RNA–Protein interactions for RNA: ENST00000489805.5

TFAP2A-216, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 5

Gene TFAP2A, Length 2,739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-216ENST00000489805 NISCHQ9Y2I1 1504 aa39.65■■■■□ 3.94
TFAP2A-216ENST00000489805 SHROOM4Q9ULL8 1493 aa35.12■■■■□ 3.21
TFAP2A-216ENST00000489805 SUPT5HO00267 1087 aaKnown RBP34.61■■■■□ 3.13
TFAP2A-216ENST00000489805 DCAF8L2P0C7V8 631 aa33.82■■■■□ 3
TFAP2A-216ENST00000489805 MYO15BQ96JP2 1530 aa33.6■■■□□ 2.97
TFAP2A-216ENST00000489805 ZCCHC6Q5VYS8 1495 aaKnown RBP33.54■■■□□ 2.96
TFAP2A-216ENST00000489805 CHIC1Q5VXU3 224 aa33.5■■■□□ 2.95
TFAP2A-216ENST00000489805 PCGF6Q9BYE7 350 aa33.25■■■□□ 2.91
TFAP2A-216ENST00000489805 CCDC180Q9P1Z9 1646 aa33.21■■■□□ 2.91
TFAP2A-216ENST00000489805 HRCP23327 699 aa33.19■■■□□ 2.9
TFAP2A-216ENST00000489805 PPARGC1BQ86YN6 1023 aaKnown RBP33.05■■■□□ 2.88
TFAP2A-216ENST00000489805 LOC105371045A0A1W2PR82 267 aa32.95■■■□□ 2.87
TFAP2A-216ENST00000489805 EHMT2Q96KQ7 1210 aa32.25■■■□□ 2.75
TFAP2A-216ENST00000489805 DCAF1Q9Y4B6 1507 aa32.18■■■□□ 2.74
TFAP2A-216ENST00000489805 FAM9AQ8IZU1 332 aaPredicted RBP32.13■■■□□ 2.73
TFAP2A-216ENST00000489805 TRIM26Q12899 539 aaPredicted RBP32.05■■■□□ 2.72
TFAP2A-216ENST00000489805 TRIM41Q8WV44 630 aa31.86■■■□□ 2.69
TFAP2A-216ENST00000489805 SCRIBQ14160 1630 aa31.79■■■□□ 2.68
TFAP2A-216ENST00000489805 RSF1Q96T23 1441 aaPredicted RBP31.76■■■□□ 2.67
TFAP2A-216ENST00000489805 ABCC9O60706 1549 aa31.71■■■□□ 2.67
TFAP2A-216ENST00000489805 RB1CC1Q8TDY2 1594 aa31.57■■■□□ 2.64
TFAP2A-216ENST00000489805 CECR2Q9BXF3 1484 aa31.32■■■□□ 2.6
TFAP2A-216ENST00000489805 ZEB1P37275 1124 aaPredicted RBP31.23■■■□□ 2.59
TFAP2A-216ENST00000489805 TTBK1Q5TCY1 1321 aaPredicted RBP31.23■■■□□ 2.59
TFAP2A-216ENST00000489805 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.16■■■□□ 2.58
TFAP2A-216ENST00000489805 SCAF1Q9H7N4 1312 aaKnown RBP31.13■■■□□ 2.57
TFAP2A-216ENST00000489805 MROH2BQ7Z745 1585 aa31.1■■■□□ 2.57
TFAP2A-216ENST00000489805 WIZO95785 1651 aa30.97■■■□□ 2.55
TFAP2A-216ENST00000489805 CCER1Q8TC90 406 aaPredicted RBP30.89■■■□□ 2.54
TFAP2A-216ENST00000489805 NACADO15069 1562 aa30.63■■■□□ 2.49
TFAP2A-216ENST00000489805 ABCC8Q09428 1581 aa30.63■■■□□ 2.49
TFAP2A-216ENST00000489805 NEUROD1Q13562 356 aa30.61■■■□□ 2.49
TFAP2A-216ENST00000489805 CCDC88BA6NC98 1476 aa30.56■■■□□ 2.48
TFAP2A-216ENST00000489805 DIEXFQ68CQ4 756 aaKnown RBP30.47■■■□□ 2.47
TFAP2A-216ENST00000489805 SOGA1O94964 1423 aa30.47■■■□□ 2.47
TFAP2A-216ENST00000489805 ACIN1Q9UKV3 1341 aaKnown RBP30.45■■■□□ 2.46
TFAP2A-216ENST00000489805 BAZ1AQ9NRL2 1556 aaPredicted RBP30.43■■■□□ 2.46
TFAP2A-216ENST00000489805 UBTFP17480 764 aaKnown RBP30.4■■■□□ 2.46
TFAP2A-216ENST00000489805 EIF4G1Q04637 1599 aaKnown RBP30.39■■■□□ 2.46
TFAP2A-216ENST00000489805 RUSC2Q8N2Y8 1516 aa30.38■■■□□ 2.45
TFAP2A-216ENST00000489805 CEP162Q5TB80 1403 aa30.35■■■□□ 2.45
TFAP2A-216ENST00000489805 GTF3C3Q9Y5Q9 886 aa30.33■■■□□ 2.45
TFAP2A-216ENST00000489805 PELP1Q8IZL8 1130 aaKnown RBP30.25■■■□□ 2.43
TFAP2A-216ENST00000489805 RANGAP1P46060 587 aaPredicted RBP30.23■■■□□ 2.43
TFAP2A-216ENST00000489805 PABPN1Q86U42 306 aaKnown RBP eCLIP30.23■■■□□ 2.43
TFAP2A-216ENST00000489805 YTHDC1Q96MU7 727 aaKnown RBP30.22■■■□□ 2.43
TFAP2A-216ENST00000489805 CSRNP3Q8WYN3 585 aa30.2■■■□□ 2.43
TFAP2A-216ENST00000489805 HNRNPUL2Q1KMD3 747 aaKnown RBP30.19■■■□□ 2.42
TFAP2A-216ENST00000489805 TOP2AP11388 1531 aaKnown RBP30.14■■■□□ 2.42
TFAP2A-216ENST00000489805 SMARCA2P51531 1590 aa30.13■■■□□ 2.41
TFAP2A-216ENST00000489805 WRNQ14191 1432 aaPredicted RBP eCLIP30.09■■■□□ 2.41
TFAP2A-216ENST00000489805 SMARCA4P51532 1647 aa30.07■■■□□ 2.4
TFAP2A-216ENST00000489805 TNIKQ9UKE5 1360 aa30.07■■■□□ 2.4
TFAP2A-216ENST00000489805 CENPBP07199 599 aaPredicted RBP30.02■■■□□ 2.4
TFAP2A-216ENST00000489805 ZNF316A6NFI3 1004 aaPredicted RBP29.99■■■□□ 2.39
TFAP2A-216ENST00000489805 MIER1Q8N108 512 aa29.9■■■□□ 2.38
TFAP2A-216ENST00000489805 UNC13AQ9UPW8 1703 aa29.82■■■□□ 2.36
TFAP2A-216ENST00000489805 GOLGA3Q08378 1498 aa29.8■■■□□ 2.36
TFAP2A-216ENST00000489805 EEA1Q15075 1411 aa29.68■■■□□ 2.34
TFAP2A-216ENST00000489805 CLIP1P30622 1438 aa29.67■■■□□ 2.34
TFAP2A-216ENST00000489805 SYNJ1O43426 1573 aa29.66■■■□□ 2.34
TFAP2A-216ENST00000489805 APLP2Q06481 763 aa29.61■■■□□ 2.33
TFAP2A-216ENST00000489805 RAPGEF2Q9Y4G8 1499 aa29.59■■■□□ 2.33
TFAP2A-216ENST00000489805 CEP164Q9UPV0 1460 aa29.54■■■□□ 2.32
TFAP2A-216ENST00000489805 BICRAQ9NZM4 1560 aa29.48■■■□□ 2.31
TFAP2A-216ENST00000489805 VPS8Q8N3P4 1428 aa29.46■■■□□ 2.31
TFAP2A-216ENST00000489805 KANK4Q5T7N3 995 aaPredicted RBP29.41■■■□□ 2.3
TFAP2A-216ENST00000489805 ITGAEP38570 1179 aa29.36■■■□□ 2.29
TFAP2A-216ENST00000489805 KIF21BO75037 1637 aa29.34■■■□□ 2.29
TFAP2A-216ENST00000489805 ATAD2BQ9ULI0 1458 aa29.31■■■□□ 2.28
TFAP2A-216ENST00000489805 BAZ1BQ9UIG0 1483 aaKnown RBP29.27■■■□□ 2.28
TFAP2A-216ENST00000489805 PEG3Q9GZU2 1588 aa29.21■■■□□ 2.27
TFAP2A-216ENST00000489805 DHX57Q6P158 1386 aaKnown RBP29.21■■■□□ 2.27
TFAP2A-216ENST00000489805 KCNH8Q96L42 1107 aa29.1■■■□□ 2.25
TFAP2A-216ENST00000489805 ARAP1Q96P48 1450 aa29.09■■■□□ 2.25
TFAP2A-216ENST00000489805 TOP2BQ02880 1626 aa28.99■■■□□ 2.23
TFAP2A-216ENST00000489805 SUPT16HQ9Y5B9 1047 aaKnown RBP28.98■■■□□ 2.23
TFAP2A-216ENST00000489805 PRXQ9BXM0 1461 aa28.94■■■□□ 2.22
TFAP2A-216ENST00000489805 HIRIP3Q9BW71 556 aaPredicted RBP28.86■■■□□ 2.21
TFAP2A-216ENST00000489805 CUX1P39880 1505 aa28.85■■■□□ 2.21
TFAP2A-216ENST00000489805 P3H3Q8IVL6 736 aa28.84■■■□□ 2.21
TFAP2A-216ENST00000489805 BCANQ96GW7 911 aa28.82■■■□□ 2.2
TFAP2A-216ENST00000489805 SIN3AQ96ST3 1273 aa28.82■■■□□ 2.2
TFAP2A-216ENST00000489805 ATP1B4Q9UN42 357 aaPredicted RBP28.82■■■□□ 2.2
TFAP2A-216ENST00000489805 CCNB3Q8WWL7 1395 aa28.81■■■□□ 2.2
TFAP2A-216ENST00000489805 CLSPNQ9HAW4 1339 aa28.79■■■□□ 2.2
TFAP2A-216ENST00000489805 ARHGAP35Q9NRY4 1499 aa28.78■■■□□ 2.2
TFAP2A-216ENST00000489805 RRBP1Q9P2E9 1410 aaKnown RBP28.77■■■□□ 2.2
TFAP2A-216ENST00000489805 BIVM-ERCC5R4GMW8 1640 aa28.76■■■□□ 2.2
TFAP2A-216ENST00000489805 ERICH3Q5RHP9 1530 aa28.75■■■□□ 2.19
TFAP2A-216ENST00000489805 KIF27Q86VH2 1401 aa28.74■■■□□ 2.19
TFAP2A-216ENST00000489805 RAB3GAP2Q9H2M9 1393 aa28.74■■■□□ 2.19
TFAP2A-216ENST00000489805 DDX10Q13206 875 aaKnown RBP28.73■■■□□ 2.19
TFAP2A-216ENST00000489805 FAM50AQ14320 339 aaKnown RBP28.73■■■□□ 2.19
TFAP2A-216ENST00000489805 TSHZ2Q9NRE2 1034 aa28.63■■■□□ 2.17
TFAP2A-216ENST00000489805 MYT1Q01538 1121 aa28.6■■■□□ 2.17
TFAP2A-216ENST00000489805 MAPKBP1O60336 1514 aa28.58■■■□□ 2.17
TFAP2A-216ENST00000489805 CUX2O14529 1486 aa28.57■■■□□ 2.16
TFAP2A-216ENST00000489805 PHLDB1Q86UU1 1377 aa28.56■■■□□ 2.16
TFAP2A-216ENST00000489805 IGF1RP08069 1367 aa28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms