RNA–Protein interactions for RNA: ENST00000486967.5

FAM228B-204, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-204ENST00000486967 AEBP2Q6ZN18 517 aaPredicted RBP23.4■■□□□ 1.34
FAM228B-204ENST00000486967 CHIC1Q5VXU3 224 aa22.29■■□□□ 1.16
FAM228B-204ENST00000486967 SENP3Q9H4L4 574 aaPredicted RBP20.09■□□□□ 0.81
FAM228B-204ENST00000486967 PHF23Q9BUL5 403 aaPredicted RBP19.77■□□□□ 0.76
FAM228B-204ENST00000486967 FOXD1Q16676 465 aa18.65■□□□□ 0.58
FAM228B-204ENST00000486967 PLPPR3Q6T4P5 718 aa17.87■□□□□ 0.45
FAM228B-204ENST00000486967 MSH5O43196 834 aa17.55■□□□□ 0.4
FAM228B-204ENST00000486967 PIAS4Q8N2W9 510 aaPredicted RBP17.49■□□□□ 0.39
FAM228B-204ENST00000486967 PPP6R1Q9UPN7 881 aa17.39■□□□□ 0.37
FAM228B-204ENST00000486967 ADRA2BP18089 450 aa17.37■□□□□ 0.37
FAM228B-204ENST00000486967 POTEDQ86YR6 584 aa17.05■□□□□ 0.32
FAM228B-204ENST00000486967 SCAF1Q9H7N4 1312 aaKnown RBP16.04■□□□□ 0.16
FAM228B-204ENST00000486967 MAPK8IP2Q13387 824 aaPredicted RBP15.93■□□□□ 0.14
FAM228B-204ENST00000486967 DMRT2Q9Y5R5 561 aa15.9■□□□□ 0.14
FAM228B-204ENST00000486967 PPP4R3CPQ6ZMV5 832 aa15.62■□□□□ 0.09
FAM228B-204ENST00000486967 CNKSR2Q8WXI2 1034 aa15.36■□□□□ 0.05
FAM228B-204ENST00000486967 DCAF8L1A6NGE4 600 aa15.31■□□□□ 0.04
FAM228B-204ENST00000486967 HOXD11P31277 338 aaPredicted RBP15.3■□□□□ 0.04
FAM228B-204ENST00000486967 RNF216Q9NWF9 866 aaPredicted RBP15.21■□□□□ 0.03
FAM228B-204ENST00000486967 NCBP3Q53F19 620 aaKnown RBP15.11■□□□□ 0.01
FAM228B-204ENST00000486967 DNAJC5BQ9UF47 199 aa15.11■□□□□ 0.01
FAM228B-204ENST00000486967 CACNB1Q02641 598 aaPredicted RBP15.05■□□□□ -0
FAM228B-204ENST00000486967 RNF39Q9H2S5 420 aa14.92□□□□□ -0.02
FAM228B-204ENST00000486967 DNAJC5Q9H3Z4 198 aa14.87□□□□□ -0.03
FAM228B-204ENST00000486967 ABCC9O60706 1549 aa14.84□□□□□ -0.03
FAM228B-204ENST00000486967 NPM3O75607 178 aaKnown RBP14.78□□□□□ -0.04
FAM228B-204ENST00000486967 C1QBPQ07021 282 aaKnown RBP14.74□□□□□ -0.05
FAM228B-204ENST00000486967 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.65□□□□□ -0.06
FAM228B-204ENST00000486967 KCNA4P22459 653 aa14.49□□□□□ -0.09
FAM228B-204ENST00000486967 NISCHQ9Y2I1 1504 aa14.47□□□□□ -0.09
FAM228B-204ENST00000486967 U3KPZ7 1027 aaPredicted RBP14.26□□□□□ -0.13
FAM228B-204ENST00000486967 CAPN15O75808 1086 aa14.1□□□□□ -0.15
FAM228B-204ENST00000486967 SLC4A2P04920 1241 aa14.08□□□□□ -0.16
FAM228B-204ENST00000486967 SPINK5Q9NQ38 1064 aaPredicted RBP14.04□□□□□ -0.16
FAM228B-204ENST00000486967 APLP2Q06481 763 aa14.02□□□□□ -0.17
FAM228B-204ENST00000486967 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.98□□□□□ -0.17
FAM228B-204ENST00000486967 HNRNPUL2Q1KMD3 747 aaKnown RBP13.98□□□□□ -0.17
FAM228B-204ENST00000486967 DSG3P32926 999 aa13.96□□□□□ -0.17
FAM228B-204ENST00000486967 SAMD1Q6SPF0 538 aaPredicted RBP13.87□□□□□ -0.19
FAM228B-204ENST00000486967 ZNF219Q9P2Y4 722 aaPredicted RBP13.87□□□□□ -0.19
FAM228B-204ENST00000486967 TRHP20396 242 aaPredicted RBP13.86□□□□□ -0.19
FAM228B-204ENST00000486967 SLC4A1APQ9BWU0 796 aaKnown RBP13.74□□□□□ -0.21
FAM228B-204ENST00000486967 ABCB7O75027 752 aa13.73□□□□□ -0.21
FAM228B-204ENST00000486967 MYCNP04198 464 aaPredicted RBP13.73□□□□□ -0.21
FAM228B-204ENST00000486967 TRIM41Q8WV44 630 aa13.62□□□□□ -0.23
FAM228B-204ENST00000486967 PABPN1Q86U42 306 aaKnown RBP eCLIP13.58□□□□□ -0.24
FAM228B-204ENST00000486967 CCDC180Q9P1Z9 1646 aa13.57□□□□□ -0.24
FAM228B-204ENST00000486967 FOXD4L1Q9NU39 408 aa13.57□□□□□ -0.24
FAM228B-204ENST00000486967 RB1CC1Q8TDY2 1594 aa13.56□□□□□ -0.24
FAM228B-204ENST00000486967 CECR2Q9BXF3 1484 aa13.52□□□□□ -0.25
FAM228B-204ENST00000486967 POLA2Q14181 598 aa13.48□□□□□ -0.25
FAM228B-204ENST00000486967 RBM42Q9BTD8 480 aaKnown RBP13.42□□□□□ -0.26
FAM228B-204ENST00000486967 POTEHQ6S545 545 aa13.39□□□□□ -0.27
FAM228B-204ENST00000486967 CUX2O14529 1486 aa13.37□□□□□ -0.27
FAM228B-204ENST00000486967 CC2D2AQ9P2K1 1620 aa13.35□□□□□ -0.27
FAM228B-204ENST00000486967 ATF5Q9Y2D1 282 aaPredicted RBP13.31□□□□□ -0.28
FAM228B-204ENST00000486967 ZBTB12Q9Y330 459 aaPredicted RBP13.29□□□□□ -0.28
FAM228B-204ENST00000486967 ZBTB22O15209 634 aa13.27□□□□□ -0.29
FAM228B-204ENST00000486967 UNC13AQ9UPW8 1703 aa13.23□□□□□ -0.29
FAM228B-204ENST00000486967 BICRAQ9NZM4 1560 aa13.21□□□□□ -0.29
FAM228B-204ENST00000486967 ATXN8OSP0DMR3 200 aa13.18□□□□□ -0.3
FAM228B-204ENST00000486967 NACADO15069 1562 aa13.15□□□□□ -0.3
FAM228B-204ENST00000486967 CHRDL2Q6WN34 429 aa13.07□□□□□ -0.32
FAM228B-204ENST00000486967 AKT1S1Q96B36 256 aa13.06□□□□□ -0.32
FAM228B-204ENST00000486967 OSCARQ8IYS5 282 aa13.03□□□□□ -0.32
FAM228B-204ENST00000486967 EIF4G1Q04637 1599 aaKnown RBP12.99□□□□□ -0.33
FAM228B-204ENST00000486967 ILDR1Q86SU0 546 aaPredicted RBP12.96□□□□□ -0.33
FAM228B-204ENST00000486967 FBLN2P98095 1184 aa12.95□□□□□ -0.34
FAM228B-204ENST00000486967 SHROOM4Q9ULL8 1493 aa12.94□□□□□ -0.34
FAM228B-204ENST00000486967 ERCC6Q03468 1493 aa12.91□□□□□ -0.34
FAM228B-204ENST00000486967 REM2Q8IYK8 340 aaPredicted RBP12.91□□□□□ -0.34
FAM228B-204ENST00000486967 SPDYE2BA6NHP3 402 aa12.82□□□□□ -0.36
FAM228B-204ENST00000486967 SPDYE6P0CI01 402 aa12.82□□□□□ -0.36
FAM228B-204ENST00000486967 SPDYE2Q495Y8 402 aa12.82□□□□□ -0.36
FAM228B-204ENST00000486967 PITPNM1O00562 1244 aa12.76□□□□□ -0.37
FAM228B-204ENST00000486967 DCAF8L2P0C7V8 631 aa12.73□□□□□ -0.37
FAM228B-204ENST00000486967 PIP4P2Q8N4L2 257 aa12.73□□□□□ -0.37
FAM228B-204ENST00000486967 MKRN4PQ13434 485 aaPredicted RBP12.71□□□□□ -0.37
FAM228B-204ENST00000486967 CSRNP3Q8WYN3 585 aa12.68□□□□□ -0.38
FAM228B-204ENST00000486967 ZNF692Q9BU19 519 aaPredicted RBP12.67□□□□□ -0.38
FAM228B-204ENST00000486967 FXR2P51116 673 aaKnown RBP eCLIP12.64□□□□□ -0.39
FAM228B-204ENST00000486967 SPDYE1Q8NFV5 336 aaPredicted RBP12.61□□□□□ -0.39
FAM228B-204ENST00000486967 SSUH2Q9Y2M2 353 aa12.6□□□□□ -0.39
FAM228B-204ENST00000486967 CLEC11AQ9Y240 323 aa12.59□□□□□ -0.39
FAM228B-204ENST00000486967 EHMT2Q96KQ7 1210 aa12.58□□□□□ -0.4
FAM228B-204ENST00000486967 HAX1O00165 279 aa12.56□□□□□ -0.4
FAM228B-204ENST00000486967 SP7Q8TDD2 431 aaPredicted RBP12.56□□□□□ -0.4
FAM228B-204ENST00000486967 MYO15BQ96JP2 1530 aa12.56□□□□□ -0.4
FAM228B-204ENST00000486967 THOC2Q8NI27 1593 aaKnown RBP12.53□□□□□ -0.4
FAM228B-204ENST00000486967 RIMBP3CA6NJZ7 1639 aa12.5□□□□□ -0.41
FAM228B-204ENST00000486967 RIMBP3BA6NNM3 1639 aa12.5□□□□□ -0.41
FAM228B-204ENST00000486967 RIMBP3Q9UFD9 1639 aa12.5□□□□□ -0.41
FAM228B-204ENST00000486967 PRKAR2AP13861 404 aaKnown RBP12.46□□□□□ -0.41
FAM228B-204ENST00000486967 BAZ1AQ9NRL2 1556 aaPredicted RBP12.46□□□□□ -0.42
FAM228B-204ENST00000486967 PRR29P0C7W0 189 aa12.39□□□□□ -0.43
FAM228B-204ENST00000486967 NESP48681 1621 aa12.37□□□□□ -0.43
FAM228B-204ENST00000486967 SCRIBQ14160 1630 aa12.33□□□□□ -0.43
FAM228B-204ENST00000486967 ARHGEF11O15085 1522 aa12.33□□□□□ -0.44
FAM228B-204ENST00000486967 CYB5RLQ6IPT4 315 aa12.3□□□□□ -0.44
FAM228B-204ENST00000486967 SMARCA2P51531 1590 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 177.6 ms