RNA–Protein interactions for RNA: ENST00000480008.1

PHF10-204, Transcript of PHD finger protein 10, humanhuman

TSL 1 (best)

Gene PHF10, Length 4,285 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF10-204ENST00000480008 NISCHQ9Y2I1 1504 aa33.66■■■□□ 2.98
PHF10-204ENST00000480008 SHROOM4Q9ULL8 1493 aa29■■■□□ 2.23
PHF10-204ENST00000480008 DCAF8L2P0C7V8 631 aa28.9■■■□□ 2.22
PHF10-204ENST00000480008 SUPT5HO00267 1087 aaKnown RBP28.78■■■□□ 2.2
PHF10-204ENST00000480008 CCDC180Q9P1Z9 1646 aa28.64■■■□□ 2.17
PHF10-204ENST00000480008 ZCCHC6Q5VYS8 1495 aaKnown RBP28.29■■■□□ 2.12
PHF10-204ENST00000480008 PCGF6Q9BYE7 350 aa27.93■■■□□ 2.06
PHF10-204ENST00000480008 PPARGC1BQ86YN6 1023 aaKnown RBP27.8■■■□□ 2.04
PHF10-204ENST00000480008 HRCP23327 699 aa27.74■■■□□ 2.03
PHF10-204ENST00000480008 CHIC1Q5VXU3 224 aa27.58■■■□□ 2.01
PHF10-204ENST00000480008 ABCC9O60706 1549 aa27.55■■■□□ 2
PHF10-204ENST00000480008 MYO15BQ96JP2 1530 aa27.51■■□□□ 1.99
PHF10-204ENST00000480008 DCAF1Q9Y4B6 1507 aa27.37■■□□□ 1.97
PHF10-204ENST00000480008 LOC105371045A0A1W2PR82 267 aa27.36■■□□□ 1.97
PHF10-204ENST00000480008 SCRIBQ14160 1630 aa27.15■■□□□ 1.94
PHF10-204ENST00000480008 EHMT2Q96KQ7 1210 aa27.14■■□□□ 1.93
PHF10-204ENST00000480008 FAM9AQ8IZU1 332 aaPredicted RBP26.83■■□□□ 1.89
PHF10-204ENST00000480008 NACADO15069 1562 aa26.75■■□□□ 1.87
PHF10-204ENST00000480008 TRIM26Q12899 539 aaPredicted RBP26.63■■□□□ 1.85
PHF10-204ENST00000480008 RSF1Q96T23 1441 aaPredicted RBP26.53■■□□□ 1.84
PHF10-204ENST00000480008 RB1CC1Q8TDY2 1594 aa26.52■■□□□ 1.84
PHF10-204ENST00000480008 CECR2Q9BXF3 1484 aa26.45■■□□□ 1.82
PHF10-204ENST00000480008 PABPN1Q86U42 306 aaKnown RBP eCLIP26.42■■□□□ 1.82
PHF10-204ENST00000480008 TRIM41Q8WV44 630 aa26.34■■□□□ 1.81
PHF10-204ENST00000480008 TTBK1Q5TCY1 1321 aaPredicted RBP26.3■■□□□ 1.8
PHF10-204ENST00000480008 MROH2BQ7Z745 1585 aa26.22■■□□□ 1.79
PHF10-204ENST00000480008 SCAF1Q9H7N4 1312 aaKnown RBP26.21■■□□□ 1.79
PHF10-204ENST00000480008 ZEB1P37275 1124 aaPredicted RBP26.06■■□□□ 1.76
PHF10-204ENST00000480008 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.05■■□□□ 1.76
PHF10-204ENST00000480008 WIZO95785 1651 aa26.04■■□□□ 1.76
PHF10-204ENST00000480008 CCER1Q8TC90 406 aaPredicted RBP25.92■■□□□ 1.74
PHF10-204ENST00000480008 UNC13AQ9UPW8 1703 aa25.92■■□□□ 1.74
PHF10-204ENST00000480008 BAZ1AQ9NRL2 1556 aaPredicted RBP25.91■■□□□ 1.74
PHF10-204ENST00000480008 PELP1Q8IZL8 1130 aaKnown RBP25.79■■□□□ 1.72
PHF10-204ENST00000480008 NEUROD1Q13562 356 aa25.74■■□□□ 1.71
PHF10-204ENST00000480008 SMARCA4P51532 1647 aa25.72■■□□□ 1.71
PHF10-204ENST00000480008 BICRAQ9NZM4 1560 aa25.7■■□□□ 1.7
PHF10-204ENST00000480008 YTHDC1Q96MU7 727 aaKnown RBP25.65■■□□□ 1.7
PHF10-204ENST00000480008 GTF3C3Q9Y5Q9 886 aa25.63■■□□□ 1.69
PHF10-204ENST00000480008 ACIN1Q9UKV3 1341 aaKnown RBP25.58■■□□□ 1.68
PHF10-204ENST00000480008 DIEXFQ68CQ4 756 aaKnown RBP25.55■■□□□ 1.68
PHF10-204ENST00000480008 CCDC88BA6NC98 1476 aa25.55■■□□□ 1.68
PHF10-204ENST00000480008 TOP2AP11388 1531 aaKnown RBP25.53■■□□□ 1.68
PHF10-204ENST00000480008 ABCC8Q09428 1581 aa25.39■■□□□ 1.65
PHF10-204ENST00000480008 SMARCA2P51531 1590 aa25.39■■□□□ 1.65
PHF10-204ENST00000480008 CENPBP07199 599 aaPredicted RBP25.39■■□□□ 1.65
PHF10-204ENST00000480008 RANGAP1P46060 587 aaPredicted RBP25.3■■□□□ 1.64
PHF10-204ENST00000480008 BAZ1BQ9UIG0 1483 aaKnown RBP25.29■■□□□ 1.64
PHF10-204ENST00000480008 ATAD2BQ9ULI0 1458 aa25.28■■□□□ 1.64
PHF10-204ENST00000480008 UBTFP17480 764 aaKnown RBP25.24■■□□□ 1.63
PHF10-204ENST00000480008 HNRNPUL2Q1KMD3 747 aaKnown RBP25.21■■□□□ 1.63
PHF10-204ENST00000480008 EIF4G1Q04637 1599 aaKnown RBP25.14■■□□□ 1.61
PHF10-204ENST00000480008 SOGA1O94964 1423 aa25.08■■□□□ 1.61
PHF10-204ENST00000480008 PEG3Q9GZU2 1588 aa25.04■■□□□ 1.6
PHF10-204ENST00000480008 WRNQ14191 1432 aaPredicted RBP eCLIP25.03■■□□□ 1.6
PHF10-204ENST00000480008 ZNF316A6NFI3 1004 aaPredicted RBP25■■□□□ 1.59
PHF10-204ENST00000480008 MIER1Q8N108 512 aa24.99■■□□□ 1.59
PHF10-204ENST00000480008 CSRNP3Q8WYN3 585 aa24.99■■□□□ 1.59
PHF10-204ENST00000480008 RUSC2Q8N2Y8 1516 aa24.97■■□□□ 1.59
PHF10-204ENST00000480008 CEP162Q5TB80 1403 aa24.81■■□□□ 1.56
PHF10-204ENST00000480008 NCAPD3P42695 1498 aa24.81■■□□□ 1.56
PHF10-204ENST00000480008 SYNJ1O43426 1573 aa24.78■■□□□ 1.56
PHF10-204ENST00000480008 APLP2Q06481 763 aa24.7■■□□□ 1.54
PHF10-204ENST00000480008 EEA1Q15075 1411 aa24.67■■□□□ 1.54
PHF10-204ENST00000480008 HMGXB3Q12766 1538 aa24.67■■□□□ 1.54
PHF10-204ENST00000480008 TNIKQ9UKE5 1360 aa24.61■■□□□ 1.53
PHF10-204ENST00000480008 GOLGA3Q08378 1498 aa24.59■■□□□ 1.53
PHF10-204ENST00000480008 ITGAEP38570 1179 aa24.56■■□□□ 1.52
PHF10-204ENST00000480008 CC2D2AQ9P2K1 1620 aa24.56■■□□□ 1.52
PHF10-204ENST00000480008 CEP164Q9UPV0 1460 aa24.49■■□□□ 1.51
PHF10-204ENST00000480008 CFTRP13569 1480 aa24.48■■□□□ 1.51
PHF10-204ENST00000480008 MYT1Q01538 1121 aa24.47■■□□□ 1.51
PHF10-204ENST00000480008 BCANQ96GW7 911 aa24.46■■□□□ 1.51
PHF10-204ENST00000480008 CADPSQ9ULU8 1353 aa24.45■■□□□ 1.51
PHF10-204ENST00000480008 RAPGEF2Q9Y4G8 1499 aa24.45■■□□□ 1.51
PHF10-204ENST00000480008 TOP2BQ02880 1626 aa24.44■■□□□ 1.5
PHF10-204ENST00000480008 CUX1P39880 1505 aa24.42■■□□□ 1.5
PHF10-204ENST00000480008 CLIP1P30622 1438 aa24.41■■□□□ 1.5
PHF10-204ENST00000480008 DNAJC5BQ9UF47 199 aa24.39■■□□□ 1.5
PHF10-204ENST00000480008 KIF27Q86VH2 1401 aa24.32■■□□□ 1.48
PHF10-204ENST00000480008 NESP48681 1621 aa24.29■■□□□ 1.48
PHF10-204ENST00000480008 SUPT16HQ9Y5B9 1047 aaKnown RBP24.28■■□□□ 1.48
PHF10-204ENST00000480008 KCNH8Q96L42 1107 aa24.28■■□□□ 1.48
PHF10-204ENST00000480008 BIVM-ERCC5R4GMW8 1640 aa24.26■■□□□ 1.47
PHF10-204ENST00000480008 CUX2O14529 1486 aa24.26■■□□□ 1.47
PHF10-204ENST00000480008 KIF21BO75037 1637 aa24.26■■□□□ 1.47
PHF10-204ENST00000480008 FANCD2Q9BXW9 1451 aa24.22■■□□□ 1.47
PHF10-204ENST00000480008 FGD5Q6ZNL6 1462 aa24.17■■□□□ 1.46
PHF10-204ENST00000480008 HIRIP3Q9BW71 556 aaPredicted RBP24.15■■□□□ 1.46
PHF10-204ENST00000480008 KANK4Q5T7N3 995 aaPredicted RBP24.14■■□□□ 1.45
PHF10-204ENST00000480008 ATP1B4Q9UN42 357 aaPredicted RBP24.13■■□□□ 1.45
PHF10-204ENST00000480008 P3H3Q8IVL6 736 aa24.12■■□□□ 1.45
PHF10-204ENST00000480008 PRXQ9BXM0 1461 aa24.11■■□□□ 1.45
PHF10-204ENST00000480008 VPS8Q8N3P4 1428 aa24.1■■□□□ 1.45
PHF10-204ENST00000480008 RAD54L2Q9Y4B4 1467 aa24.08■■□□□ 1.45
PHF10-204ENST00000480008 IGF1RP08069 1367 aa24.07■■□□□ 1.44
PHF10-204ENST00000480008 TSHZ2Q9NRE2 1034 aa24.05■■□□□ 1.44
PHF10-204ENST00000480008 CARMIL1Q5VZK9 1371 aa24.05■■□□□ 1.44
PHF10-204ENST00000480008 DDX10Q13206 875 aaKnown RBP24.02■■□□□ 1.44
PHF10-204ENST00000480008 FKBP8Q14318 412 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms