RNA–Protein interactions for RNA: ENST00000493453.1

AKAP9-214, Transcript of A-kinase anchoring protein 9, humanhuman

TSL 2

Gene AKAP9, Length 6,020 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AKAP9-214ENST00000493453 NISCHQ9Y2I1 1504 aa17.78■□□□□ 0.44
AKAP9-214ENST00000493453 DCAF8L2P0C7V8 631 aa15.5■□□□□ 0.07
AKAP9-214ENST00000493453 SHROOM4Q9ULL8 1493 aa15.38■□□□□ 0.05
AKAP9-214ENST00000493453 SUPT5HO00267 1087 aaKnown RBP15.27■□□□□ 0.04
AKAP9-214ENST00000493453 CCDC180Q9P1Z9 1646 aa15.22■□□□□ 0.03
AKAP9-214ENST00000493453 ZCCHC6Q5VYS8 1495 aaKnown RBP14.97□□□□□ -0.01
AKAP9-214ENST00000493453 DCAF1Q9Y4B6 1507 aa14.61□□□□□ -0.07
AKAP9-214ENST00000493453 CHIC1Q5VXU3 224 aa14.48□□□□□ -0.09
AKAP9-214ENST00000493453 TRIM41Q8WV44 630 aa14.39□□□□□ -0.11
AKAP9-214ENST00000493453 SCRIBQ14160 1630 aa14.29□□□□□ -0.12
AKAP9-214ENST00000493453 PCGF6Q9BYE7 350 aa14.29□□□□□ -0.12
AKAP9-214ENST00000493453 ZEB1P37275 1124 aaPredicted RBP14.27□□□□□ -0.12
AKAP9-214ENST00000493453 ABCC9O60706 1549 aa14.25□□□□□ -0.13
AKAP9-214ENST00000493453 NACADO15069 1562 aa14.24□□□□□ -0.13
AKAP9-214ENST00000493453 MYO15BQ96JP2 1530 aa14.23□□□□□ -0.13
AKAP9-214ENST00000493453 TRIM26Q12899 539 aaPredicted RBP14.16□□□□□ -0.14
AKAP9-214ENST00000493453 HRCP23327 699 aa14.15□□□□□ -0.14
AKAP9-214ENST00000493453 FAM9AQ8IZU1 332 aaPredicted RBP14.15□□□□□ -0.14
AKAP9-214ENST00000493453 RB1CC1Q8TDY2 1594 aa14.12□□□□□ -0.15
AKAP9-214ENST00000493453 EHMT2Q96KQ7 1210 aa14.05□□□□□ -0.16
AKAP9-214ENST00000493453 RSF1Q96T23 1441 aaPredicted RBP14.01□□□□□ -0.17
AKAP9-214ENST00000493453 APLP2Q06481 763 aa14.01□□□□□ -0.17
AKAP9-214ENST00000493453 LOC105371045A0A1W2PR82 267 aa14□□□□□ -0.17
AKAP9-214ENST00000493453 UBTFP17480 764 aaKnown RBP13.86□□□□□ -0.19
AKAP9-214ENST00000493453 BAZ1AQ9NRL2 1556 aaPredicted RBP13.86□□□□□ -0.19
AKAP9-214ENST00000493453 CCER1Q8TC90 406 aaPredicted RBP13.81□□□□□ -0.2
AKAP9-214ENST00000493453 EEA1Q15075 1411 aa13.68□□□□□ -0.22
AKAP9-214ENST00000493453 PABPN1Q86U42 306 aaKnown RBP eCLIP13.68□□□□□ -0.22
AKAP9-214ENST00000493453 MROH2BQ7Z745 1585 aa13.68□□□□□ -0.22
AKAP9-214ENST00000493453 CECR2Q9BXF3 1484 aa13.67□□□□□ -0.22
AKAP9-214ENST00000493453 TOP2AP11388 1531 aaKnown RBP13.65□□□□□ -0.22
AKAP9-214ENST00000493453 TTBK1Q5TCY1 1321 aaPredicted RBP13.64□□□□□ -0.23
AKAP9-214ENST00000493453 CENPBP07199 599 aaPredicted RBP13.63□□□□□ -0.23
AKAP9-214ENST00000493453 WIZO95785 1651 aa13.59□□□□□ -0.23
AKAP9-214ENST00000493453 CSRNP3Q8WYN3 585 aa13.58□□□□□ -0.23
AKAP9-214ENST00000493453 PPARGC1BQ86YN6 1023 aaKnown RBP13.56□□□□□ -0.24
AKAP9-214ENST00000493453 SMARCA4P51532 1647 aa13.56□□□□□ -0.24
AKAP9-214ENST00000493453 PELP1Q8IZL8 1130 aaKnown RBP13.53□□□□□ -0.24
AKAP9-214ENST00000493453 GOLGA3Q08378 1498 aa13.51□□□□□ -0.25
AKAP9-214ENST00000493453 RANGAP1P46060 587 aaPredicted RBP13.51□□□□□ -0.25
AKAP9-214ENST00000493453 BAZ1BQ9UIG0 1483 aaKnown RBP13.5□□□□□ -0.25
AKAP9-214ENST00000493453 CCDC88BA6NC98 1476 aa13.49□□□□□ -0.25
AKAP9-214ENST00000493453 SMARCA2P51531 1590 aa13.48□□□□□ -0.25
AKAP9-214ENST00000493453 TNIKQ9UKE5 1360 aa13.46□□□□□ -0.25
AKAP9-214ENST00000493453 WRNQ14191 1432 aaPredicted RBP eCLIP13.46□□□□□ -0.25
AKAP9-214ENST00000493453 CEP162Q5TB80 1403 aa13.42□□□□□ -0.26
AKAP9-214ENST00000493453 CEP164Q9UPV0 1460 aa13.42□□□□□ -0.26
AKAP9-214ENST00000493453 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.41□□□□□ -0.26
AKAP9-214ENST00000493453 ABCC8Q09428 1581 aa13.34□□□□□ -0.27
AKAP9-214ENST00000493453 HNRNPUL2Q1KMD3 747 aaKnown RBP13.33□□□□□ -0.27
AKAP9-214ENST00000493453 CLIP1P30622 1438 aa13.32□□□□□ -0.28
AKAP9-214ENST00000493453 DIEXFQ68CQ4 756 aaKnown RBP13.31□□□□□ -0.28
AKAP9-214ENST00000493453 ATP1B4Q9UN42 357 aaPredicted RBP13.31□□□□□ -0.28
AKAP9-214ENST00000493453 ATAD2BQ9ULI0 1458 aa13.25□□□□□ -0.29
AKAP9-214ENST00000493453 SOGA1O94964 1423 aa13.25□□□□□ -0.29
AKAP9-214ENST00000493453 ZNF316A6NFI3 1004 aaPredicted RBP13.23□□□□□ -0.29
AKAP9-214ENST00000493453 KIF27Q86VH2 1401 aa13.23□□□□□ -0.29
AKAP9-214ENST00000493453 UNC13AQ9UPW8 1703 aa13.15□□□□□ -0.3
AKAP9-214ENST00000493453 PEG3Q9GZU2 1588 aa13.14□□□□□ -0.31
AKAP9-214ENST00000493453 VPS8Q8N3P4 1428 aa13.14□□□□□ -0.31
AKAP9-214ENST00000493453 KIF21BO75037 1637 aa13.14□□□□□ -0.31
AKAP9-214ENST00000493453 YTHDC1Q96MU7 727 aaKnown RBP13.13□□□□□ -0.31
AKAP9-214ENST00000493453 ITGAEP38570 1179 aa13.12□□□□□ -0.31
AKAP9-214ENST00000493453 EIF4G1Q04637 1599 aaKnown RBP13.09□□□□□ -0.31
AKAP9-214ENST00000493453 MYT1Q01538 1121 aa13.08□□□□□ -0.32
AKAP9-214ENST00000493453 BICRAQ9NZM4 1560 aa13.08□□□□□ -0.32
AKAP9-214ENST00000493453 FAM50AQ14320 339 aaKnown RBP13.08□□□□□ -0.32
AKAP9-214ENST00000493453 HMGXB3Q12766 1538 aa13.06□□□□□ -0.32
AKAP9-214ENST00000493453 CLSPNQ9HAW4 1339 aa13.06□□□□□ -0.32
AKAP9-214ENST00000493453 ACIN1Q9UKV3 1341 aaKnown RBP13.06□□□□□ -0.32
AKAP9-214ENST00000493453 NCAPD3P42695 1498 aa13.04□□□□□ -0.32
AKAP9-214ENST00000493453 NEFLP07196 543 aa13.02□□□□□ -0.33
AKAP9-214ENST00000493453 ERICH3Q5RHP9 1530 aa13.01□□□□□ -0.33
AKAP9-214ENST00000493453 TOP2BQ02880 1626 aa13.01□□□□□ -0.33
AKAP9-214ENST00000493453 SYNJ1O43426 1573 aa13□□□□□ -0.33
AKAP9-214ENST00000493453 FHAD1B1AJZ9 1412 aa13□□□□□ -0.33
AKAP9-214ENST00000493453 RUSC2Q8N2Y8 1516 aa12.98□□□□□ -0.33
AKAP9-214ENST00000493453 CUX2O14529 1486 aa12.98□□□□□ -0.33
AKAP9-214ENST00000493453 RAPGEF2Q9Y4G8 1499 aa12.97□□□□□ -0.33
AKAP9-214ENST00000493453 CADPSQ9ULU8 1353 aa12.94□□□□□ -0.34
AKAP9-214ENST00000493453 CARMIL1Q5VZK9 1371 aa12.94□□□□□ -0.34
AKAP9-214ENST00000493453 GTF3C3Q9Y5Q9 886 aa12.92□□□□□ -0.34
AKAP9-214ENST00000493453 CCNB3Q8WWL7 1395 aa12.89□□□□□ -0.35
AKAP9-214ENST00000493453 BIVM-ERCC5R4GMW8 1640 aa12.89□□□□□ -0.35
AKAP9-214ENST00000493453 CFTRP13569 1480 aa12.89□□□□□ -0.35
AKAP9-214ENST00000493453 P3H3Q8IVL6 736 aa12.89□□□□□ -0.35
AKAP9-214ENST00000493453 NEUROD1Q13562 356 aa12.87□□□□□ -0.35
AKAP9-214ENST00000493453 MTUS2Q5JR59 1369 aa12.85□□□□□ -0.35
AKAP9-214ENST00000493453 CDK11AQ9UQ88 783 aaPredicted RBP12.84□□□□□ -0.35
AKAP9-214ENST00000493453 ANP32CO43423 234 aa12.84□□□□□ -0.35
AKAP9-214ENST00000493453 TRIM52Q96A61 297 aa12.83□□□□□ -0.36
AKAP9-214ENST00000493453 PDS5BQ9NTI5 1447 aa12.82□□□□□ -0.36
AKAP9-214ENST00000493453 ARHGAP35Q9NRY4 1499 aa12.82□□□□□ -0.36
AKAP9-214ENST00000493453 TONSLQ96HA7 1378 aa12.81□□□□□ -0.36
AKAP9-214ENST00000493453 FANCD2Q9BXW9 1451 aa12.81□□□□□ -0.36
AKAP9-214ENST00000493453 PRXQ9BXM0 1461 aa12.81□□□□□ -0.36
AKAP9-214ENST00000493453 FMN1Q68DA7 1419 aa12.8□□□□□ -0.36
AKAP9-214ENST00000493453 CUX1P39880 1505 aa12.8□□□□□ -0.36
AKAP9-214ENST00000493453 SCAF1Q9H7N4 1312 aaKnown RBP12.79□□□□□ -0.36
AKAP9-214ENST00000493453 TIMELESSQ9UNS1 1208 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms