RNA–Protein interactions for RNA: ENST00000491136.6

CC2D1B-209, Transcript of coiled-coil and C2 domain containing 1B, humanhuman

TSL 1 (best)

Gene CC2D1B, Length 4,335 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CC2D1B-209ENST00000491136 NISCHQ9Y2I1 1504 aa20.58■□□□□ 0.88
CC2D1B-209ENST00000491136 DCAF8L2P0C7V8 631 aa19.81■□□□□ 0.76
CC2D1B-209ENST00000491136 SHROOM4Q9ULL8 1493 aa18.86■□□□□ 0.61
CC2D1B-209ENST00000491136 SUPT5HO00267 1087 aaKnown RBP18.71■□□□□ 0.59
CC2D1B-209ENST00000491136 EHMT2Q96KQ7 1210 aa17.84■□□□□ 0.45
CC2D1B-209ENST00000491136 ABCC9O60706 1549 aa17.67■□□□□ 0.42
CC2D1B-209ENST00000491136 FAM9AQ8IZU1 332 aaPredicted RBP17.56■□□□□ 0.4
CC2D1B-209ENST00000491136 PABPN1Q86U42 306 aaKnown RBP eCLIP17.32■□□□□ 0.36
CC2D1B-209ENST00000491136 TRIM41Q8WV44 630 aa17.29■□□□□ 0.36
CC2D1B-209ENST00000491136 RANGAP1P46060 587 aaPredicted RBP17.12■□□□□ 0.33
CC2D1B-209ENST00000491136 TTBK1Q5TCY1 1321 aaPredicted RBP17.1■□□□□ 0.33
CC2D1B-209ENST00000491136 ZCCHC6Q5VYS8 1495 aaKnown RBP17.08■□□□□ 0.33
CC2D1B-209ENST00000491136 CCDC180Q9P1Z9 1646 aa17.07■□□□□ 0.32
CC2D1B-209ENST00000491136 CHIC1Q5VXU3 224 aa17■□□□□ 0.31
CC2D1B-209ENST00000491136 PCGF6Q9BYE7 350 aa16.91■□□□□ 0.3
CC2D1B-209ENST00000491136 UBTFP17480 764 aaKnown RBP16.91■□□□□ 0.3
CC2D1B-209ENST00000491136 APLP2Q06481 763 aa16.9■□□□□ 0.3
CC2D1B-209ENST00000491136 SCRIBQ14160 1630 aa16.89■□□□□ 0.29
CC2D1B-209ENST00000491136 LOC105371045A0A1W2PR82 267 aa16.88■□□□□ 0.29
CC2D1B-209ENST00000491136 PPARGC1BQ86YN6 1023 aaKnown RBP16.78■□□□□ 0.28
CC2D1B-209ENST00000491136 ATP1B4Q9UN42 357 aaPredicted RBP16.74■□□□□ 0.27
CC2D1B-209ENST00000491136 RB1CC1Q8TDY2 1594 aa16.5■□□□□ 0.23
CC2D1B-209ENST00000491136 NACADO15069 1562 aa16.44■□□□□ 0.22
CC2D1B-209ENST00000491136 CCER1Q8TC90 406 aaPredicted RBP16.38■□□□□ 0.21
CC2D1B-209ENST00000491136 RSF1Q96T23 1441 aaPredicted RBP16.35■□□□□ 0.21
CC2D1B-209ENST00000491136 DCAF1Q9Y4B6 1507 aa16.33■□□□□ 0.2
CC2D1B-209ENST00000491136 CECR2Q9BXF3 1484 aa16.29■□□□□ 0.2
CC2D1B-209ENST00000491136 TRIM26Q12899 539 aaPredicted RBP16.29■□□□□ 0.2
CC2D1B-209ENST00000491136 ITGAEP38570 1179 aa16.28■□□□□ 0.2
CC2D1B-209ENST00000491136 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.24■□□□□ 0.19
CC2D1B-209ENST00000491136 HNRNPUL2Q1KMD3 747 aaKnown RBP16.24■□□□□ 0.19
CC2D1B-209ENST00000491136 CSRNP3Q8WYN3 585 aa16.18■□□□□ 0.18
CC2D1B-209ENST00000491136 FBLN2P98095 1184 aa16.13■□□□□ 0.17
CC2D1B-209ENST00000491136 P3H3Q8IVL6 736 aa16.08■□□□□ 0.16
CC2D1B-209ENST00000491136 ZEB1P37275 1124 aaPredicted RBP16.07■□□□□ 0.16
CC2D1B-209ENST00000491136 MROH2BQ7Z745 1585 aa16.03■□□□□ 0.16
CC2D1B-209ENST00000491136 BAZ1AQ9NRL2 1556 aaPredicted RBP16.01■□□□□ 0.15
CC2D1B-209ENST00000491136 BAZ1BQ9UIG0 1483 aaKnown RBP16.01■□□□□ 0.15
CC2D1B-209ENST00000491136 MYO15BQ96JP2 1530 aa15.99■□□□□ 0.15
CC2D1B-209ENST00000491136 ARID3CA6NKF2 412 aa15.97■□□□□ 0.15
CC2D1B-209ENST00000491136 HRCP23327 699 aa15.97■□□□□ 0.15
CC2D1B-209ENST00000491136 FAM50AQ14320 339 aaKnown RBP15.92■□□□□ 0.14
CC2D1B-209ENST00000491136 MYT1LQ9UL68 1186 aa15.9■□□□□ 0.14
CC2D1B-209ENST00000491136 WRNQ14191 1432 aaPredicted RBP eCLIP15.83■□□□□ 0.12
CC2D1B-209ENST00000491136 WIZO95785 1651 aa15.81■□□□□ 0.12
CC2D1B-209ENST00000491136 CCDC88BA6NC98 1476 aa15.79■□□□□ 0.12
CC2D1B-209ENST00000491136 YTHDC1Q96MU7 727 aaKnown RBP15.7■□□□□ 0.1
CC2D1B-209ENST00000491136 ABCC8Q09428 1581 aa15.68■□□□□ 0.1
CC2D1B-209ENST00000491136 SOGA1O94964 1423 aa15.66■□□□□ 0.1
CC2D1B-209ENST00000491136 TRIM52Q96A61 297 aa15.66■□□□□ 0.1
CC2D1B-209ENST00000491136 PELP1Q8IZL8 1130 aaKnown RBP15.64■□□□□ 0.09
CC2D1B-209ENST00000491136 NEUROD1Q13562 356 aa15.64■□□□□ 0.09
CC2D1B-209ENST00000491136 ATAD2BQ9ULI0 1458 aa15.64■□□□□ 0.09
CC2D1B-209ENST00000491136 POLR3GLQ9BT43 218 aa15.63■□□□□ 0.09
CC2D1B-209ENST00000491136 SMARCA2P51531 1590 aa15.63■□□□□ 0.09
CC2D1B-209ENST00000491136 CHMP7Q8WUX9 453 aaPredicted RBP15.62■□□□□ 0.09
CC2D1B-209ENST00000491136 CLIP1P30622 1438 aa15.62■□□□□ 0.09
CC2D1B-209ENST00000491136 SMARCA4P51532 1647 aa15.61■□□□□ 0.09
CC2D1B-209ENST00000491136 ZNF777Q9ULD5 760 aaPredicted RBP15.61■□□□□ 0.09
CC2D1B-209ENST00000491136 CNGB1Q14028 1251 aaPredicted RBP15.6■□□□□ 0.09
CC2D1B-209ENST00000491136 TOP2AP11388 1531 aaKnown RBP15.59■□□□□ 0.09
CC2D1B-209ENST00000491136 CEP162Q5TB80 1403 aa15.57■□□□□ 0.08
CC2D1B-209ENST00000491136 KIF27Q86VH2 1401 aa15.57■□□□□ 0.08
CC2D1B-209ENST00000491136 EEA1Q15075 1411 aa15.56■□□□□ 0.08
CC2D1B-209ENST00000491136 GOLGA3Q08378 1498 aa15.55■□□□□ 0.08
CC2D1B-209ENST00000491136 CENPBP07199 599 aaPredicted RBP15.54■□□□□ 0.08
CC2D1B-209ENST00000491136 ERCC6Q03468 1493 aa15.53■□□□□ 0.08
CC2D1B-209ENST00000491136 CUX2O14529 1486 aa15.5■□□□□ 0.07
CC2D1B-209ENST00000491136 CDK11AQ9UQ88 783 aaPredicted RBP15.48■□□□□ 0.07
CC2D1B-209ENST00000491136 TNIKQ9UKE5 1360 aa15.47■□□□□ 0.07
CC2D1B-209ENST00000491136 CADPSQ9ULU8 1353 aa15.46■□□□□ 0.07
CC2D1B-209ENST00000491136 CEP164Q9UPV0 1460 aa15.46■□□□□ 0.07
CC2D1B-209ENST00000491136 CHIC2Q9UKJ5 165 aa15.45■□□□□ 0.06
CC2D1B-209ENST00000491136 TDRD9Q8NDG6 1382 aaKnown RBP15.44■□□□□ 0.06
CC2D1B-209ENST00000491136 ZNF326Q5BKZ1 582 aaKnown RBP15.44■□□□□ 0.06
CC2D1B-209ENST00000491136 CARMIL1Q5VZK9 1371 aa15.42■□□□□ 0.06
CC2D1B-209ENST00000491136 DIEXFQ68CQ4 756 aaKnown RBP15.42■□□□□ 0.06
CC2D1B-209ENST00000491136 MTUS2Q5JR59 1369 aa15.41■□□□□ 0.06
CC2D1B-209ENST00000491136 RUSC2Q8N2Y8 1516 aa15.37■□□□□ 0.05
CC2D1B-209ENST00000491136 PDS5BQ9NTI5 1447 aa15.37■□□□□ 0.05
CC2D1B-209ENST00000491136 EIF4G1Q04637 1599 aaKnown RBP15.36■□□□□ 0.05
CC2D1B-209ENST00000491136 KCNH8Q96L42 1107 aa15.32■□□□□ 0.04
CC2D1B-209ENST00000491136 NPM1P06748 294 aaKnown RBP eCLIP15.31■□□□□ 0.04
CC2D1B-209ENST00000491136 NCAPD3P42695 1498 aa15.29■□□□□ 0.04
CC2D1B-209ENST00000491136 BICRAQ9NZM4 1560 aa15.27■□□□□ 0.03
CC2D1B-209ENST00000491136 DNAJC5BQ9UF47 199 aa15.27■□□□□ 0.03
CC2D1B-209ENST00000491136 RRP7BPQ9NSQ0 103 aa15.26■□□□□ 0.03
CC2D1B-209ENST00000491136 FANCD2Q9BXW9 1451 aa15.26■□□□□ 0.03
CC2D1B-209ENST00000491136 SLC4A1APQ9BWU0 796 aaKnown RBP15.25■□□□□ 0.03
CC2D1B-209ENST00000491136 ZNF316A6NFI3 1004 aaPredicted RBP15.24■□□□□ 0.03
CC2D1B-209ENST00000491136 PLEKHD1A6NEE1 506 aa15.22■□□□□ 0.03
CC2D1B-209ENST00000491136 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.22■□□□□ 0.036e-6■□□□□ 11
CC2D1B-209ENST00000491136 RAPGEF2Q9Y4G8 1499 aa15.22■□□□□ 0.03
CC2D1B-209ENST00000491136 KANK4Q5T7N3 995 aaPredicted RBP15.22■□□□□ 0.03
CC2D1B-209ENST00000491136 MYT1Q01538 1121 aa15.2■□□□□ 0.02
CC2D1B-209ENST00000491136 TSPY4P0CV99 314 aa15.19■□□□□ 0.02
CC2D1B-209ENST00000491136 TSPY10P0CW01 314 aa15.19■□□□□ 0.02
CC2D1B-209ENST00000491136 NEFLP07196 543 aa15.17■□□□□ 0.02
CC2D1B-209ENST00000491136 ERICH6Q7L0X2 663 aa15.16■□□□□ 0.02
CC2D1B-209ENST00000491136 NESP48681 1621 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 283.5 ms