RNA–Protein interactions for RNA: ENST00000490123.5

ZNF542P-206, Transcript of zinc finger protein 542, pseudogene, humanhuman

TSL 1 (best)

Gene ZNF542P, Length 3,440 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF542P-206ENST00000490123 NISCHQ9Y2I1 1504 aa20.21■□□□□ 0.83
ZNF542P-206ENST00000490123 SUPT5HO00267 1087 aaKnown RBP18.25■□□□□ 0.51
ZNF542P-206ENST00000490123 SHROOM4Q9ULL8 1493 aa18.21■□□□□ 0.51
ZNF542P-206ENST00000490123 PCGF6Q9BYE7 350 aa17.82■□□□□ 0.44
ZNF542P-206ENST00000490123 DCAF8L2P0C7V8 631 aa17.79■□□□□ 0.44
ZNF542P-206ENST00000490123 HRCP23327 699 aa17.73■□□□□ 0.43
ZNF542P-206ENST00000490123 PPARGC1BQ86YN6 1023 aaKnown RBP17.56■□□□□ 0.4
ZNF542P-206ENST00000490123 CCDC180Q9P1Z9 1646 aa17.41■□□□□ 0.38
ZNF542P-206ENST00000490123 CHIC1Q5VXU3 224 aa17.4■□□□□ 0.38
ZNF542P-206ENST00000490123 ABCC9O60706 1549 aa17.24■□□□□ 0.35
ZNF542P-206ENST00000490123 LOC105371045A0A1W2PR82 267 aa17.23■□□□□ 0.35
ZNF542P-206ENST00000490123 EHMT2Q96KQ7 1210 aa17.18■□□□□ 0.34
ZNF542P-206ENST00000490123 MYO15BQ96JP2 1530 aa17.09■□□□□ 0.33
ZNF542P-206ENST00000490123 TRIM26Q12899 539 aaPredicted RBP17.06■□□□□ 0.32
ZNF542P-206ENST00000490123 PELP1Q8IZL8 1130 aaKnown RBP17.05■□□□□ 0.32
ZNF542P-206ENST00000490123 FAM9AQ8IZU1 332 aaPredicted RBP17.01■□□□□ 0.31
ZNF542P-206ENST00000490123 ZEB1P37275 1124 aaPredicted RBP16.94■□□□□ 0.3
ZNF542P-206ENST00000490123 ZCCHC6Q5VYS8 1495 aaKnown RBP16.89■□□□□ 0.29
ZNF542P-206ENST00000490123 TRIM41Q8WV44 630 aa16.78■□□□□ 0.28
ZNF542P-206ENST00000490123 DCAF1Q9Y4B6 1507 aa16.71■□□□□ 0.27
ZNF542P-206ENST00000490123 TTBK1Q5TCY1 1321 aaPredicted RBP16.69■□□□□ 0.26
ZNF542P-206ENST00000490123 SCAF1Q9H7N4 1312 aaKnown RBP16.68■□□□□ 0.26
ZNF542P-206ENST00000490123 CCER1Q8TC90 406 aaPredicted RBP16.68■□□□□ 0.26
ZNF542P-206ENST00000490123 CENPBP07199 599 aaPredicted RBP16.6■□□□□ 0.25
ZNF542P-206ENST00000490123 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.54■□□□□ 0.24
ZNF542P-206ENST00000490123 YTHDC1Q96MU7 727 aaKnown RBP16.47■□□□□ 0.23
ZNF542P-206ENST00000490123 GTF3C3Q9Y5Q9 886 aa16.46■□□□□ 0.23
ZNF542P-206ENST00000490123 SCRIBQ14160 1630 aa16.45■□□□□ 0.22
ZNF542P-206ENST00000490123 ACIN1Q9UKV3 1341 aaKnown RBP16.43■□□□□ 0.22
ZNF542P-206ENST00000490123 PABPN1Q86U42 306 aaKnown RBP eCLIP16.42■□□□□ 0.22
ZNF542P-206ENST00000490123 DIEXFQ68CQ4 756 aaKnown RBP16.41■□□□□ 0.22
ZNF542P-206ENST00000490123 NEUROD1Q13562 356 aa16.39■□□□□ 0.22
ZNF542P-206ENST00000490123 MYT1Q01538 1121 aa16.38■□□□□ 0.21
ZNF542P-206ENST00000490123 NACADO15069 1562 aa16.38■□□□□ 0.21
ZNF542P-206ENST00000490123 RB1CC1Q8TDY2 1594 aa16.35■□□□□ 0.21
ZNF542P-206ENST00000490123 UBTFP17480 764 aaKnown RBP16.13■□□□□ 0.17
ZNF542P-206ENST00000490123 HNRNPUL2Q1KMD3 747 aaKnown RBP16.06■□□□□ 0.16
ZNF542P-206ENST00000490123 RANGAP1P46060 587 aaPredicted RBP16.05■□□□□ 0.16
ZNF542P-206ENST00000490123 ZNF316A6NFI3 1004 aaPredicted RBP16.03■□□□□ 0.16
ZNF542P-206ENST00000490123 APLP2Q06481 763 aa16.01■□□□□ 0.15
ZNF542P-206ENST00000490123 UNC13AQ9UPW8 1703 aa16.01■□□□□ 0.15
ZNF542P-206ENST00000490123 RSF1Q96T23 1441 aaPredicted RBP15.97■□□□□ 0.15
ZNF542P-206ENST00000490123 CECR2Q9BXF3 1484 aa15.95■□□□□ 0.14
ZNF542P-206ENST00000490123 BICRAQ9NZM4 1560 aa15.91■□□□□ 0.14
ZNF542P-206ENST00000490123 MIER1Q8N108 512 aa15.9■□□□□ 0.14
ZNF542P-206ENST00000490123 MROH2BQ7Z745 1585 aa15.74■□□□□ 0.11
ZNF542P-206ENST00000490123 CSRNP3Q8WYN3 585 aa15.69■□□□□ 0.1
ZNF542P-206ENST00000490123 BCANQ96GW7 911 aa15.69■□□□□ 0.1
ZNF542P-206ENST00000490123 ITGAEP38570 1179 aa15.65■□□□□ 0.1
ZNF542P-206ENST00000490123 CEP162Q5TB80 1403 aa15.63■□□□□ 0.09
ZNF542P-206ENST00000490123 WIZO95785 1651 aa15.6■□□□□ 0.09
ZNF542P-206ENST00000490123 NEFLP07196 543 aa15.58■□□□□ 0.09
ZNF542P-206ENST00000490123 BAZ1AQ9NRL2 1556 aaPredicted RBP15.57■□□□□ 0.08
ZNF542P-206ENST00000490123 SMARCA4P51532 1647 aa15.54■□□□□ 0.08
ZNF542P-206ENST00000490123 SUPT16HQ9Y5B9 1047 aaKnown RBP15.52■□□□□ 0.07
ZNF542P-206ENST00000490123 EIF4G1Q04637 1599 aaKnown RBP15.5■□□□□ 0.07
ZNF542P-206ENST00000490123 ERICH6Q7L0X2 663 aa15.49■□□□□ 0.07
ZNF542P-206ENST00000490123 DNAJC5BQ9UF47 199 aa15.49■□□□□ 0.07
ZNF542P-206ENST00000490123 SOGA1O94964 1423 aa15.47■□□□□ 0.07
ZNF542P-206ENST00000490123 TNIKQ9UKE5 1360 aa15.47■□□□□ 0.07
ZNF542P-206ENST00000490123 FKBP8Q14318 412 aa15.44■□□□□ 0.06
ZNF542P-206ENST00000490123 CCDC88BA6NC98 1476 aa15.43■□□□□ 0.06
ZNF542P-206ENST00000490123 ANP32EQ9BTT0 268 aa15.42■□□□□ 0.06
ZNF542P-206ENST00000490123 CLSPNQ9HAW4 1339 aa15.42■□□□□ 0.06
ZNF542P-206ENST00000490123 ATAD2BQ9ULI0 1458 aa15.41■□□□□ 0.06
ZNF542P-206ENST00000490123 ABCC8Q09428 1581 aa15.41■□□□□ 0.06
ZNF542P-206ENST00000490123 ATP1B4Q9UN42 357 aaPredicted RBP15.41■□□□□ 0.06
ZNF542P-206ENST00000490123 WRNQ14191 1432 aaPredicted RBP eCLIP15.37■□□□□ 0.05
ZNF542P-206ENST00000490123 BAZ1BQ9UIG0 1483 aaKnown RBP15.37■□□□□ 0.05
ZNF542P-206ENST00000490123 TSHZ2Q9NRE2 1034 aa15.37■□□□□ 0.05
ZNF542P-206ENST00000490123 CC2D2AQ9P2K1 1620 aa15.36■□□□□ 0.05
ZNF542P-206ENST00000490123 CLIP1P30622 1438 aa15.35■□□□□ 0.05
ZNF542P-206ENST00000490123 DDX10Q13206 875 aaKnown RBP15.33■□□□□ 0.05
ZNF542P-206ENST00000490123 GOLGA3Q08378 1498 aa15.32■□□□□ 0.04
ZNF542P-206ENST00000490123 TRIM52Q96A61 297 aa15.3■□□□□ 0.04
ZNF542P-206ENST00000490123 BCL11AQ9H165 835 aa15.3■□□□□ 0.04
ZNF542P-206ENST00000490123 RUSC2Q8N2Y8 1516 aa15.29■□□□□ 0.04
ZNF542P-206ENST00000490123 SMARCA2P51531 1590 aa15.27■□□□□ 0.03
ZNF542P-206ENST00000490123 EEA1Q15075 1411 aa15.27■□□□□ 0.03
ZNF542P-206ENST00000490123 KCNH8Q96L42 1107 aa15.26■□□□□ 0.03
ZNF542P-206ENST00000490123 HIRIP3Q9BW71 556 aaPredicted RBP15.26■□□□□ 0.03
ZNF542P-206ENST00000490123 TOP2AP11388 1531 aaKnown RBP15.26■□□□□ 0.03
ZNF542P-206ENST00000490123 FAM50AQ14320 339 aaKnown RBP15.24■□□□□ 0.03
ZNF542P-206ENST00000490123 ANP32CO43423 234 aa15.22■□□□□ 0.03
ZNF542P-206ENST00000490123 NCAPD3P42695 1498 aa15.2■□□□□ 0.02
ZNF542P-206ENST00000490123 PEG3Q9GZU2 1588 aa15.16■□□□□ 0.02
ZNF542P-206ENST00000490123 CEP164Q9UPV0 1460 aa15.16■□□□□ 0.02
ZNF542P-206ENST00000490123 IRX6P78412 446 aaPredicted RBP15.15■□□□□ 0.02
ZNF542P-206ENST00000490123 CDK11AQ9UQ88 783 aaPredicted RBP15.15■□□□□ 0.02
ZNF542P-206ENST00000490123 VPS8Q8N3P4 1428 aa15.15■□□□□ 0.02
ZNF542P-206ENST00000490123 RBM19Q9Y4C8 960 aaKnown RBP15.14■□□□□ 0.01
ZNF542P-206ENST00000490123 KANK4Q5T7N3 995 aaPredicted RBP15.13■□□□□ 0.01
ZNF542P-206ENST00000490123 CNGB1Q14028 1251 aaPredicted RBP15.11■□□□□ 0.01
ZNF542P-206ENST00000490123 DHX57Q6P158 1386 aaKnown RBP15.11■□□□□ 0.01
ZNF542P-206ENST00000490123 SIN3AQ96ST3 1273 aa15.09■□□□□ 0.01
ZNF542P-206ENST00000490123 HNRNPUQ00839 825 aaKnown RBP eCLIP15.07■□□□□ 0
ZNF542P-206ENST00000490123 HMGXB3Q12766 1538 aa15.07■□□□□ 0
ZNF542P-206ENST00000490123 NESP48681 1621 aa15.06■□□□□ 0
ZNF542P-206ENST00000490123 P3H3Q8IVL6 736 aa15.04■□□□□ -0
ZNF542P-206ENST00000490123 RAPGEF2Q9Y4G8 1499 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms