1 1321 aaPredicted RBP23.24■■□□□ 1.31
C1orf109-211ENST00000494120 WRNQ14191 1432 aaPredicted RBP eCLIP23.23■■□□□ 1.31
C1orf109-211ENST00000494120 SMARCA4P51532 1647 aa23.22■■□□□ 1.31
C1orf109-211ENST00000494120 PELP1Q8IZL8 1130 aaKnown RBP23.21■■□□□ 1.31
C1orf109-211ENST00000494120 CEP162Q5TB80 1403 aa23.21■■□□□ 1.31
C1orf109-211ENST00000494120 SOGA1O94964 1423 aa23.21■■□□□ 1.31
C1orf109-211ENST00000494120 SMARCA2P51531 1590 aa23.2■■□□□ 1.3
C1orf109-211ENST00000494120 TNIKQ9UKE5 1360 aa23.14■■□□□ 1.29
C1orf109-211ENST00000494120 CSRNP3Q8WYN3 585 aa23.12■■□□□ 1.29
C1orf109-211ENST00000494120 DIEXFQ68CQ4 756 aaKnown RBP23.1■■□□□ 1.29
C1orf109-211ENST00000494120 ACIN1Q9UKV3 1341 aaKnown RBP23.09■■□□□ 1.29
C1orf109-211ENST00000494120 UBTFP17480 764 aaKnown RBP23.08■■□□□ 1.29
C1orf109-211ENST00000494120 RUSC2Q8N2Y8 1516 aa23.07■■□□□ 1.28
C1orf109-211ENST00000494120 NEUROD1Q13562 356 aa23.05■■□□□ 1.28
C1orf109-211ENST00000494120 EEA1Q15075 1411 aa23.05■■□□□ 1.28
C1orf109-211ENST00000494120 UNC13AQ9UPW8 1703 aa22.99■■□□□ 1.27
C1orf109-211ENST00000494120 GOLGA3Q08378 1498 aa22.93■■□□□ 1.26
C1orf109-211ENST00000494120 PABPN1Q86U42 306 aaKnown RBP eCLIP22.91■■□□□ 1.26
C1orf109-211ENST00000494120 CENPBP07199 599 aaPredicted RBP22.9■■□□□ 1.26
C1orf109-211ENST00000494120 GTF3C3Q9Y5Q9 886 aa22.86■■□□□ 1.25
C1orf109-211ENST00000494120 ZNF316A6NFI3 1004 aaPredicted RBP22.83■■□□□ 1.25
C1orf109-211ENST00000494120 CEP164Q9UPV0 1460 aa22.77■■□□□ 1.24
C1orf109-211ENST00000494120 HNRNPUL2Q1KMD3 747 aaKnown RBP22.76■■□□□ 1.23
C1orf109-211ENST00000494120 BICRAQ9NZM4 1560 aa22.76■■□□□ 1.23
C1orf109-211ENST00000494120 SYNJ1O43426 1573 aa22.74■■□□□ 1.23
C1orf109-211ENST00000494120 PEG3Q9GZU2 1588 aa22.73■■□□□ 1.23
C1orf109-211ENST00000494120 CLIP1P30622 1438 aa22.72■■□□□ 1.23
C1orf109-211ENST00000494120 KIF21BO75037 1637 aa22.68■■□□□ 1.22
C1orf109-211ENST00000494120 VPS8Q8N3P4 1428 aa22.64■■□□□ 1.21
C1orf109-211ENST00000494120 APLP2Q06481 763 aa22.61■■□□□ 1.21
C1orf109-211ENST00000494120 YTHDC1Q96MU7 727 aaKnown RBP22.6■■□□□ 1.21
C1orf109-211ENST00000494120 ATAD2BQ9ULI0 1458 aa22.6■■□□□ 1.21
C1orf109-211ENST00000494120 RAPGEF2Q9Y4G8 1499 aa22.6■■□□□ 1.21
C1orf109-211ENST00000494120 RANGAP1P46060 587 aaPredicted RBP22.6■■□□□ 1.21
C1orf109-211ENST00000494120 MIER1Q8N108 512 aa22.58■■□□□ 1.21
C1orf109-211ENST00000494120 BAZ1BQ9UIG0 1483 aaKnown RBP22.57■■□□□ 1.2
C1orf109-211ENST00000494120 TOP2BQ02880 1626 aa22.4■■□□□ 1.18
C1orf109-211ENST00000494120 PRXQ9BXM0 1461 aa22.32■■□□□ 1.16
C1orf109-211ENST00000494120 KANK4Q5T7N3 995 aaPredicted RBP22.31■■□□□ 1.16
C1orf109-211ENST00000494120 CLSPNQ9HAW4 1339 aa22.3■■□□□ 1.16
C1orf109-211ENST00000494120 DHX57Q6P158 1386 aaKnown RBP22.3■■□□□ 1.16
C1orf109-211ENST00000494120 ARAP1Q96P48 1450 aa22.29■■□□□ 1.16
C1orf109-211ENST00000494120 ERICH3Q5RHP9 1530 aa22.28■■□□□ 1.16
C1orf109-211ENST00000494120 BIVM-ERCC5R4GMW8 1640 aa22.27■■□□□ 1.16
C1orf109-211ENST00000494120 CUX1P39880 1505 aa22.16■■□□□ 1.14
C1orf109-211ENST00000494120 KIF27Q86VH2 1401 aa22.16■■□□□ 1.14
C1orf109-211ENST00000494120 RRBP1Q9P2E9 1410 aaKnown RBP22.15■■□□□ 1.14
C1orf109-211ENST00000494120 NCAPD3P42695 1498 aa22.1■■□□□ 1.13
C1orf109-211ENST00000494120 CCNB3Q8WWL7 1395 aa22.08■■□□□ 1.12
C1orf109-211ENST00000494120 MYT1Q01538 1121 aa22.07■■□□□ 1.12
C1orf109-211ENST00000494120 ITGAEP38570 1179 aa22.06■■□□□ 1.12
C1orf109-211ENST00000494120 ARHGAP35Q9NRY4 1499 aa22.06■■□□□ 1.12
C1orf109-211ENST00000494120 HMGXB3Q12766 1538 aa22.05■■□□□ 1.12
C1orf109-211ENST00000494120 CUX2O14529 1486 aa22.04■■□□□ 1.12
C1orf109-211ENST00000494120 CFTRP13569 1480 aa22.02■■□□□ 1.12
C1orf109-211ENST00000494120 SUPT16HQ9Y5B9 1047 aaKnown RBP21.94■■□□□ 1.1
C1orf109-211ENST00000494120 IGF1RP08069 1367 aa21.93■■□□□ 1.1
C1orf109-211ENST00000494120 RAB3GAP2Q9H2M9 1393 aa21.93■■□□□ 1.1
C1orf109-211ENST00000494120 MAPKBP1O60336 1514 aa21.85■■□□□ 1.09
C1orf109-211ENST00000494120 TIAM1Q13009 1591 aa21.83■■□□□ 1.09
C1orf109-211ENST00000494120 CARMIL1Q5VZK9 1371 aa21.83■■□□□ 1.08
C1orf109-211ENST00000494120 KCNH8Q96L42 1107 aa21.82■■□□□ 1.08
C1orf109-211ENST00000494120 MAP3K1Q13233 1512 aa21.81■■□□□ 1.08
C1orf109-211ENST00000494120 SETD5Q9C0A6 1442 aa21.81■■□□□ 1.08
C1orf109-211ENST00000494120 PHLDB1Q86UU1 1377 aa21.79■■□□□ 1.08
C1orf109-211ENST00000494120 LRRC9Q6ZRR7 1453 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 174.5 ms