RNA–Protein interactions for RNA: ENST00000490323.5

CBWD2-209, Transcript of COBW domain containing 2, humanhuman

TSL 1 (best)

Gene CBWD2, Length 880 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD2-209ENST00000490323 AEBP2Q6ZN18 517 aaPredicted RBP31.31■■■□□ 2.6
CBWD2-209ENST00000490323 CHIC1Q5VXU3 224 aa29.78■■■□□ 2.36
CBWD2-209ENST00000490323 SENP3Q9H4L4 574 aaPredicted RBP26.72■■□□□ 1.87
CBWD2-209ENST00000490323 PHF23Q9BUL5 403 aaPredicted RBP26.38■■□□□ 1.81
CBWD2-209ENST00000490323 FOXD1Q16676 465 aa24.89■■□□□ 1.58
CBWD2-209ENST00000490323 PLPPR3Q6T4P5 718 aa23.82■■□□□ 1.4
CBWD2-209ENST00000490323 PPP6R1Q9UPN7 881 aa23.3■■□□□ 1.32
CBWD2-209ENST00000490323 MSH5O43196 834 aa23.29■■□□□ 1.32
CBWD2-209ENST00000490323 PIAS4Q8N2W9 510 aaPredicted RBP23.28■■□□□ 1.32
CBWD2-209ENST00000490323 POTEDQ86YR6 584 aa23.24■■□□□ 1.31
CBWD2-209ENST00000490323 ADRA2BP18089 450 aa23.23■■□□□ 1.31
CBWD2-209ENST00000490323 MAPK8IP2Q13387 824 aaPredicted RBP21.32■■□□□ 1
CBWD2-209ENST00000490323 SCAF1Q9H7N4 1312 aaKnown RBP21.28■■□□□ 1
CBWD2-209ENST00000490323 DMRT2Q9Y5R5 561 aa21.19■□□□□ 0.98
CBWD2-209ENST00000490323 NISCHQ9Y2I1 1504 aa21.09■□□□□ 0.97
CBWD2-209ENST00000490323 PPP4R3CPQ6ZMV5 832 aa20.88■□□□□ 0.93
CBWD2-209ENST00000490323 CNKSR2Q8WXI2 1034 aa20.48■□□□□ 0.87
CBWD2-209ENST00000490323 HOXD11P31277 338 aaPredicted RBP20.42■□□□□ 0.86
CBWD2-209ENST00000490323 DCAF8L1A6NGE4 600 aa20.34■□□□□ 0.85
CBWD2-209ENST00000490323 RNF216Q9NWF9 866 aaPredicted RBP20.28■□□□□ 0.84
CBWD2-209ENST00000490323 NCBP3Q53F19 620 aaKnown RBP20.1■□□□□ 0.81
CBWD2-209ENST00000490323 CACNB1Q02641 598 aaPredicted RBP19.97■□□□□ 0.79
CBWD2-209ENST00000490323 RNF39Q9H2S5 420 aa19.87■□□□□ 0.77
CBWD2-209ENST00000490323 NPM3O75607 178 aaKnown RBP19.8■□□□□ 0.76
CBWD2-209ENST00000490323 DNAJC5BQ9UF47 199 aa19.7■□□□□ 0.74
CBWD2-209ENST00000490323 C1QBPQ07021 282 aaKnown RBP19.58■□□□□ 0.72
CBWD2-209ENST00000490323 ABCC9O60706 1549 aa19.51■□□□□ 0.71
CBWD2-209ENST00000490323 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.47■□□□□ 0.71
CBWD2-209ENST00000490323 KCNA4P22459 653 aa19.45■□□□□ 0.7
CBWD2-209ENST00000490323 CCDC180Q9P1Z9 1646 aa19.29■□□□□ 0.68
CBWD2-209ENST00000490323 U3KPZ7 1027 aaPredicted RBP19.06■□□□□ 0.64
CBWD2-209ENST00000490323 SLC4A2P04920 1241 aa18.89■□□□□ 0.61
CBWD2-209ENST00000490323 SPINK5Q9NQ38 1064 aaPredicted RBP18.77■□□□□ 0.6
CBWD2-209ENST00000490323 CAPN15O75808 1086 aa18.75■□□□□ 0.59
CBWD2-209ENST00000490323 DSG3P32926 999 aa18.62■□□□□ 0.57
CBWD2-209ENST00000490323 APLP2Q06481 763 aa18.56■□□□□ 0.56
CBWD2-209ENST00000490323 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.54■□□□□ 0.56
CBWD2-209ENST00000490323 HNRNPUL2Q1KMD3 747 aaKnown RBP18.54■□□□□ 0.56
CBWD2-209ENST00000490323 TRHP20396 242 aaPredicted RBP18.46■□□□□ 0.55
CBWD2-209ENST00000490323 RB1CC1Q8TDY2 1594 aa18.46■□□□□ 0.55
CBWD2-209ENST00000490323 SAMD1Q6SPF0 538 aaPredicted RBP18.44■□□□□ 0.54
CBWD2-209ENST00000490323 ZNF219Q9P2Y4 722 aaPredicted RBP18.43■□□□□ 0.54
CBWD2-209ENST00000490323 SLC4A1APQ9BWU0 796 aaKnown RBP18.38■□□□□ 0.53
CBWD2-209ENST00000490323 ABCB7O75027 752 aa18.32■□□□□ 0.52
CBWD2-209ENST00000490323 MYCNP04198 464 aaPredicted RBP18.32■□□□□ 0.52
CBWD2-209ENST00000490323 NACADO15069 1562 aa18.22■□□□□ 0.51
CBWD2-209ENST00000490323 FOXD4L1Q9NU39 408 aa18.15■□□□□ 0.5
CBWD2-209ENST00000490323 UNC13AQ9UPW8 1703 aa18.14■□□□□ 0.49
CBWD2-209ENST00000490323 BICRAQ9NZM4 1560 aa18■□□□□ 0.47
CBWD2-209ENST00000490323 POLA2Q14181 598 aa17.97■□□□□ 0.47
CBWD2-209ENST00000490323 PABPN1Q86U42 306 aaKnown RBP eCLIP17.93■□□□□ 0.46
CBWD2-209ENST00000490323 MYO15BQ96JP2 1530 aa17.88■□□□□ 0.45
CBWD2-209ENST00000490323 POTEHQ6S545 545 aa17.88■□□□□ 0.45
CBWD2-209ENST00000490323 ATF5Q9Y2D1 282 aaPredicted RBP17.88■□□□□ 0.45
CBWD2-209ENST00000490323 ZBTB22O15209 634 aa17.87■□□□□ 0.45
CBWD2-209ENST00000490323 RBM42Q9BTD8 480 aaKnown RBP17.78■□□□□ 0.44
CBWD2-209ENST00000490323 SHROOM4Q9ULL8 1493 aa17.76■□□□□ 0.43
CBWD2-209ENST00000490323 CC2D2AQ9P2K1 1620 aa17.69■□□□□ 0.42
CBWD2-209ENST00000490323 CECR2Q9BXF3 1484 aa17.64■□□□□ 0.41
CBWD2-209ENST00000490323 EHMT2Q96KQ7 1210 aa17.63■□□□□ 0.41
CBWD2-209ENST00000490323 ZBTB12Q9Y330 459 aaPredicted RBP17.62■□□□□ 0.41
CBWD2-209ENST00000490323 DCAF8L2P0C7V8 631 aa17.6■□□□□ 0.41
CBWD2-209ENST00000490323 ATXN8OSP0DMR3 200 aa17.59■□□□□ 0.41
CBWD2-209ENST00000490323 EIF4G1Q04637 1599 aaKnown RBP17.56■□□□□ 0.4
CBWD2-209ENST00000490323 DCAF1Q9Y4B6 1507 aa17.47■□□□□ 0.39
CBWD2-209ENST00000490323 ZCCHC6Q5VYS8 1495 aaKnown RBP17.46■□□□□ 0.39
CBWD2-209ENST00000490323 DNAJC5Q9H3Z4 198 aa17.42■□□□□ 0.38
CBWD2-209ENST00000490323 SCRIBQ14160 1630 aa17.42■□□□□ 0.38
CBWD2-209ENST00000490323 CSRNP3Q8WYN3 585 aa17.4■□□□□ 0.38
CBWD2-209ENST00000490323 OSCARQ8IYS5 282 aa17.39■□□□□ 0.37
CBWD2-209ENST00000490323 AKT1S1Q96B36 256 aa17.38■□□□□ 0.37
CBWD2-209ENST00000490323 CHRDL2Q6WN34 429 aa17.37■□□□□ 0.37
CBWD2-209ENST00000490323 FBLN2P98095 1184 aa17.21■□□□□ 0.35
CBWD2-209ENST00000490323 REM2Q8IYK8 340 aaPredicted RBP17.21■□□□□ 0.35
CBWD2-209ENST00000490323 CUX2O14529 1486 aa17.1■□□□□ 0.33
CBWD2-209ENST00000490323 SPDYE2BA6NHP3 402 aa17.07■□□□□ 0.32
CBWD2-209ENST00000490323 SPDYE6P0CI01 402 aa17.07■□□□□ 0.32
CBWD2-209ENST00000490323 SPDYE2Q495Y8 402 aa17.07■□□□□ 0.32
CBWD2-209ENST00000490323 MKRN4PQ13434 485 aaPredicted RBP17.06■□□□□ 0.32
CBWD2-209ENST00000490323 PITPNM1O00562 1244 aa17.03■□□□□ 0.32
CBWD2-209ENST00000490323 PIP4P2Q8N4L2 257 aa16.96■□□□□ 0.31
CBWD2-209ENST00000490323 ZNF692Q9BU19 519 aaPredicted RBP16.88■□□□□ 0.29
CBWD2-209ENST00000490323 ERCC6Q03468 1493 aa16.86■□□□□ 0.29
CBWD2-209ENST00000490323 FXR2P51116 673 aaKnown RBP eCLIP16.86■□□□□ 0.29
CBWD2-209ENST00000490323 SSUH2Q9Y2M2 353 aa16.84■□□□□ 0.29
CBWD2-209ENST00000490323 NCAPD3P42695 1498 aa16.78■□□□□ 0.28
CBWD2-209ENST00000490323 SPDYE1Q8NFV5 336 aaPredicted RBP16.76■□□□□ 0.27
CBWD2-209ENST00000490323 THOC2Q8NI27 1593 aaKnown RBP16.74■□□□□ 0.27
CBWD2-209ENST00000490323 CLEC11AQ9Y240 323 aa16.74■□□□□ 0.27
CBWD2-209ENST00000490323 HMGXB3Q12766 1538 aa16.73■□□□□ 0.27
CBWD2-209ENST00000490323 SP7Q8TDD2 431 aaPredicted RBP16.68■□□□□ 0.26
CBWD2-209ENST00000490323 ATAD2BQ9ULI0 1458 aa16.67■□□□□ 0.26
CBWD2-209ENST00000490323 HAX1O00165 279 aa16.66■□□□□ 0.26
CBWD2-209ENST00000490323 NESP48681 1621 aa16.66■□□□□ 0.26
CBWD2-209ENST00000490323 SMARCA2P51531 1590 aa16.64■□□□□ 0.25
CBWD2-209ENST00000490323 SMARCA4P51532 1647 aa16.62■□□□□ 0.25
CBWD2-209ENST00000490323 PRKAR2AP13861 404 aaKnown RBP16.59■□□□□ 0.25
CBWD2-209ENST00000490323 LAMC3Q9Y6N6 1575 aa16.55■□□□□ 0.24
CBWD2-209ENST00000490323 KIF21AQ7Z4S6 1674 aa16.53■□□□□ 0.24
CBWD2-209ENST00000490323 PEG3Q9GZU2 1588 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms