RNA–Protein interactions for RNA: ENST00000482761.1

TMPRSS3-208, Transcript of transmembrane serine protease 3, humanhuman

TSL 1 (best)

Gene TMPRSS3, Length 2,524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS3-208ENST00000482761 NISCHQ9Y2I1 1504 aa28.09■■■□□ 2.09
TMPRSS3-208ENST00000482761 HRCP23327 699 aa25.41■■□□□ 1.66
TMPRSS3-208ENST00000482761 PELP1Q8IZL8 1130 aaKnown RBP25.19■■□□□ 1.62
TMPRSS3-208ENST00000482761 PPARGC1BQ86YN6 1023 aaKnown RBP24.59■■□□□ 1.53
TMPRSS3-208ENST00000482761 PCGF6Q9BYE7 350 aa24.52■■□□□ 1.52
TMPRSS3-208ENST00000482761 MYO15BQ96JP2 1530 aa24.41■■□□□ 1.5
TMPRSS3-208ENST00000482761 MYT1Q01538 1121 aa24.4■■□□□ 1.5
TMPRSS3-208ENST00000482761 DCAF1Q9Y4B6 1507 aa24.22■■□□□ 1.47
TMPRSS3-208ENST00000482761 SUPT5HO00267 1087 aaKnown RBP24.2■■□□□ 1.46
TMPRSS3-208ENST00000482761 CHIC1Q5VXU3 224 aa24.16■■□□□ 1.46
TMPRSS3-208ENST00000482761 SHROOM4Q9ULL8 1493 aa24.15■■□□□ 1.46
TMPRSS3-208ENST00000482761 SCAF1Q9H7N4 1312 aaKnown RBP24.12■■□□□ 1.45
TMPRSS3-208ENST00000482761 CCDC180Q9P1Z9 1646 aa24.1■■□□□ 1.45
TMPRSS3-208ENST00000482761 ZEB1P37275 1124 aaPredicted RBP23.9■■□□□ 1.42
TMPRSS3-208ENST00000482761 TRIM26Q12899 539 aaPredicted RBP23.85■■□□□ 1.41
TMPRSS3-208ENST00000482761 ZCCHC6Q5VYS8 1495 aaKnown RBP23.73■■□□□ 1.39
TMPRSS3-208ENST00000482761 ACIN1Q9UKV3 1341 aaKnown RBP23.51■■□□□ 1.35
TMPRSS3-208ENST00000482761 LOC105371045A0A1W2PR82 267 aa23.43■■□□□ 1.34
TMPRSS3-208ENST00000482761 NEUROD1Q13562 356 aa23.32■■□□□ 1.32
TMPRSS3-208ENST00000482761 GTF3C3Q9Y5Q9 886 aa23.22■■□□□ 1.31
TMPRSS3-208ENST00000482761 CENPBP07199 599 aaPredicted RBP23.2■■□□□ 1.3
TMPRSS3-208ENST00000482761 DCAF8L2P0C7V8 631 aa23.17■■□□□ 1.3
TMPRSS3-208ENST00000482761 TTBK1Q5TCY1 1321 aaPredicted RBP23.05■■□□□ 1.28
TMPRSS3-208ENST00000482761 DIEXFQ68CQ4 756 aaKnown RBP22.87■■□□□ 1.25
TMPRSS3-208ENST00000482761 CCER1Q8TC90 406 aaPredicted RBP22.64■■□□□ 1.21
TMPRSS3-208ENST00000482761 TRIM41Q8WV44 630 aa22.61■■□□□ 1.21
TMPRSS3-208ENST00000482761 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.6■■□□□ 1.21
TMPRSS3-208ENST00000482761 BCL11AQ9H165 835 aa22.48■■□□□ 1.19
TMPRSS3-208ENST00000482761 SCRIBQ14160 1630 aa22.44■■□□□ 1.18
TMPRSS3-208ENST00000482761 ZNF316A6NFI3 1004 aaPredicted RBP22.42■■□□□ 1.18
TMPRSS3-208ENST00000482761 ABCC9O60706 1549 aa22.41■■□□□ 1.18
TMPRSS3-208ENST00000482761 ANP32EQ9BTT0 268 aa22.37■■□□□ 1.17
TMPRSS3-208ENST00000482761 CLSPNQ9HAW4 1339 aa22.36■■□□□ 1.17
TMPRSS3-208ENST00000482761 YTHDC1Q96MU7 727 aaKnown RBP22.32■■□□□ 1.16
TMPRSS3-208ENST00000482761 FAM9AQ8IZU1 332 aaPredicted RBP22.3■■□□□ 1.16
TMPRSS3-208ENST00000482761 NACADO15069 1562 aa22.29■■□□□ 1.16
TMPRSS3-208ENST00000482761 MIER1Q8N108 512 aa22.21■■□□□ 1.15
TMPRSS3-208ENST00000482761 RB1CC1Q8TDY2 1594 aa22.16■■□□□ 1.14
TMPRSS3-208ENST00000482761 RSF1Q96T23 1441 aaPredicted RBP22.16■■□□□ 1.14
TMPRSS3-208ENST00000482761 WRNQ14191 1432 aaPredicted RBP eCLIP22.12■■□□□ 1.13
TMPRSS3-208ENST00000482761 TSHZ2Q9NRE2 1034 aa22.1■■□□□ 1.13
TMPRSS3-208ENST00000482761 SUPT16HQ9Y5B9 1047 aaKnown RBP22.1■■□□□ 1.13
TMPRSS3-208ENST00000482761 EHMT2Q96KQ7 1210 aa22.04■■□□□ 1.12
TMPRSS3-208ENST00000482761 CSRNP3Q8WYN3 585 aa22.01■■□□□ 1.11
TMPRSS3-208ENST00000482761 CECR2Q9BXF3 1484 aa21.89■■□□□ 1.09
TMPRSS3-208ENST00000482761 MROH2BQ7Z745 1585 aa21.8■■□□□ 1.08
TMPRSS3-208ENST00000482761 PRKCSHP14314 528 aaPredicted RBP21.78■■□□□ 1.08
TMPRSS3-208ENST00000482761 CEP162Q5TB80 1403 aa21.75■■□□□ 1.07
TMPRSS3-208ENST00000482761 UNC13AQ9UPW8 1703 aa21.69■■□□□ 1.06
TMPRSS3-208ENST00000482761 WIZO95785 1651 aa21.69■■□□□ 1.06
TMPRSS3-208ENST00000482761 TNIKQ9UKE5 1360 aa21.66■■□□□ 1.06
TMPRSS3-208ENST00000482761 EIF4G1Q04637 1599 aaKnown RBP21.65■■□□□ 1.06
TMPRSS3-208ENST00000482761 BAZ1AQ9NRL2 1556 aaPredicted RBP21.61■■□□□ 1.05
TMPRSS3-208ENST00000482761 RBM19Q9Y4C8 960 aaKnown RBP21.54■■□□□ 1.04
TMPRSS3-208ENST00000482761 ERICH6Q7L0X2 663 aa21.52■■□□□ 1.03
TMPRSS3-208ENST00000482761 SMARCA4P51532 1647 aa21.47■■□□□ 1.03
TMPRSS3-208ENST00000482761 HNRNPUL2Q1KMD3 747 aaKnown RBP21.45■■□□□ 1.02
TMPRSS3-208ENST00000482761 EEA1Q15075 1411 aa21.44■■□□□ 1.02
TMPRSS3-208ENST00000482761 BICRAQ9NZM4 1560 aa21.4■■□□□ 1.02
TMPRSS3-208ENST00000482761 MYT1LQ9UL68 1186 aa21.39■■□□□ 1.01
TMPRSS3-208ENST00000482761 TOP2AP11388 1531 aaKnown RBP21.37■■□□□ 1.01
TMPRSS3-208ENST00000482761 CCDC88BA6NC98 1476 aa21.37■■□□□ 1.01
TMPRSS3-208ENST00000482761 FKBP8Q14318 412 aa21.37■■□□□ 1.01
TMPRSS3-208ENST00000482761 BCANQ96GW7 911 aa21.36■■□□□ 1.01
TMPRSS3-208ENST00000482761 ABCC8Q09428 1581 aa21.36■■□□□ 1.01
TMPRSS3-208ENST00000482761 MSH5O43196 834 aa21.35■■□□□ 1.01
TMPRSS3-208ENST00000482761 GOLGA3Q08378 1498 aa21.33■■□□□ 1.01
TMPRSS3-208ENST00000482761 FANCIQ9NVI1 1328 aa21.32■■□□□ 1
TMPRSS3-208ENST00000482761 PABPN1Q86U42 306 aaKnown RBP eCLIP21.31■■□□□ 1
TMPRSS3-208ENST00000482761 DHX57Q6P158 1386 aaKnown RBP21.3■■□□□ 1
TMPRSS3-208ENST00000482761 SOGA1O94964 1423 aa21.28■■□□□ 1
TMPRSS3-208ENST00000482761 NEFLP07196 543 aa21.26■□□□□ 0.99
TMPRSS3-208ENST00000482761 SMARCA2P51531 1590 aa21.24■□□□□ 0.99
TMPRSS3-208ENST00000482761 UBTFP17480 764 aaKnown RBP21.24■□□□□ 0.99
TMPRSS3-208ENST00000482761 APLP2Q06481 763 aa21.21■□□□□ 0.99
TMPRSS3-208ENST00000482761 VPS8Q8N3P4 1428 aa21.19■□□□□ 0.98
TMPRSS3-208ENST00000482761 KCNH8Q96L42 1107 aa21.17■□□□□ 0.98
TMPRSS3-208ENST00000482761 CLIP1P30622 1438 aa21.13■□□□□ 0.97
TMPRSS3-208ENST00000482761 KIF21BO75037 1637 aa21.13■□□□□ 0.97
TMPRSS3-208ENST00000482761 RUSC2Q8N2Y8 1516 aa21.12■□□□□ 0.97
TMPRSS3-208ENST00000482761 PEG3Q9GZU2 1588 aa21.11■□□□□ 0.97
TMPRSS3-208ENST00000482761 DEKP35659 375 aaKnown RBP21.09■□□□□ 0.97
TMPRSS3-208ENST00000482761 CEP164Q9UPV0 1460 aa21.09■□□□□ 0.97
TMPRSS3-208ENST00000482761 ITGAEP38570 1179 aa21.06■□□□□ 0.96
TMPRSS3-208ENST00000482761 CUX2O14529 1486 aa21.03■□□□□ 0.96
TMPRSS3-208ENST00000482761 ERICH6BQ5W0A0 696 aa21.02■□□□□ 0.96
TMPRSS3-208ENST00000482761 CDK11AQ9UQ88 783 aaPredicted RBP21.01■□□□□ 0.95
TMPRSS3-208ENST00000482761 BAZ1BQ9UIG0 1483 aaKnown RBP21■□□□□ 0.95
TMPRSS3-208ENST00000482761 CCER2I3L3R5 266 aa20.99■□□□□ 0.95
TMPRSS3-208ENST00000482761 ANO8Q9HCE9 1232 aaPredicted RBP20.96■□□□□ 0.95
TMPRSS3-208ENST00000482761 ATAD2BQ9ULI0 1458 aa20.95■□□□□ 0.94
TMPRSS3-208ENST00000482761 RRBP1Q9P2E9 1410 aaKnown RBP20.89■□□□□ 0.93
TMPRSS3-208ENST00000482761 PPP1R15AO75807 674 aaPredicted RBP20.87■□□□□ 0.93
TMPRSS3-208ENST00000482761 DDX10Q13206 875 aaKnown RBP20.84■□□□□ 0.93
TMPRSS3-208ENST00000482761 TRIM52Q96A61 297 aa20.84■□□□□ 0.93
TMPRSS3-208ENST00000482761 MAPKBP1O60336 1514 aa20.82■□□□□ 0.92
TMPRSS3-208ENST00000482761 ANP32CO43423 234 aa20.77■□□□□ 0.92
TMPRSS3-208ENST00000482761 WDR97A6NE52 1622 aa20.76■□□□□ 0.91
TMPRSS3-208ENST00000482761 SALL2Q9Y467 1007 aaPredicted RBP20.76■□□□□ 0.91
TMPRSS3-208ENST00000482761 NOP58Q9Y2X3 529 aaKnown RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms