RNA–Protein interactions for RNA: ENST00000488498.2

C1orf61-218, Transcript of chromosome 1 open reading frame 61, humanhuman

Gene C1orf61, Length 4,774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf61-218ENST00000488498 NISCHQ9Y2I1 1504 aa22.13■■□□□ 1.13
C1orf61-218ENST00000488498 DCAF8L2P0C7V8 631 aa21.34■■□□□ 1.01
C1orf61-218ENST00000488498 SHROOM4Q9ULL8 1493 aa19.47■□□□□ 0.71
C1orf61-218ENST00000488498 SUPT5HO00267 1087 aaKnown RBP19.42■□□□□ 0.7
C1orf61-218ENST00000488498 FAM9AQ8IZU1 332 aaPredicted RBP19.37■□□□□ 0.69
C1orf61-218ENST00000488498 ABCC9O60706 1549 aa19.29■□□□□ 0.68
C1orf61-218ENST00000488498 CCDC180Q9P1Z9 1646 aa18.97■□□□□ 0.63
C1orf61-218ENST00000488498 APLP2Q06481 763 aa18.69■□□□□ 0.58
C1orf61-218ENST00000488498 PABPN1Q86U42 306 aaKnown RBP eCLIP18.62■□□□□ 0.57
C1orf61-218ENST00000488498 RB1CC1Q8TDY2 1594 aa18.55■□□□□ 0.56
C1orf61-218ENST00000488498 TRIM41Q8WV44 630 aa18.41■□□□□ 0.54
C1orf61-218ENST00000488498 NACADO15069 1562 aa18.39■□□□□ 0.53
C1orf61-218ENST00000488498 ZCCHC6Q5VYS8 1495 aaKnown RBP18.3■□□□□ 0.52
C1orf61-218ENST00000488498 SCRIBQ14160 1630 aa18.2■□□□□ 0.5
C1orf61-218ENST00000488498 EHMT2Q96KQ7 1210 aa18.13■□□□□ 0.49
C1orf61-218ENST00000488498 UBTFP17480 764 aaKnown RBP18.12■□□□□ 0.49
C1orf61-218ENST00000488498 ATP1B4Q9UN42 357 aaPredicted RBP18.05■□□□□ 0.48
C1orf61-218ENST00000488498 DCAF1Q9Y4B6 1507 aa17.99■□□□□ 0.47
C1orf61-218ENST00000488498 RANGAP1P46060 587 aaPredicted RBP17.9■□□□□ 0.46
C1orf61-218ENST00000488498 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.85■□□□□ 0.45
C1orf61-218ENST00000488498 HNRNPUL2Q1KMD3 747 aaKnown RBP17.85■□□□□ 0.45
C1orf61-218ENST00000488498 MYO15BQ96JP2 1530 aa17.83■□□□□ 0.45
C1orf61-218ENST00000488498 MYT1LQ9UL68 1186 aa17.76■□□□□ 0.43
C1orf61-218ENST00000488498 FBLN2P98095 1184 aa17.72■□□□□ 0.43
C1orf61-218ENST00000488498 TTBK1Q5TCY1 1321 aaPredicted RBP17.64■□□□□ 0.42
C1orf61-218ENST00000488498 BAZ1BQ9UIG0 1483 aaKnown RBP17.62■□□□□ 0.41
C1orf61-218ENST00000488498 ERCC6Q03468 1493 aa17.56■□□□□ 0.4
C1orf61-218ENST00000488498 NPM1P06748 294 aaKnown RBP eCLIP17.56■□□□□ 0.4
C1orf61-218ENST00000488498 BAZ1AQ9NRL2 1556 aaPredicted RBP17.55■□□□□ 0.4
C1orf61-218ENST00000488498 CDK11AQ9UQ88 783 aaPredicted RBP17.44■□□□□ 0.38
C1orf61-218ENST00000488498 SMARCA2P51531 1590 aa17.44■□□□□ 0.38
C1orf61-218ENST00000488498 CHIC1Q5VXU3 224 aa17.37■□□□□ 0.37
C1orf61-218ENST00000488498 CHMP7Q8WUX9 453 aaPredicted RBP17.37■□□□□ 0.37
C1orf61-218ENST00000488498 PDS5BQ9NTI5 1447 aa17.35■□□□□ 0.37
C1orf61-218ENST00000488498 CSRNP3Q8WYN3 585 aa17.28■□□□□ 0.36
C1orf61-218ENST00000488498 CECR2Q9BXF3 1484 aa17.28■□□□□ 0.36
C1orf61-218ENST00000488498 RSF1Q96T23 1441 aaPredicted RBP17.25■□□□□ 0.35
C1orf61-218ENST00000488498 ZEB1P37275 1124 aaPredicted RBP17.22■□□□□ 0.35
C1orf61-218ENST00000488498 ESF1Q9H501 851 aaKnown RBP17.19■□□□□ 0.34
C1orf61-218ENST00000488498 EEA1Q15075 1411 aa17.12■□□□□ 0.33
C1orf61-218ENST00000488498 CCER1Q8TC90 406 aaPredicted RBP17.11■□□□□ 0.33
C1orf61-218ENST00000488498 PCGF6Q9BYE7 350 aa17.08■□□□□ 0.32
C1orf61-218ENST00000488498 KIF27Q86VH2 1401 aa17.06■□□□□ 0.32
C1orf61-218ENST00000488498 WRNQ14191 1432 aaPredicted RBP eCLIP17.05■□□□□ 0.32
C1orf61-218ENST00000488498 ITGAEP38570 1179 aa17.03■□□□□ 0.32
C1orf61-218ENST00000488498 FAM50AQ14320 339 aaKnown RBP17.01■□□□□ 0.31
C1orf61-218ENST00000488498 CADPSQ9ULU8 1353 aa17.01■□□□□ 0.31
C1orf61-218ENST00000488498 ABCC8Q09428 1581 aa16.98■□□□□ 0.31
C1orf61-218ENST00000488498 ATAD2BQ9ULI0 1458 aa16.97■□□□□ 0.31
C1orf61-218ENST00000488498 P3H3Q8IVL6 736 aa16.93■□□□□ 0.3
C1orf61-218ENST00000488498 PELP1Q8IZL8 1130 aaKnown RBP16.92■□□□□ 0.3
C1orf61-218ENST00000488498 CEP164Q9UPV0 1460 aa16.91■□□□□ 0.3
C1orf61-218ENST00000488498 TRIM26Q12899 539 aaPredicted RBP16.91■□□□□ 0.3
C1orf61-218ENST00000488498 TRIM52Q96A61 297 aa16.89■□□□□ 0.3
C1orf61-218ENST00000488498 TOP2AP11388 1531 aaKnown RBP16.89■□□□□ 0.29
C1orf61-218ENST00000488498 ACIN1Q9UKV3 1341 aaKnown RBP16.89■□□□□ 0.29
C1orf61-218ENST00000488498 SMARCA4P51532 1647 aa16.87■□□□□ 0.29
C1orf61-218ENST00000488498 MROH2BQ7Z745 1585 aa16.87■□□□□ 0.29
C1orf61-218ENST00000488498 PLEKHD1A6NEE1 506 aa16.86■□□□□ 0.29
C1orf61-218ENST00000488498 NCAPD3P42695 1498 aa16.86■□□□□ 0.29
C1orf61-218ENST00000488498 LOC105371045A0A1W2PR82 267 aa16.85■□□□□ 0.29
C1orf61-218ENST00000488498 ZNF777Q9ULD5 760 aaPredicted RBP16.84■□□□□ 0.29
C1orf61-218ENST00000488498 EIF4G1Q04637 1599 aaKnown RBP16.84■□□□□ 0.29
C1orf61-218ENST00000488498 CARMIL2Q6F5E8 1435 aa16.82■□□□□ 0.28
C1orf61-218ENST00000488498 TSPY4P0CV99 314 aa16.79■□□□□ 0.28
C1orf61-218ENST00000488498 TSPY10P0CW01 314 aa16.79■□□□□ 0.28
C1orf61-218ENST00000488498 SOGA1O94964 1423 aa16.79■□□□□ 0.28
C1orf61-218ENST00000488498 ARID3CA6NKF2 412 aa16.79■□□□□ 0.28
C1orf61-218ENST00000488498 BCANQ96GW7 911 aa16.78■□□□□ 0.28
C1orf61-218ENST00000488498 STAG3Q9UJ98 1225 aa16.76■□□□□ 0.27
C1orf61-218ENST00000488498 CCDC88BA6NC98 1476 aa16.76■□□□□ 0.27
C1orf61-218ENST00000488498 CUX2O14529 1486 aa16.75■□□□□ 0.27
C1orf61-218ENST00000488498 MTUS2Q5JR59 1369 aa16.75■□□□□ 0.27
C1orf61-218ENST00000488498 PPARGC1BQ86YN6 1023 aaKnown RBP16.75■□□□□ 0.27
C1orf61-218ENST00000488498 GOLGA3Q08378 1498 aa16.74■□□□□ 0.27
C1orf61-218ENST00000488498 TRHP20396 242 aaPredicted RBP16.73■□□□□ 0.27
C1orf61-218ENST00000488498 FANCD2Q9BXW9 1451 aa16.71■□□□□ 0.27
C1orf61-218ENST00000488498 CARMIL1Q5VZK9 1371 aa16.69■□□□□ 0.26
C1orf61-218ENST00000488498 OSCARQ8IYS5 282 aa16.69■□□□□ 0.26
C1orf61-218ENST00000488498 SLC4A1APQ9BWU0 796 aaKnown RBP16.63■□□□□ 0.25
C1orf61-218ENST00000488498 HMGXB3Q12766 1538 aa16.63■□□□□ 0.25
C1orf61-218ENST00000488498 CLIP1P30622 1438 aa16.63■□□□□ 0.25
C1orf61-218ENST00000488498 KCNH8Q96L42 1107 aa16.63■□□□□ 0.25
C1orf61-218ENST00000488498 CC2D2AQ9P2K1 1620 aa16.61■□□□□ 0.25
C1orf61-218ENST00000488498 FHAD1B1AJZ9 1412 aa16.61■□□□□ 0.25
C1orf61-218ENST00000488498 ARID4BQ4LE39 1312 aaPredicted RBP16.58■□□□□ 0.24
C1orf61-218ENST00000488498 POLR3GLQ9BT43 218 aa16.57■□□□□ 0.24
C1orf61-218ENST00000488498 WIZO95785 1651 aa16.55■□□□□ 0.24
C1orf61-218ENST00000488498 TDRD9Q8NDG6 1382 aaKnown RBP16.55■□□□□ 0.24
C1orf61-218ENST00000488498 MRC2Q9UBG0 1479 aa16.51■□□□□ 0.23
C1orf61-218ENST00000488498 CFDP1Q9UEE9 299 aaPredicted RBP16.49■□□□□ 0.23
C1orf61-218ENST00000488498 CHGAP10645 457 aaKnown RBP16.48■□□□□ 0.23
C1orf61-218ENST00000488498 TNIKQ9UKE5 1360 aa16.48■□□□□ 0.23
C1orf61-218ENST00000488498 PLPPR3Q6T4P5 718 aa16.43■□□□□ 0.22
C1orf61-218ENST00000488498 IFT140Q96RY7 1462 aa16.42■□□□□ 0.22
C1orf61-218ENST00000488498 FMN1Q68DA7 1419 aa16.42■□□□□ 0.22
C1orf61-218ENST00000488498 HDGFP51858 240 aaKnown RBP16.42■□□□□ 0.22
C1orf61-218ENST00000488498 CENPBP07199 599 aaPredicted RBP16.41■□□□□ 0.22
C1orf61-218ENST00000488498 MYT1Q01538 1121 aa16.41■□□□□ 0.22
C1orf61-218ENST00000488498 CCNB3Q8WWL7 1395 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms