RNA–Protein interactions for RNA: ENST00000488089.1

LAMA1-204, Transcript of laminin subunit alpha 1, humanhuman

TSL 2

Gene LAMA1, Length 4,577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1-204ENST00000488089 NISCHQ9Y2I1 1504 aa16.33■□□□□ 0.2
LAMA1-204ENST00000488089 DCAF8L2P0C7V8 631 aa16.23■□□□□ 0.19
LAMA1-204ENST00000488089 FAM9AQ8IZU1 332 aaPredicted RBP15.26■□□□□ 0.03
LAMA1-204ENST00000488089 SUPT5HO00267 1087 aaKnown RBP15.05■□□□□ 0
LAMA1-204ENST00000488089 PELP1Q8IZL8 1130 aaKnown RBP15.05■□□□□ -0
LAMA1-204ENST00000488089 APLP2Q06481 763 aa14.98□□□□□ -0.01
LAMA1-204ENST00000488089 SHROOM4Q9ULL8 1493 aa14.97□□□□□ -0.01
LAMA1-204ENST00000488089 EHMT2Q96KQ7 1210 aa14.42□□□□□ -0.1
LAMA1-204ENST00000488089 CCER1Q8TC90 406 aaPredicted RBP14.39□□□□□ -0.11
LAMA1-204ENST00000488089 PCGF6Q9BYE7 350 aa14.24□□□□□ -0.13
LAMA1-204ENST00000488089 ATP1B4Q9UN42 357 aaPredicted RBP14.21□□□□□ -0.14
LAMA1-204ENST00000488089 ERICH6Q7L0X2 663 aa14.15□□□□□ -0.14
LAMA1-204ENST00000488089 ZEB1P37275 1124 aaPredicted RBP14.15□□□□□ -0.14
LAMA1-204ENST00000488089 CENPBP07199 599 aaPredicted RBP14.11□□□□□ -0.15
LAMA1-204ENST00000488089 TRIM41Q8WV44 630 aa14.1□□□□□ -0.15
LAMA1-204ENST00000488089 UBTFP17480 764 aaKnown RBP14.07□□□□□ -0.16
LAMA1-204ENST00000488089 RANGAP1P46060 587 aaPredicted RBP14.02□□□□□ -0.17
LAMA1-204ENST00000488089 NEFLP07196 543 aa14.02□□□□□ -0.17
LAMA1-204ENST00000488089 CHIC1Q5VXU3 224 aa13.99□□□□□ -0.17
LAMA1-204ENST00000488089 MYT1LQ9UL68 1186 aa13.98□□□□□ -0.17
LAMA1-204ENST00000488089 TTBK1Q5TCY1 1321 aaPredicted RBP13.95□□□□□ -0.18
LAMA1-204ENST00000488089 HRCP23327 699 aa13.92□□□□□ -0.18
LAMA1-204ENST00000488089 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.85□□□□□ -0.19
LAMA1-204ENST00000488089 HNRNPUL2Q1KMD3 747 aaKnown RBP13.85□□□□□ -0.19
LAMA1-204ENST00000488089 TRIM26Q12899 539 aaPredicted RBP13.82□□□□□ -0.2
LAMA1-204ENST00000488089 LOC105371045A0A1W2PR82 267 aa13.75□□□□□ -0.21
LAMA1-204ENST00000488089 DAXXQ9UER7 740 aaPredicted RBP13.74□□□□□ -0.21
LAMA1-204ENST00000488089 ZCCHC6Q5VYS8 1495 aaKnown RBP13.68□□□□□ -0.22
LAMA1-204ENST00000488089 ABCC9O60706 1549 aa13.67□□□□□ -0.22
LAMA1-204ENST00000488089 YTHDC1Q96MU7 727 aaKnown RBP13.57□□□□□ -0.24
LAMA1-204ENST00000488089 MYT1Q01538 1121 aa13.56□□□□□ -0.24
LAMA1-204ENST00000488089 PABPN1Q86U42 306 aaKnown RBP eCLIP13.56□□□□□ -0.24
LAMA1-204ENST00000488089 POLR3GLQ9BT43 218 aa13.55□□□□□ -0.24
LAMA1-204ENST00000488089 PPARGC1BQ86YN6 1023 aaKnown RBP13.55□□□□□ -0.24
LAMA1-204ENST00000488089 CCDC180Q9P1Z9 1646 aa13.55□□□□□ -0.24
LAMA1-204ENST00000488089 SLC4A1APQ9BWU0 796 aaKnown RBP13.51□□□□□ -0.25
LAMA1-204ENST00000488089 ITGAEP38570 1179 aa13.47□□□□□ -0.25
LAMA1-204ENST00000488089 ZBTB47Q9UFB7 747 aaPredicted RBP13.39□□□□□ -0.27
LAMA1-204ENST00000488089 CLSPNQ9HAW4 1339 aa13.38□□□□□ -0.27
LAMA1-204ENST00000488089 DCAF1Q9Y4B6 1507 aa13.36□□□□□ -0.27
LAMA1-204ENST00000488089 NEFMP07197 916 aa13.34□□□□□ -0.27
LAMA1-204ENST00000488089 ZNF316A6NFI3 1004 aaPredicted RBP13.29□□□□□ -0.28
LAMA1-204ENST00000488089 TRIM52Q96A61 297 aa13.27□□□□□ -0.29
LAMA1-204ENST00000488089 ESF1Q9H501 851 aaKnown RBP13.27□□□□□ -0.29
LAMA1-204ENST00000488089 MYO15BQ96JP2 1530 aa13.26□□□□□ -0.29
LAMA1-204ENST00000488089 SCRIBQ14160 1630 aa13.22□□□□□ -0.29
LAMA1-204ENST00000488089 FAM50AQ14320 339 aaKnown RBP13.22□□□□□ -0.29
LAMA1-204ENST00000488089 RTL5Q5HYW3 569 aaPredicted RBP13.21□□□□□ -0.3
LAMA1-204ENST00000488089 BCANQ96GW7 911 aa13.2□□□□□ -0.3
LAMA1-204ENST00000488089 FBLN2P98095 1184 aa13.2□□□□□ -0.3
LAMA1-204ENST00000488089 CDK11AQ9UQ88 783 aaPredicted RBP13.2□□□□□ -0.3
LAMA1-204ENST00000488089 DIEXFQ68CQ4 756 aaKnown RBP13.19□□□□□ -0.3
LAMA1-204ENST00000488089 CNGB1Q14028 1251 aaPredicted RBP13.18□□□□□ -0.3
LAMA1-204ENST00000488089 NPM1P06748 294 aaKnown RBP eCLIP13.16□□□□□ -0.3
LAMA1-204ENST00000488089 SLC24A1O60721 1099 aa13.09□□□□□ -0.31
LAMA1-204ENST00000488089 RSF1Q96T23 1441 aaPredicted RBP13.07□□□□□ -0.32
LAMA1-204ENST00000488089 CSRNP3Q8WYN3 585 aa13.05□□□□□ -0.32
LAMA1-204ENST00000488089 CANXP27824 592 aaKnown RBP13.04□□□□□ -0.32
LAMA1-204ENST00000488089 ANP32CO43423 234 aa13.03□□□□□ -0.32
LAMA1-204ENST00000488089 STAG3Q9UJ98 1225 aa13.03□□□□□ -0.32
LAMA1-204ENST00000488089 ZNF326Q5BKZ1 582 aaKnown RBP13.02□□□□□ -0.33
LAMA1-204ENST00000488089 NEUROD1Q13562 356 aa12.96□□□□□ -0.33
LAMA1-204ENST00000488089 GTF3C3Q9Y5Q9 886 aa12.95□□□□□ -0.34
LAMA1-204ENST00000488089 ACIN1Q9UKV3 1341 aaKnown RBP12.94□□□□□ -0.34
LAMA1-204ENST00000488089 NPM2Q86SE8 214 aaKnown RBP12.9□□□□□ -0.34
LAMA1-204ENST00000488089 RB1CC1Q8TDY2 1594 aa12.89□□□□□ -0.35
LAMA1-204ENST00000488089 NACADO15069 1562 aa12.89□□□□□ -0.35
LAMA1-204ENST00000488089 ZNF777Q9ULD5 760 aaPredicted RBP12.87□□□□□ -0.35
LAMA1-204ENST00000488089 CHGAP10645 457 aaKnown RBP12.84□□□□□ -0.35
LAMA1-204ENST00000488089 ANP32BQ92688 251 aaKnown RBP12.81□□□□□ -0.36
LAMA1-204ENST00000488089 EEA1Q15075 1411 aa12.81□□□□□ -0.36
LAMA1-204ENST00000488089 UPF2Q9HAU5 1272 aaKnown RBP12.79□□□□□ -0.36
LAMA1-204ENST00000488089 TSPY4P0CV99 314 aa12.79□□□□□ -0.36
LAMA1-204ENST00000488089 TSPY10P0CW01 314 aa12.79□□□□□ -0.36
LAMA1-204ENST00000488089 CEP162Q5TB80 1403 aa12.77□□□□□ -0.37
LAMA1-204ENST00000488089 CECR2Q9BXF3 1484 aa12.75□□□□□ -0.37
LAMA1-204ENST00000488089 HSP90AA1P07900 732 aaKnown RBP12.74□□□□□ -0.37
LAMA1-204ENST00000488089 P3H3Q8IVL6 736 aa12.74□□□□□ -0.37
LAMA1-204ENST00000488089 BCL11AQ9H165 835 aa12.74□□□□□ -0.37
LAMA1-204ENST00000488089 BAZ1AQ9NRL2 1556 aaPredicted RBP12.74□□□□□ -0.37
LAMA1-204ENST00000488089 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.73□□□□□ -0.37
LAMA1-204ENST00000488089 SCAF1Q9H7N4 1312 aaKnown RBP12.72□□□□□ -0.37
LAMA1-204ENST00000488089 GOLGA3Q08378 1498 aa12.72□□□□□ -0.37
LAMA1-204ENST00000488089 CDK11BP21127 795 aaKnown RBP12.72□□□□□ -0.37
LAMA1-204ENST00000488089 ANP32AP39687 249 aaKnown RBP12.72□□□□□ -0.37
LAMA1-204ENST00000488089 TNIKQ9UKE5 1360 aa12.71□□□□□ -0.37
LAMA1-204ENST00000488089 CLIP1P30622 1438 aa12.71□□□□□ -0.37
LAMA1-204ENST00000488089 ARID3CA6NKF2 412 aa12.7□□□□□ -0.38
LAMA1-204ENST00000488089 TONSLQ96HA7 1378 aa12.69□□□□□ -0.38
LAMA1-204ENST00000488089 WRNQ14191 1432 aaPredicted RBP eCLIP12.67□□□□□ -0.38
LAMA1-204ENST00000488089 PLPPR3Q6T4P5 718 aa12.67□□□□□ -0.38
LAMA1-204ENST00000488089 CHMP7Q8WUX9 453 aaPredicted RBP12.66□□□□□ -0.38
LAMA1-204ENST00000488089 MROH2BQ7Z745 1585 aa12.66□□□□□ -0.38
LAMA1-204ENST00000488089 PPP1R15AO75807 674 aaPredicted RBP12.64□□□□□ -0.39
LAMA1-204ENST00000488089 C14orf37Q86TY3 774 aa12.62□□□□□ -0.39
LAMA1-204ENST00000488089 MYH16Q9H6N6 1097 aa12.62□□□□□ -0.39
LAMA1-204ENST00000488089 CEP164Q9UPV0 1460 aa12.62□□□□□ -0.39
LAMA1-204ENST00000488089 EIF5BO60841 1220 aaKnown RBP12.61□□□□□ -0.39
LAMA1-204ENST00000488089 HAP1P54257 671 aaPredicted RBP12.61□□□□□ -0.39
LAMA1-204ENST00000488089 WDR43Q15061 677 aaKnown RBP eCLIP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms