RNA–Protein interactions for RNA: ENST00000487232.1

CASP7-209, Transcript of caspase 7, humanhuman

TSL 2

Gene CASP7, Length 799 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP7-209ENST00000487232 AEBP2Q6ZN18 517 aaPredicted RBP20.81■□□□□ 0.92
CASP7-209ENST00000487232 CHIC1Q5VXU3 224 aa19.57■□□□□ 0.72
CASP7-209ENST00000487232 SENP3Q9H4L4 574 aaPredicted RBP17.69■□□□□ 0.42
CASP7-209ENST00000487232 PHF23Q9BUL5 403 aaPredicted RBP17.48■□□□□ 0.39
CASP7-209ENST00000487232 FOXD1Q16676 465 aa16.55■□□□□ 0.24
CASP7-209ENST00000487232 PLPPR3Q6T4P5 718 aa15.56■□□□□ 0.08
CASP7-209ENST00000487232 MSH5O43196 834 aa15.48■□□□□ 0.07
CASP7-209ENST00000487232 PIAS4Q8N2W9 510 aaPredicted RBP15.46■□□□□ 0.07
CASP7-209ENST00000487232 PPP6R1Q9UPN7 881 aa15.41■□□□□ 0.06
CASP7-209ENST00000487232 POTEDQ86YR6 584 aa15.39■□□□□ 0.05
CASP7-209ENST00000487232 ADRA2BP18089 450 aa15.37■□□□□ 0.05
CASP7-209ENST00000487232 NISCHQ9Y2I1 1504 aa15.14■□□□□ 0.01
CASP7-209ENST00000487232 MAPK8IP2Q13387 824 aaPredicted RBP14.17□□□□□ -0.14
CASP7-209ENST00000487232 DMRT2Q9Y5R5 561 aa14.02□□□□□ -0.17
CASP7-209ENST00000487232 SLC24A1O60721 1099 aa13.97□□□□□ -0.17
CASP7-209ENST00000487232 SCAF1Q9H7N4 1312 aaKnown RBP13.94□□□□□ -0.18
CASP7-209ENST00000487232 EHMT2Q96KQ7 1210 aa13.9□□□□□ -0.18
CASP7-209ENST00000487232 PPP4R3CPQ6ZMV5 832 aa13.66□□□□□ -0.22
CASP7-209ENST00000487232 CCDC180Q9P1Z9 1646 aa13.58□□□□□ -0.24
CASP7-209ENST00000487232 DCAF8L1A6NGE4 600 aa13.55□□□□□ -0.24
CASP7-209ENST00000487232 ABCC9O60706 1549 aa13.54□□□□□ -0.24
CASP7-209ENST00000487232 CACNB1Q02641 598 aaPredicted RBP13.43□□□□□ -0.26
CASP7-209ENST00000487232 HOXD11P31277 338 aaPredicted RBP13.42□□□□□ -0.26
CASP7-209ENST00000487232 CNKSR2Q8WXI2 1034 aa13.39□□□□□ -0.27
CASP7-209ENST00000487232 RNF216Q9NWF9 866 aaPredicted RBP13.29□□□□□ -0.28
CASP7-209ENST00000487232 RNF39Q9H2S5 420 aa13.23□□□□□ -0.29
CASP7-209ENST00000487232 KCNA4P22459 653 aa13.16□□□□□ -0.3
CASP7-209ENST00000487232 CSRNP3Q8WYN3 585 aa13.1□□□□□ -0.31
CASP7-209ENST00000487232 NCBP3Q53F19 620 aaKnown RBP13.05□□□□□ -0.32
CASP7-209ENST00000487232 RTN4Q9NQC3 1192 aaKnown RBP13□□□□□ -0.33
CASP7-209ENST00000487232 AMER1Q5JTC6 1135 aaPredicted RBP12.99□□□□□ -0.33
CASP7-209ENST00000487232 C1QBPQ07021 282 aaKnown RBP12.98□□□□□ -0.33
CASP7-209ENST00000487232 RB1CC1Q8TDY2 1594 aa12.94□□□□□ -0.34
CASP7-209ENST00000487232 NPM3O75607 178 aaKnown RBP12.92□□□□□ -0.34
CASP7-209ENST00000487232 DNAJC5BQ9UF47 199 aa12.89□□□□□ -0.35
CASP7-209ENST00000487232 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.86□□□□□ -0.35
CASP7-209ENST00000487232 NACADO15069 1562 aa12.86□□□□□ -0.35
CASP7-209ENST00000487232 DCAF8L2P0C7V8 631 aa12.83□□□□□ -0.36
CASP7-209ENST00000487232 SLC4A1APQ9BWU0 796 aaKnown RBP12.78□□□□□ -0.36
CASP7-209ENST00000487232 MYO15BQ96JP2 1530 aa12.68□□□□□ -0.38
CASP7-209ENST00000487232 PABPN1Q86U42 306 aaKnown RBP eCLIP12.61□□□□□ -0.39
CASP7-209ENST00000487232 U3KPZ7 1027 aaPredicted RBP12.57□□□□□ -0.4
CASP7-209ENST00000487232 UNC13AQ9UPW8 1703 aa12.55□□□□□ -0.4
CASP7-209ENST00000487232 ZCCHC6Q5VYS8 1495 aaKnown RBP12.54□□□□□ -0.4
CASP7-209ENST00000487232 DCAF1Q9Y4B6 1507 aa12.52□□□□□ -0.4
CASP7-209ENST00000487232 BICRAQ9NZM4 1560 aa12.48□□□□□ -0.41
CASP7-209ENST00000487232 SPINK5Q9NQ38 1064 aaPredicted RBP12.47□□□□□ -0.41
CASP7-209ENST00000487232 CAPN15O75808 1086 aa12.44□□□□□ -0.42
CASP7-209ENST00000487232 SHROOM4Q9ULL8 1493 aa12.41□□□□□ -0.42
CASP7-209ENST00000487232 SLC4A2P04920 1241 aa12.38□□□□□ -0.43
CASP7-209ENST00000487232 SCRIBQ14160 1630 aa12.36□□□□□ -0.43
CASP7-209ENST00000487232 DSG3P32926 999 aa12.35□□□□□ -0.43
CASP7-209ENST00000487232 TRHP20396 242 aaPredicted RBP12.23□□□□□ -0.45
CASP7-209ENST00000487232 DAXXQ9UER7 740 aaPredicted RBP12.23□□□□□ -0.45
CASP7-209ENST00000487232 CC2D2AQ9P2K1 1620 aa12.22□□□□□ -0.45
CASP7-209ENST00000487232 CECR2Q9BXF3 1484 aa12.21□□□□□ -0.45
CASP7-209ENST00000487232 EIF4G1Q04637 1599 aaKnown RBP12.21□□□□□ -0.46
CASP7-209ENST00000487232 ABCB7O75027 752 aa12.19□□□□□ -0.46
CASP7-209ENST00000487232 ZBTB22O15209 634 aa12.12□□□□□ -0.47
CASP7-209ENST00000487232 ZNF219Q9P2Y4 722 aaPredicted RBP12.12□□□□□ -0.47
CASP7-209ENST00000487232 APLP2Q06481 763 aa12.11□□□□□ -0.47
CASP7-209ENST00000487232 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.08□□□□□ -0.48
CASP7-209ENST00000487232 PRKCSHP14314 528 aaPredicted RBP12.08□□□□□ -0.48
CASP7-209ENST00000487232 HNRNPUL2Q1KMD3 747 aaKnown RBP12.08□□□□□ -0.48
CASP7-209ENST00000487232 SAMD1Q6SPF0 538 aaPredicted RBP12.04□□□□□ -0.48
CASP7-209ENST00000487232 POTEHQ6S545 545 aa12.03□□□□□ -0.48
CASP7-209ENST00000487232 BCANQ96GW7 911 aa12□□□□□ -0.49
CASP7-209ENST00000487232 TAOK2Q9UL54 1235 aa11.95□□□□□ -0.5
CASP7-209ENST00000487232 MYCNP04198 464 aaPredicted RBP11.92□□□□□ -0.5
CASP7-209ENST00000487232 PLCB2Q00722 1185 aa11.89□□□□□ -0.51
CASP7-209ENST00000487232 ARXQ96QS3 562 aa11.88□□□□□ -0.51
CASP7-209ENST00000487232 NCAPD3P42695 1498 aa11.85□□□□□ -0.51
CASP7-209ENST00000487232 POLA2Q14181 598 aa11.83□□□□□ -0.52
CASP7-209ENST00000487232 SMARCA2P51531 1590 aa11.82□□□□□ -0.52
CASP7-209ENST00000487232 ATAD2BQ9ULI0 1458 aa11.8□□□□□ -0.52
CASP7-209ENST00000487232 SMARCA4P51532 1647 aa11.79□□□□□ -0.52
CASP7-209ENST00000487232 FKBP8Q14318 412 aa11.79□□□□□ -0.52
CASP7-209ENST00000487232 BAZ1AQ9NRL2 1556 aaPredicted RBP11.77□□□□□ -0.53
CASP7-209ENST00000487232 HMGXB3Q12766 1538 aa11.76□□□□□ -0.53
CASP7-209ENST00000487232 HAP1P54257 671 aaPredicted RBP11.76□□□□□ -0.53
CASP7-209ENST00000487232 FOXD4L1Q9NU39 408 aa11.75□□□□□ -0.53
CASP7-209ENST00000487232 RBM42Q9BTD8 480 aaKnown RBP11.74□□□□□ -0.53
CASP7-209ENST00000487232 ATF5Q9Y2D1 282 aaPredicted RBP11.74□□□□□ -0.53
CASP7-209ENST00000487232 ERCC6Q03468 1493 aa11.74□□□□□ -0.53
CASP7-209ENST00000487232 TPRNQ4KMQ1 711 aa11.73□□□□□ -0.53
CASP7-209ENST00000487232 BAZ1BQ9UIG0 1483 aaKnown RBP11.72□□□□□ -0.53
CASP7-209ENST00000487232 TIMELESSQ9UNS1 1208 aa11.71□□□□□ -0.53
CASP7-209ENST00000487232 CUX2O14529 1486 aa11.7□□□□□ -0.54
CASP7-209ENST00000487232 PEG3Q9GZU2 1588 aa11.67□□□□□ -0.54
CASP7-209ENST00000487232 MROH2BQ7Z745 1585 aa11.64□□□□□ -0.55
CASP7-209ENST00000487232 DNAJC5Q9H3Z4 198 aa11.64□□□□□ -0.55
CASP7-209ENST00000487232 TULP1O00294 542 aaPredicted RBP11.62□□□□□ -0.55
CASP7-209ENST00000487232 NESP48681 1621 aa11.61□□□□□ -0.55
CASP7-209ENST00000487232 CHRDL2Q6WN34 429 aa11.6□□□□□ -0.55
CASP7-209ENST00000487232 VSIG10Q8N0Z9 540 aa11.6□□□□□ -0.55
CASP7-209ENST00000487232 LAMC3Q9Y6N6 1575 aa11.58□□□□□ -0.55
CASP7-209ENST00000487232 PDS5BQ9NTI5 1447 aa11.55□□□□□ -0.56
CASP7-209ENST00000487232 ERICH6Q7L0X2 663 aa11.54□□□□□ -0.56
CASP7-209ENST00000487232 HOMEZQ8IX15 550 aa11.54□□□□□ -0.56
CASP7-209ENST00000487232 OSCARQ8IYS5 282 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms