RNA–Protein interactions for RNA: ENST00000482556.5

PREX1-202, Transcript of phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1, humanhuman

TSL 2

Gene PREX1, Length 4,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREX1-202ENST00000482556 NISCHQ9Y2I1 1504 aa22.25■■□□□ 1.15
PREX1-202ENST00000482556 DCAF8L2P0C7V8 631 aa21.47■■□□□ 1.03
PREX1-202ENST00000482556 SUPT5HO00267 1087 aaKnown RBP20.7■□□□□ 0.9
PREX1-202ENST00000482556 SHROOM4Q9ULL8 1493 aa20.62■□□□□ 0.89
PREX1-202ENST00000482556 PCGF6Q9BYE7 350 aa19.66■□□□□ 0.74
PREX1-202ENST00000482556 EHMT2Q96KQ7 1210 aa19.58■□□□□ 0.72
PREX1-202ENST00000482556 APLP2Q06481 763 aa19.42■□□□□ 0.7
PREX1-202ENST00000482556 FAM9AQ8IZU1 332 aaPredicted RBP19.36■□□□□ 0.69
PREX1-202ENST00000482556 CHIC1Q5VXU3 224 aa19.27■□□□□ 0.67
PREX1-202ENST00000482556 HRCP23327 699 aa19.19■□□□□ 0.66
PREX1-202ENST00000482556 TRIM41Q8WV44 630 aa19.13■□□□□ 0.65
PREX1-202ENST00000482556 LOC105371045A0A1W2PR82 267 aa19.07■□□□□ 0.64
PREX1-202ENST00000482556 PELP1Q8IZL8 1130 aaKnown RBP19.03■□□□□ 0.64
PREX1-202ENST00000482556 TTBK1Q5TCY1 1321 aaPredicted RBP18.95■□□□□ 0.62
PREX1-202ENST00000482556 ZEB1P37275 1124 aaPredicted RBP18.94■□□□□ 0.62
PREX1-202ENST00000482556 TRIM26Q12899 539 aaPredicted RBP18.92■□□□□ 0.62
PREX1-202ENST00000482556 PPARGC1BQ86YN6 1023 aaKnown RBP18.91■□□□□ 0.62
PREX1-202ENST00000482556 CCER1Q8TC90 406 aaPredicted RBP18.77■□□□□ 0.6
PREX1-202ENST00000482556 UBTFP17480 764 aaKnown RBP18.76■□□□□ 0.59
PREX1-202ENST00000482556 RANGAP1P46060 587 aaPredicted RBP18.65■□□□□ 0.58
PREX1-202ENST00000482556 ZCCHC6Q5VYS8 1495 aaKnown RBP18.63■□□□□ 0.57
PREX1-202ENST00000482556 ATP1B4Q9UN42 357 aaPredicted RBP18.58■□□□□ 0.57
PREX1-202ENST00000482556 CENPBP07199 599 aaPredicted RBP18.53■□□□□ 0.56
PREX1-202ENST00000482556 ABCC9O60706 1549 aa18.44■□□□□ 0.54
PREX1-202ENST00000482556 MYO15BQ96JP2 1530 aa18.42■□□□□ 0.54
PREX1-202ENST00000482556 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.34■□□□□ 0.53
PREX1-202ENST00000482556 YTHDC1Q96MU7 727 aaKnown RBP18.32■□□□□ 0.52
PREX1-202ENST00000482556 CCDC180Q9P1Z9 1646 aa18.27■□□□□ 0.52
PREX1-202ENST00000482556 DCAF1Q9Y4B6 1507 aa18.26■□□□□ 0.51
PREX1-202ENST00000482556 PABPN1Q86U42 306 aaKnown RBP eCLIP18.21■□□□□ 0.51
PREX1-202ENST00000482556 HNRNPUL2Q1KMD3 747 aaKnown RBP18.15■□□□□ 0.5
PREX1-202ENST00000482556 DIEXFQ68CQ4 756 aaKnown RBP18.11■□□□□ 0.49
PREX1-202ENST00000482556 NEFLP07196 543 aa18.09■□□□□ 0.49
PREX1-202ENST00000482556 SCRIBQ14160 1630 aa18.05■□□□□ 0.48
PREX1-202ENST00000482556 ERICH6Q7L0X2 663 aa18■□□□□ 0.47
PREX1-202ENST00000482556 ITGAEP38570 1179 aa17.95■□□□□ 0.46
PREX1-202ENST00000482556 RSF1Q96T23 1441 aaPredicted RBP17.89■□□□□ 0.45
PREX1-202ENST00000482556 GTF3C3Q9Y5Q9 886 aa17.88■□□□□ 0.45
PREX1-202ENST00000482556 MYT1LQ9UL68 1186 aa17.87■□□□□ 0.45
PREX1-202ENST00000482556 CSRNP3Q8WYN3 585 aa17.82■□□□□ 0.44
PREX1-202ENST00000482556 ACIN1Q9UKV3 1341 aaKnown RBP17.81■□□□□ 0.44
PREX1-202ENST00000482556 ZNF316A6NFI3 1004 aaPredicted RBP17.77■□□□□ 0.44
PREX1-202ENST00000482556 MYT1Q01538 1121 aa17.75■□□□□ 0.43
PREX1-202ENST00000482556 SCAF1Q9H7N4 1312 aaKnown RBP17.7■□□□□ 0.42
PREX1-202ENST00000482556 POLR3GLQ9BT43 218 aa17.66■□□□□ 0.42
PREX1-202ENST00000482556 FAM50AQ14320 339 aaKnown RBP17.65■□□□□ 0.42
PREX1-202ENST00000482556 NEUROD1Q13562 356 aa17.64■□□□□ 0.41
PREX1-202ENST00000482556 RB1CC1Q8TDY2 1594 aa17.54■□□□□ 0.4
PREX1-202ENST00000482556 CECR2Q9BXF3 1484 aa17.53■□□□□ 0.4
PREX1-202ENST00000482556 TRIM52Q96A61 297 aa17.53■□□□□ 0.4
PREX1-202ENST00000482556 CEP162Q5TB80 1403 aa17.46■□□□□ 0.39
PREX1-202ENST00000482556 DAXXQ9UER7 740 aaPredicted RBP17.43■□□□□ 0.38
PREX1-202ENST00000482556 FBLN2P98095 1184 aa17.42■□□□□ 0.38
PREX1-202ENST00000482556 NACADO15069 1562 aa17.39■□□□□ 0.37
PREX1-202ENST00000482556 MIER1Q8N108 512 aa17.39■□□□□ 0.37
PREX1-202ENST00000482556 BCANQ96GW7 911 aa17.38■□□□□ 0.37
PREX1-202ENST00000482556 CDK11AQ9UQ88 783 aaPredicted RBP17.37■□□□□ 0.37
PREX1-202ENST00000482556 MROH2BQ7Z745 1585 aa17.35■□□□□ 0.37
PREX1-202ENST00000482556 SLC4A1APQ9BWU0 796 aaKnown RBP17.34■□□□□ 0.37
PREX1-202ENST00000482556 CNGB1Q14028 1251 aaPredicted RBP17.34■□□□□ 0.37
PREX1-202ENST00000482556 CLIP1P30622 1438 aa17.34■□□□□ 0.37
PREX1-202ENST00000482556 TNIKQ9UKE5 1360 aa17.33■□□□□ 0.36
PREX1-202ENST00000482556 P3H3Q8IVL6 736 aa17.32■□□□□ 0.36
PREX1-202ENST00000482556 EEA1Q15075 1411 aa17.3■□□□□ 0.36
PREX1-202ENST00000482556 GOLGA3Q08378 1498 aa17.29■□□□□ 0.36
PREX1-202ENST00000482556 ANP32CO43423 234 aa17.28■□□□□ 0.36
PREX1-202ENST00000482556 SOGA1O94964 1423 aa17.27■□□□□ 0.35
PREX1-202ENST00000482556 BAZ1AQ9NRL2 1556 aaPredicted RBP17.25■□□□□ 0.35
PREX1-202ENST00000482556 WRNQ14191 1432 aaPredicted RBP eCLIP17.25■□□□□ 0.35
PREX1-202ENST00000482556 ZNF326Q5BKZ1 582 aaKnown RBP17.19■□□□□ 0.34
PREX1-202ENST00000482556 ABCC8Q09428 1581 aa17.19■□□□□ 0.34
PREX1-202ENST00000482556 CCDC88BA6NC98 1476 aa17.18■□□□□ 0.34
PREX1-202ENST00000482556 WIZO95785 1651 aa17.16■□□□□ 0.34
PREX1-202ENST00000482556 DDX10Q13206 875 aaKnown RBP17.14■□□□□ 0.33
PREX1-202ENST00000482556 CEP164Q9UPV0 1460 aa17.13■□□□□ 0.33
PREX1-202ENST00000482556 CLSPNQ9HAW4 1339 aa17.12■□□□□ 0.33
PREX1-202ENST00000482556 ZNF777Q9ULD5 760 aaPredicted RBP17.1■□□□□ 0.33
PREX1-202ENST00000482556 ARID3CA6NKF2 412 aa17.09■□□□□ 0.33
PREX1-202ENST00000482556 FKBP8Q14318 412 aa17.07■□□□□ 0.32
PREX1-202ENST00000482556 TONSLQ96HA7 1378 aa17.02■□□□□ 0.32
PREX1-202ENST00000482556 BAZ1BQ9UIG0 1483 aaKnown RBP17.01■□□□□ 0.31
PREX1-202ENST00000482556 HIRIP3Q9BW71 556 aaPredicted RBP17.01■□□□□ 0.31
PREX1-202ENST00000482556 NPM1P06748 294 aaKnown RBP eCLIP17.01■□□□□ 0.31
PREX1-202ENST00000482556 RTL5Q5HYW3 569 aaPredicted RBP16.99■□□□□ 0.31
PREX1-202ENST00000482556 NEFMP07197 916 aa16.99■□□□□ 0.31
PREX1-202ENST00000482556 TOP2AP11388 1531 aaKnown RBP16.95■□□□□ 0.3
PREX1-202ENST00000482556 VPS8Q8N3P4 1428 aa16.94■□□□□ 0.3
PREX1-202ENST00000482556 ZBTB47Q9UFB7 747 aaPredicted RBP16.94■□□□□ 0.3
PREX1-202ENST00000482556 MTUS2Q5JR59 1369 aa16.94■□□□□ 0.3
PREX1-202ENST00000482556 RUSC2Q8N2Y8 1516 aa16.93■□□□□ 0.3
PREX1-202ENST00000482556 ESF1Q9H501 851 aaKnown RBP16.91■□□□□ 0.3
PREX1-202ENST00000482556 TSPY4P0CV99 314 aa16.91■□□□□ 0.3
PREX1-202ENST00000482556 TSPY10P0CW01 314 aa16.91■□□□□ 0.3
PREX1-202ENST00000482556 CHMP7Q8WUX9 453 aaPredicted RBP16.91■□□□□ 0.3
PREX1-202ENST00000482556 HNRNPUQ00839 825 aaKnown RBP eCLIP16.9■□□□□ 0.3
PREX1-202ENST00000482556 KIF27Q86VH2 1401 aa16.9■□□□□ 0.3
PREX1-202ENST00000482556 KANK4Q5T7N3 995 aaPredicted RBP16.88■□□□□ 0.29
PREX1-202ENST00000482556 CHIC2Q9UKJ5 165 aa16.87■□□□□ 0.29
PREX1-202ENST00000482556 SIN3AQ96ST3 1273 aa16.85■□□□□ 0.29
PREX1-202ENST00000482556 CANXP27824 592 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms