RNA–Protein interactions for RNA: ENST00000485886.1

MVB12B-204, Transcript of multivesicular body subunit 12B, humanhuman

TSL 2

Gene MVB12B, Length 4,537 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MVB12B-204ENST00000485886 DCAF8L2P0C7V8 631 aa23.02■■□□□ 1.28
MVB12B-204ENST00000485886 NISCHQ9Y2I1 1504 aa22.62■■□□□ 1.21
MVB12B-204ENST00000485886 SUPT5HO00267 1087 aaKnown RBP22.05■■□□□ 1.12
MVB12B-204ENST00000485886 SHROOM4Q9ULL8 1493 aa21.78■■□□□ 1.08
MVB12B-204ENST00000485886 EHMT2Q96KQ7 1210 aa21.21■□□□□ 0.99
MVB12B-204ENST00000485886 FAM9AQ8IZU1 332 aaPredicted RBP20.76■□□□□ 0.91
MVB12B-204ENST00000485886 PCGF6Q9BYE7 350 aa20.54■□□□□ 0.88
MVB12B-204ENST00000485886 TTBK1Q5TCY1 1321 aaPredicted RBP20.46■□□□□ 0.87
MVB12B-204ENST00000485886 APLP2Q06481 763 aa20.44■□□□□ 0.86
MVB12B-204ENST00000485886 TRIM41Q8WV44 630 aa20.35■□□□□ 0.85
MVB12B-204ENST00000485886 RANGAP1P46060 587 aaPredicted RBP20.23■□□□□ 0.83
MVB12B-204ENST00000485886 UBTFP17480 764 aaKnown RBP20.01■□□□□ 0.79
MVB12B-204ENST00000485886 CCER1Q8TC90 406 aaPredicted RBP19.97■□□□□ 0.79
MVB12B-204ENST00000485886 PPARGC1BQ86YN6 1023 aaKnown RBP19.91■□□□□ 0.78
MVB12B-204ENST00000485886 ATP1B4Q9UN42 357 aaPredicted RBP19.88■□□□□ 0.77
MVB12B-204ENST00000485886 ZEB1P37275 1124 aaPredicted RBP19.86■□□□□ 0.77
MVB12B-204ENST00000485886 PELP1Q8IZL8 1130 aaKnown RBP19.86■□□□□ 0.77
MVB12B-204ENST00000485886 CHIC1Q5VXU3 224 aa19.82■□□□□ 0.76
MVB12B-204ENST00000485886 LOC105371045A0A1W2PR82 267 aa19.8■□□□□ 0.76
MVB12B-204ENST00000485886 CENPBP07199 599 aaPredicted RBP19.64■□□□□ 0.74
MVB12B-204ENST00000485886 TRIM26Q12899 539 aaPredicted RBP19.64■□□□□ 0.73
MVB12B-204ENST00000485886 HRCP23327 699 aa19.51■□□□□ 0.71
MVB12B-204ENST00000485886 YTHDC1Q96MU7 727 aaKnown RBP19.47■□□□□ 0.71
MVB12B-204ENST00000485886 ITGAEP38570 1179 aa19.38■□□□□ 0.69
MVB12B-204ENST00000485886 ABCC9O60706 1549 aa19.36■□□□□ 0.69
MVB12B-204ENST00000485886 HNRNPUL2Q1KMD3 747 aaKnown RBP19.33■□□□□ 0.69
MVB12B-204ENST00000485886 PABPN1Q86U42 306 aaKnown RBP eCLIP19.3■□□□□ 0.68
MVB12B-204ENST00000485886 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.18■□□□□ 0.66
MVB12B-204ENST00000485886 NEFLP07196 543 aa19.13■□□□□ 0.65
MVB12B-204ENST00000485886 ERICH6Q7L0X2 663 aa19.08■□□□□ 0.64
MVB12B-204ENST00000485886 POLR3GLQ9BT43 218 aa18.97■□□□□ 0.63
MVB12B-204ENST00000485886 CNGB1Q14028 1251 aaPredicted RBP18.91■□□□□ 0.62
MVB12B-204ENST00000485886 MYT1LQ9UL68 1186 aa18.9■□□□□ 0.62
MVB12B-204ENST00000485886 DIEXFQ68CQ4 756 aaKnown RBP18.88■□□□□ 0.61
MVB12B-204ENST00000485886 FAM50AQ14320 339 aaKnown RBP18.86■□□□□ 0.61
MVB12B-204ENST00000485886 CSRNP3Q8WYN3 585 aa18.75■□□□□ 0.59
MVB12B-204ENST00000485886 ZCCHC6Q5VYS8 1495 aaKnown RBP18.74■□□□□ 0.59
MVB12B-204ENST00000485886 NEUROD1Q13562 356 aa18.71■□□□□ 0.59
MVB12B-204ENST00000485886 TRIM52Q96A61 297 aa18.66■□□□□ 0.58
MVB12B-204ENST00000485886 P3H3Q8IVL6 736 aa18.63■□□□□ 0.57
MVB12B-204ENST00000485886 SCRIBQ14160 1630 aa18.61■□□□□ 0.57
MVB12B-204ENST00000485886 FBLN2P98095 1184 aa18.55■□□□□ 0.56
MVB12B-204ENST00000485886 ARID3CA6NKF2 412 aa18.51■□□□□ 0.55
MVB12B-204ENST00000485886 ZNF316A6NFI3 1004 aaPredicted RBP18.49■□□□□ 0.55
MVB12B-204ENST00000485886 SLC4A1APQ9BWU0 796 aaKnown RBP18.47■□□□□ 0.55
MVB12B-204ENST00000485886 ZNF326Q5BKZ1 582 aaKnown RBP18.46■□□□□ 0.55
MVB12B-204ENST00000485886 GTF3C3Q9Y5Q9 886 aa18.46■□□□□ 0.55
MVB12B-204ENST00000485886 MYT1Q01538 1121 aa18.38■□□□□ 0.53
MVB12B-204ENST00000485886 BCANQ96GW7 911 aa18.38■□□□□ 0.53
MVB12B-204ENST00000485886 DAXXQ9UER7 740 aaPredicted RBP18.37■□□□□ 0.53
MVB12B-204ENST00000485886 ANP32CO43423 234 aa18.36■□□□□ 0.53
MVB12B-204ENST00000485886 DCAF1Q9Y4B6 1507 aa18.33■□□□□ 0.53
MVB12B-204ENST00000485886 CCDC180Q9P1Z9 1646 aa18.32■□□□□ 0.52
MVB12B-204ENST00000485886 ZNF777Q9ULD5 760 aaPredicted RBP18.26■□□□□ 0.51
MVB12B-204ENST00000485886 MYO15BQ96JP2 1530 aa18.25■□□□□ 0.51
MVB12B-204ENST00000485886 ACIN1Q9UKV3 1341 aaKnown RBP18.23■□□□□ 0.51
MVB12B-204ENST00000485886 RSF1Q96T23 1441 aaPredicted RBP18.23■□□□□ 0.51
MVB12B-204ENST00000485886 CLSPNQ9HAW4 1339 aa18.19■□□□□ 0.5
MVB12B-204ENST00000485886 CDK11AQ9UQ88 783 aaPredicted RBP18.14■□□□□ 0.49
MVB12B-204ENST00000485886 CHIC2Q9UKJ5 165 aa18.08■□□□□ 0.49
MVB12B-204ENST00000485886 DDX10Q13206 875 aaKnown RBP18.08■□□□□ 0.48
MVB12B-204ENST00000485886 TONSLQ96HA7 1378 aa18.06■□□□□ 0.48
MVB12B-204ENST00000485886 CLIP1P30622 1438 aa18.05■□□□□ 0.48
MVB12B-204ENST00000485886 RTL5Q5HYW3 569 aaPredicted RBP18.02■□□□□ 0.47
MVB12B-204ENST00000485886 RB1CC1Q8TDY2 1594 aa17.98■□□□□ 0.47
MVB12B-204ENST00000485886 CEP162Q5TB80 1403 aa17.96■□□□□ 0.47
MVB12B-204ENST00000485886 HIRIP3Q9BW71 556 aaPredicted RBP17.93■□□□□ 0.46
MVB12B-204ENST00000485886 MTUS2Q5JR59 1369 aa17.93■□□□□ 0.46
MVB12B-204ENST00000485886 WRNQ14191 1432 aaPredicted RBP eCLIP17.92■□□□□ 0.46
MVB12B-204ENST00000485886 HNRNPUQ00839 825 aaKnown RBP eCLIP17.91■□□□□ 0.46
MVB12B-204ENST00000485886 FKBP8Q14318 412 aa17.91■□□□□ 0.46
MVB12B-204ENST00000485886 MIER1Q8N108 512 aa17.91■□□□□ 0.46
MVB12B-204ENST00000485886 CECR2Q9BXF3 1484 aa17.91■□□□□ 0.46
MVB12B-204ENST00000485886 FAM9BQ8IZU0 186 aa17.89■□□□□ 0.45
MVB12B-204ENST00000485886 EEA1Q15075 1411 aa17.88■□□□□ 0.45
MVB12B-204ENST00000485886 NACADO15069 1562 aa17.88■□□□□ 0.45
MVB12B-204ENST00000485886 GOLGA3Q08378 1498 aa17.87■□□□□ 0.45
MVB12B-204ENST00000485886 CHGAP10645 457 aaKnown RBP17.86■□□□□ 0.45
MVB12B-204ENST00000485886 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.86■□□□□ 0.45
MVB12B-204ENST00000485886 BCL11AQ9H165 835 aa17.86■□□□□ 0.45
MVB12B-204ENST00000485886 CANXP27824 592 aaKnown RBP17.85■□□□□ 0.45
MVB12B-204ENST00000485886 CHMP7Q8WUX9 453 aaPredicted RBP17.83■□□□□ 0.45
MVB12B-204ENST00000485886 RRP7BPQ9NSQ0 103 aa17.83■□□□□ 0.45
MVB12B-204ENST00000485886 SALL2Q9Y467 1007 aaPredicted RBP17.82■□□□□ 0.44
MVB12B-204ENST00000485886 TSPY4P0CV99 314 aa17.81■□□□□ 0.44
MVB12B-204ENST00000485886 TSPY10P0CW01 314 aa17.81■□□□□ 0.44
MVB12B-204ENST00000485886 BAZ1BQ9UIG0 1483 aaKnown RBP17.81■□□□□ 0.44
MVB12B-204ENST00000485886 TNIKQ9UKE5 1360 aa17.81■□□□□ 0.44
MVB12B-204ENST00000485886 KDM2AQ9Y2K7 1162 aa17.8■□□□□ 0.44
MVB12B-204ENST00000485886 SLC24A1O60721 1099 aa17.76■□□□□ 0.43
MVB12B-204ENST00000485886 SCAF1Q9H7N4 1312 aaKnown RBP17.76■□□□□ 0.43
MVB12B-204ENST00000485886 NEFMP07197 916 aa17.75■□□□□ 0.43
MVB12B-204ENST00000485886 ZBTB47Q9UFB7 747 aaPredicted RBP17.74■□□□□ 0.43
MVB12B-204ENST00000485886 NPM1P06748 294 aaKnown RBP eCLIP17.74■□□□□ 0.43
MVB12B-204ENST00000485886 KIF27Q86VH2 1401 aa17.73■□□□□ 0.43
MVB12B-204ENST00000485886 TMC1Q8TDI8 760 aa17.73■□□□□ 0.43
MVB12B-204ENST00000485886 MRS2Q9HD23 443 aa17.72■□□□□ 0.43
MVB12B-204ENST00000485886 BAZ1AQ9NRL2 1556 aaPredicted RBP17.71■□□□□ 0.43
MVB12B-204ENST00000485886 CEP164Q9UPV0 1460 aa17.7■□□□□ 0.42
MVB12B-204ENST00000485886 NPM2Q86SE8 214 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 170.1 ms