RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 NISCHQ9Y2I1 1504 aa11.9□□□□□ -0.5
CCDC6-202ENST00000491922 AEBP2Q6ZN18 517 aaPredicted RBP11.75□□□□□ -0.53
CCDC6-202ENST00000491922 CHIC1Q5VXU3 224 aa11.36□□□□□ -0.59
CCDC6-202ENST00000491922 HRCP23327 699 aa10.93□□□□□ -0.66
CCDC6-202ENST00000491922 PELP1Q8IZL8 1130 aaKnown RBP10.84□□□□□ -0.67
CCDC6-202ENST00000491922 PPARGC1BQ86YN6 1023 aaKnown RBP10.56□□□□□ -0.72
CCDC6-202ENST00000491922 PCGF6Q9BYE7 350 aa10.56□□□□□ -0.72
CCDC6-202ENST00000491922 MYO15BQ96JP2 1530 aa10.51□□□□□ -0.73
CCDC6-202ENST00000491922 MYT1Q01538 1121 aa10.5□□□□□ -0.73
CCDC6-202ENST00000491922 SUPT5HO00267 1087 aaKnown RBP10.46□□□□□ -0.74
CCDC6-202ENST00000491922 DCAF1Q9Y4B6 1507 aa10.45□□□□□ -0.74
CCDC6-202ENST00000491922 SHROOM4Q9ULL8 1493 aa10.44□□□□□ -0.74
CCDC6-202ENST00000491922 CCDC180Q9P1Z9 1646 aa10.37□□□□□ -0.75
CCDC6-202ENST00000491922 SCAF1Q9H7N4 1312 aaKnown RBP10.35□□□□□ -0.75
CCDC6-202ENST00000491922 ZEB1P37275 1124 aaPredicted RBP10.32□□□□□ -0.76
CCDC6-202ENST00000491922 TRIM26Q12899 539 aaPredicted RBP10.29□□□□□ -0.76
CCDC6-202ENST00000491922 SENP3Q9H4L4 574 aaPredicted RBP10.2□□□□□ -0.78
CCDC6-202ENST00000491922 ZCCHC6Q5VYS8 1495 aaKnown RBP10.16□□□□□ -0.78
CCDC6-202ENST00000491922 ABCC9O60706 1549 aa10.12□□□□□ -0.79
CCDC6-202ENST00000491922 ACIN1Q9UKV3 1341 aaKnown RBP10.11□□□□□ -0.79
CCDC6-202ENST00000491922 LOC105371045A0A1W2PR82 267 aa10.1□□□□□ -0.79
CCDC6-202ENST00000491922 TTBK1Q5TCY1 1321 aaPredicted RBP10.03□□□□□ -0.8
CCDC6-202ENST00000491922 NEUROD1Q13562 356 aa10.02□□□□□ -0.81
CCDC6-202ENST00000491922 CENPBP07199 599 aaPredicted RBP10.01□□□□□ -0.81
CCDC6-202ENST00000491922 GTF3C3Q9Y5Q9 886 aa9.99□□□□□ -0.81
CCDC6-202ENST00000491922 PHF23Q9BUL5 403 aaPredicted RBP9.98□□□□□ -0.81
CCDC6-202ENST00000491922 DNAJC5BQ9UF47 199 aa9.98□□□□□ -0.81
CCDC6-202ENST00000491922 DIEXFQ68CQ4 756 aaKnown RBP9.86□□□□□ -0.83
CCDC6-202ENST00000491922 CCER1Q8TC90 406 aaPredicted RBP9.78□□□□□ -0.84
CCDC6-202ENST00000491922 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.74□□□□□ -0.85
CCDC6-202ENST00000491922 PRKCSHP14314 528 aaPredicted RBP9.73□□□□□ -0.85
CCDC6-202ENST00000491922 TRIM41Q8WV44 630 aa9.73□□□□□ -0.85
CCDC6-202ENST00000491922 DCAF8L2P0C7V8 631 aa9.68□□□□□ -0.86
CCDC6-202ENST00000491922 DNAJC5Q9H3Z4 198 aa9.68□□□□□ -0.86
CCDC6-202ENST00000491922 ZNF316A6NFI3 1004 aaPredicted RBP9.67□□□□□ -0.86
CCDC6-202ENST00000491922 CLSPNQ9HAW4 1339 aa9.65□□□□□ -0.86
CCDC6-202ENST00000491922 FAM9AQ8IZU1 332 aaPredicted RBP9.64□□□□□ -0.87
CCDC6-202ENST00000491922 BCL11AQ9H165 835 aa9.64□□□□□ -0.87
CCDC6-202ENST00000491922 YTHDC1Q96MU7 727 aaKnown RBP9.63□□□□□ -0.87
CCDC6-202ENST00000491922 ANP32EQ9BTT0 268 aa9.62□□□□□ -0.87
CCDC6-202ENST00000491922 RB1CC1Q8TDY2 1594 aa9.6□□□□□ -0.87
CCDC6-202ENST00000491922 RSF1Q96T23 1441 aaPredicted RBP9.58□□□□□ -0.88
CCDC6-202ENST00000491922 MIER1Q8N108 512 aa9.56□□□□□ -0.88
CCDC6-202ENST00000491922 WRNQ14191 1432 aaPredicted RBP eCLIP9.55□□□□□ -0.88
CCDC6-202ENST00000491922 ERICH6Q7L0X2 663 aa9.54□□□□□ -0.88
CCDC6-202ENST00000491922 EHMT2Q96KQ7 1210 aa9.52□□□□□ -0.88
CCDC6-202ENST00000491922 APLP2Q06481 763 aa9.52□□□□□ -0.89
CCDC6-202ENST00000491922 SUPT16HQ9Y5B9 1047 aaKnown RBP9.51□□□□□ -0.89
CCDC6-202ENST00000491922 TSHZ2Q9NRE2 1034 aa9.49□□□□□ -0.89
CCDC6-202ENST00000491922 CSRNP3Q8WYN3 585 aa9.45□□□□□ -0.9
CCDC6-202ENST00000491922 CEP162Q5TB80 1403 aa9.4□□□□□ -0.9
CCDC6-202ENST00000491922 FOXD1Q16676 465 aa9.37□□□□□ -0.91
CCDC6-202ENST00000491922 SCRIBQ14160 1630 aa9.36□□□□□ -0.91
CCDC6-202ENST00000491922 EIF4G1Q04637 1599 aaKnown RBP9.36□□□□□ -0.91
CCDC6-202ENST00000491922 TNIKQ9UKE5 1360 aa9.36□□□□□ -0.91
CCDC6-202ENST00000491922 SLC24A1O60721 1099 aa9.34□□□□□ -0.91
CCDC6-202ENST00000491922 NACADO15069 1562 aa9.32□□□□□ -0.92
CCDC6-202ENST00000491922 EEA1Q15075 1411 aa9.29□□□□□ -0.92
CCDC6-202ENST00000491922 PABPN1Q86U42 306 aaKnown RBP eCLIP9.28□□□□□ -0.92
CCDC6-202ENST00000491922 BAZ1AQ9NRL2 1556 aaPredicted RBP9.27□□□□□ -0.93
CCDC6-202ENST00000491922 MROH2BQ7Z745 1585 aa9.26□□□□□ -0.93
CCDC6-202ENST00000491922 WIZO95785 1651 aa9.26□□□□□ -0.93
CCDC6-202ENST00000491922 HNRNPUL2Q1KMD3 747 aaKnown RBP9.26□□□□□ -0.93
CCDC6-202ENST00000491922 RBM19Q9Y4C8 960 aaKnown RBP9.26□□□□□ -0.93
CCDC6-202ENST00000491922 CCDC88BA6NC98 1476 aa9.24□□□□□ -0.93
CCDC6-202ENST00000491922 GOLGA3Q08378 1498 aa9.24□□□□□ -0.93
CCDC6-202ENST00000491922 CECR2Q9BXF3 1484 aa9.23□□□□□ -0.93
CCDC6-202ENST00000491922 ABCC8Q09428 1581 aa9.23□□□□□ -0.93
CCDC6-202ENST00000491922 MYT1LQ9UL68 1186 aa9.22□□□□□ -0.93
CCDC6-202ENST00000491922 BICRAQ9NZM4 1560 aa9.21□□□□□ -0.93
CCDC6-202ENST00000491922 FKBP8Q14318 412 aa9.21□□□□□ -0.94
CCDC6-202ENST00000491922 UNC13AQ9UPW8 1703 aa9.21□□□□□ -0.94
CCDC6-202ENST00000491922 BCANQ96GW7 911 aa9.2□□□□□ -0.94
CCDC6-202ENST00000491922 SOGA1O94964 1423 aa9.2□□□□□ -0.94
CCDC6-202ENST00000491922 UBTFP17480 764 aaKnown RBP9.19□□□□□ -0.94
CCDC6-202ENST00000491922 NEFLP07196 543 aa9.19□□□□□ -0.94
CCDC6-202ENST00000491922 DHX57Q6P158 1386 aaKnown RBP9.18□□□□□ -0.94
CCDC6-202ENST00000491922 FANCIQ9NVI1 1328 aa9.17□□□□□ -0.94
CCDC6-202ENST00000491922 CC2D2AQ9P2K1 1620 aa9.17□□□□□ -0.94
CCDC6-202ENST00000491922 VPS8Q8N3P4 1428 aa9.16□□□□□ -0.94
CCDC6-202ENST00000491922 MSH5O43196 834 aa9.16□□□□□ -0.94
CCDC6-202ENST00000491922 KIF21BO75037 1637 aa9.15□□□□□ -0.95
CCDC6-202ENST00000491922 PLPPR3Q6T4P5 718 aa9.14□□□□□ -0.95
CCDC6-202ENST00000491922 CEP164Q9UPV0 1460 aa9.13□□□□□ -0.95
CCDC6-202ENST00000491922 CLIP1P30622 1438 aa9.13□□□□□ -0.95
CCDC6-202ENST00000491922 TOP2AP11388 1531 aaKnown RBP9.13□□□□□ -0.95
CCDC6-202ENST00000491922 RUSC2Q8N2Y8 1516 aa9.12□□□□□ -0.95
CCDC6-202ENST00000491922 KCNH8Q96L42 1107 aa9.11□□□□□ -0.95
CCDC6-202ENST00000491922 CUX2O14529 1486 aa9.11□□□□□ -0.95
CCDC6-202ENST00000491922 BAZ1BQ9UIG0 1483 aaKnown RBP9.09□□□□□ -0.95
CCDC6-202ENST00000491922 SMARCA2P51531 1590 aa9.09□□□□□ -0.95
CCDC6-202ENST00000491922 DEKP35659 375 aaKnown RBP9.07□□□□□ -0.96
CCDC6-202ENST00000491922 ITGAEP38570 1179 aa9.07□□□□□ -0.96
CCDC6-202ENST00000491922 CDK11AQ9UQ88 783 aaPredicted RBP9.06□□□□□ -0.96
CCDC6-202ENST00000491922 CCER2I3L3R5 266 aa9.05□□□□□ -0.96
CCDC6-202ENST00000491922 ERICH6BQ5W0A0 696 aa9.04□□□□□ -0.96
CCDC6-202ENST00000491922 DAXXQ9UER7 740 aaPredicted RBP9.03□□□□□ -0.96
CCDC6-202ENST00000491922 RRBP1Q9P2E9 1410 aaKnown RBP9.02□□□□□ -0.97
CCDC6-202ENST00000491922 PPP1R15AO75807 674 aaPredicted RBP8.99□□□□□ -0.97
CCDC6-202ENST00000491922 DDX10Q13206 875 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms