RNA–Protein interactions for RNA: ENST00000480406.6

RPP30-208, Transcript of ribonuclease P/MRP subunit p30, humanhuman

TSL 5

Gene RPP30, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP30-208ENST00000480406 AEBP2Q6ZN18 517 aaPredicted RBP18.95■□□□□ 0.62
RPP30-208ENST00000480406 CHIC1Q5VXU3 224 aa17.81■□□□□ 0.44
RPP30-208ENST00000480406 SENP3Q9H4L4 574 aaPredicted RBP16.26■□□□□ 0.19
RPP30-208ENST00000480406 PHF23Q9BUL5 403 aaPredicted RBP16■□□□□ 0.15
RPP30-208ENST00000480406 FOXD1Q16676 465 aa15.14■□□□□ 0.01
RPP30-208ENST00000480406 POTEDQ86YR6 584 aa14.33□□□□□ -0.12
RPP30-208ENST00000480406 MSH5O43196 834 aa14.32□□□□□ -0.12
RPP30-208ENST00000480406 PLPPR3Q6T4P5 718 aa14.14□□□□□ -0.15
RPP30-208ENST00000480406 PIAS4Q8N2W9 510 aaPredicted RBP14.11□□□□□ -0.15
RPP30-208ENST00000480406 PPP6R1Q9UPN7 881 aa13.96□□□□□ -0.17
RPP30-208ENST00000480406 NISCHQ9Y2I1 1504 aa13.94□□□□□ -0.18
RPP30-208ENST00000480406 ADRA2BP18089 450 aa13.91□□□□□ -0.18
RPP30-208ENST00000480406 MAPK8IP2Q13387 824 aaPredicted RBP12.85□□□□□ -0.35
RPP30-208ENST00000480406 DMRT2Q9Y5R5 561 aa12.84□□□□□ -0.35
RPP30-208ENST00000480406 SCAF1Q9H7N4 1312 aaKnown RBP12.8□□□□□ -0.36
RPP30-208ENST00000480406 CACNB1Q02641 598 aaPredicted RBP12.42□□□□□ -0.42
RPP30-208ENST00000480406 PPP4R3CPQ6ZMV5 832 aa12.35□□□□□ -0.43
RPP30-208ENST00000480406 DCAF8L1A6NGE4 600 aa12.33□□□□□ -0.44
RPP30-208ENST00000480406 HOXD11P31277 338 aaPredicted RBP12.28□□□□□ -0.44
RPP30-208ENST00000480406 CNKSR2Q8WXI2 1034 aa12.18□□□□□ -0.46
RPP30-208ENST00000480406 CCDC180Q9P1Z9 1646 aa12.18□□□□□ -0.46
RPP30-208ENST00000480406 RNF39Q9H2S5 420 aa12.16□□□□□ -0.46
RPP30-208ENST00000480406 RNF216Q9NWF9 866 aaPredicted RBP12.13□□□□□ -0.47
RPP30-208ENST00000480406 C1QBPQ07021 282 aaKnown RBP12□□□□□ -0.49
RPP30-208ENST00000480406 DNAJC5BQ9UF47 199 aa11.93□□□□□ -0.5
RPP30-208ENST00000480406 DCAF8L2P0C7V8 631 aa11.88□□□□□ -0.51
RPP30-208ENST00000480406 NCBP3Q53F19 620 aaKnown RBP11.84□□□□□ -0.51
RPP30-208ENST00000480406 ABCC9O60706 1549 aa11.75□□□□□ -0.53
RPP30-208ENST00000480406 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.72□□□□□ -0.53
RPP30-208ENST00000480406 ZCCHC6Q5VYS8 1495 aaKnown RBP11.63□□□□□ -0.55
RPP30-208ENST00000480406 NPM3O75607 178 aaKnown RBP11.61□□□□□ -0.55
RPP30-208ENST00000480406 DCAF1Q9Y4B6 1507 aa11.51□□□□□ -0.57
RPP30-208ENST00000480406 NACADO15069 1562 aa11.48□□□□□ -0.57
RPP30-208ENST00000480406 MYO15BQ96JP2 1530 aa11.45□□□□□ -0.58
RPP30-208ENST00000480406 RB1CC1Q8TDY2 1594 aa11.43□□□□□ -0.58
RPP30-208ENST00000480406 U3KPZ7 1027 aaPredicted RBP11.42□□□□□ -0.58
RPP30-208ENST00000480406 SHROOM4Q9ULL8 1493 aa11.37□□□□□ -0.59
RPP30-208ENST00000480406 CAPN15O75808 1086 aa11.33□□□□□ -0.6
RPP30-208ENST00000480406 SPINK5Q9NQ38 1064 aaPredicted RBP11.31□□□□□ -0.6
RPP30-208ENST00000480406 DSG3P32926 999 aa11.3□□□□□ -0.6
RPP30-208ENST00000480406 SCRIBQ14160 1630 aa11.21□□□□□ -0.61
RPP30-208ENST00000480406 POTEHQ6S545 545 aa11.19□□□□□ -0.62
RPP30-208ENST00000480406 KCNA4P22459 653 aa11.17□□□□□ -0.62
RPP30-208ENST00000480406 SLC4A2P04920 1241 aa11.14□□□□□ -0.63
RPP30-208ENST00000480406 APLP2Q06481 763 aa11.14□□□□□ -0.63
RPP30-208ENST00000480406 PABPN1Q86U42 306 aaKnown RBP eCLIP11.13□□□□□ -0.63
RPP30-208ENST00000480406 TRHP20396 242 aaPredicted RBP11.09□□□□□ -0.63
RPP30-208ENST00000480406 ZNF219Q9P2Y4 722 aaPredicted RBP11.08□□□□□ -0.64
RPP30-208ENST00000480406 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.06□□□□□ -0.64
RPP30-208ENST00000480406 HNRNPUL2Q1KMD3 747 aaKnown RBP11.06□□□□□ -0.64
RPP30-208ENST00000480406 ABCB7O75027 752 aa11.03□□□□□ -0.64
RPP30-208ENST00000480406 SAMD1Q6SPF0 538 aaPredicted RBP10.98□□□□□ -0.65
RPP30-208ENST00000480406 SUPT5HO00267 1087 aaKnown RBP10.97□□□□□ -0.65
RPP30-208ENST00000480406 UNC13AQ9UPW8 1703 aa10.95□□□□□ -0.66
RPP30-208ENST00000480406 BICRAQ9NZM4 1560 aa10.9□□□□□ -0.67
RPP30-208ENST00000480406 RBM42Q9BTD8 480 aaKnown RBP10.84□□□□□ -0.67
RPP30-208ENST00000480406 BAZ1AQ9NRL2 1556 aaPredicted RBP10.82□□□□□ -0.68
RPP30-208ENST00000480406 CECR2Q9BXF3 1484 aa10.8□□□□□ -0.68
RPP30-208ENST00000480406 MYCNP04198 464 aaPredicted RBP10.77□□□□□ -0.69
RPP30-208ENST00000480406 RSF1Q96T23 1441 aaPredicted RBP10.76□□□□□ -0.69
RPP30-208ENST00000480406 POLA2Q14181 598 aa10.73□□□□□ -0.69
RPP30-208ENST00000480406 SMARCA4P51532 1647 aa10.71□□□□□ -0.69
RPP30-208ENST00000480406 MROH2BQ7Z745 1585 aa10.71□□□□□ -0.69
RPP30-208ENST00000480406 EIF4G1Q04637 1599 aaKnown RBP10.69□□□□□ -0.7
RPP30-208ENST00000480406 SMARCA2P51531 1590 aa10.67□□□□□ -0.7
RPP30-208ENST00000480406 CHRDL2Q6WN34 429 aa10.66□□□□□ -0.7
RPP30-208ENST00000480406 BAZ1BQ9UIG0 1483 aaKnown RBP10.62□□□□□ -0.71
RPP30-208ENST00000480406 ATAD2BQ9ULI0 1458 aa10.62□□□□□ -0.71
RPP30-208ENST00000480406 WIZO95785 1651 aa10.6□□□□□ -0.71
RPP30-208ENST00000480406 NCAPD3P42695 1498 aa10.58□□□□□ -0.72
RPP30-208ENST00000480406 SLC4A1APQ9BWU0 796 aaKnown RBP10.57□□□□□ -0.72
RPP30-208ENST00000480406 CC2D2AQ9P2K1 1620 aa10.57□□□□□ -0.72
RPP30-208ENST00000480406 PEG3Q9GZU2 1588 aa10.56□□□□□ -0.72
RPP30-208ENST00000480406 TOP2AP11388 1531 aaKnown RBP10.54□□□□□ -0.72
RPP30-208ENST00000480406 FOXD4L1Q9NU39 408 aa10.54□□□□□ -0.72
RPP30-208ENST00000480406 ZBTB12Q9Y330 459 aaPredicted RBP10.54□□□□□ -0.72
RPP30-208ENST00000480406 AKT1S1Q96B36 256 aa10.53□□□□□ -0.72
RPP30-208ENST00000480406 HMGXB3Q12766 1538 aa10.51□□□□□ -0.73
RPP30-208ENST00000480406 ATF5Q9Y2D1 282 aaPredicted RBP10.49□□□□□ -0.73
RPP30-208ENST00000480406 CCDC88BA6NC98 1476 aa10.47□□□□□ -0.73
RPP30-208ENST00000480406 REM2Q8IYK8 340 aaPredicted RBP10.4□□□□□ -0.74
RPP30-208ENST00000480406 OSCARQ8IYS5 282 aa10.39□□□□□ -0.75
RPP30-208ENST00000480406 SP7Q8TDD2 431 aaPredicted RBP10.39□□□□□ -0.75
RPP30-208ENST00000480406 TRIM41Q8WV44 630 aa10.38□□□□□ -0.75
RPP30-208ENST00000480406 CADPSQ9ULU8 1353 aa10.36□□□□□ -0.75
RPP30-208ENST00000480406 PIP4P2Q8N4L2 257 aa10.35□□□□□ -0.75
RPP30-208ENST00000480406 PDS5BQ9NTI5 1447 aa10.3□□□□□ -0.76
RPP30-208ENST00000480406 PITPNM1O00562 1244 aa10.29□□□□□ -0.76
RPP30-208ENST00000480406 CFTRP13569 1480 aa10.29□□□□□ -0.76
RPP30-208ENST00000480406 FXR2P51116 673 aaKnown RBP eCLIP10.26□□□□□ -0.77
RPP30-208ENST00000480406 HAX1O00165 279 aa10.25□□□□□ -0.77
RPP30-208ENST00000480406 LAMC3Q9Y6N6 1575 aa10.25□□□□□ -0.77
RPP30-208ENST00000480406 ZBTB22O15209 634 aa10.24□□□□□ -0.77
RPP30-208ENST00000480406 ATXN8OSP0DMR3 200 aa10.24□□□□□ -0.77
RPP30-208ENST00000480406 ERCC6Q03468 1493 aa10.22□□□□□ -0.77
RPP30-208ENST00000480406 WRNQ14191 1432 aaPredicted RBP eCLIP10.21□□□□□ -0.78
RPP30-208ENST00000480406 FANCD2Q9BXW9 1451 aa10.21□□□□□ -0.78
RPP30-208ENST00000480406 NESP48681 1621 aa10.19□□□□□ -0.78
RPP30-208ENST00000480406 CEP164Q9UPV0 1460 aa10.18□□□□□ -0.78
RPP30-208ENST00000480406 SPDYE2BA6NHP3 402 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms