RNA–Protein interactions for RNA: ENST00000476615.1

TTL-203, Transcript of tubulin tyrosine ligase, humanhuman

TSL 3

Gene TTL, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTL-203ENST00000476615 CHIC1Q5VXU3 224 aa26.07■■□□□ 1.76
TTL-203ENST00000476615 AEBP2Q6ZN18 517 aaPredicted RBP25.74■■□□□ 1.71
TTL-203ENST00000476615 PHF23Q9BUL5 403 aaPredicted RBP23.04■■□□□ 1.28
TTL-203ENST00000476615 NISCHQ9Y2I1 1504 aa22.71■■□□□ 1.23
TTL-203ENST00000476615 SENP3Q9H4L4 574 aaPredicted RBP21.66■■□□□ 1.06
TTL-203ENST00000476615 PLPPR3Q6T4P5 718 aa21.58■■□□□ 1.05
TTL-203ENST00000476615 CCDC180Q9P1Z9 1646 aa20.29■□□□□ 0.84
TTL-203ENST00000476615 ADRA2BP18089 450 aa20.2■□□□□ 0.82
TTL-203ENST00000476615 PPP6R1Q9UPN7 881 aa20.02■□□□□ 0.8
TTL-203ENST00000476615 FOXD1Q16676 465 aa20.01■□□□□ 0.79
TTL-203ENST00000476615 ABCC9O60706 1549 aa19.81■□□□□ 0.76
TTL-203ENST00000476615 KCNA4P22459 653 aa19.78■□□□□ 0.76
TTL-203ENST00000476615 EHMT2Q96KQ7 1210 aa19.55■□□□□ 0.72
TTL-203ENST00000476615 PPP4R3CPQ6ZMV5 832 aa19.15■□□□□ 0.66
TTL-203ENST00000476615 NACADO15069 1562 aa19.1■□□□□ 0.65
TTL-203ENST00000476615 RB1CC1Q8TDY2 1594 aa19.1■□□□□ 0.65
TTL-203ENST00000476615 PIAS4Q8N2W9 510 aaPredicted RBP19.08■□□□□ 0.64
TTL-203ENST00000476615 MYO15BQ96JP2 1530 aa19.06■□□□□ 0.64
TTL-203ENST00000476615 SLC4A1APQ9BWU0 796 aaKnown RBP19■□□□□ 0.63
TTL-203ENST00000476615 CSRNP3Q8WYN3 585 aa18.92■□□□□ 0.62
TTL-203ENST00000476615 NCBP3Q53F19 620 aaKnown RBP18.91■□□□□ 0.62
TTL-203ENST00000476615 DCAF1Q9Y4B6 1507 aa18.9■□□□□ 0.62
TTL-203ENST00000476615 ZCCHC6Q5VYS8 1495 aaKnown RBP18.89■□□□□ 0.61
TTL-203ENST00000476615 DCAF8L2P0C7V8 631 aa18.72■□□□□ 0.59
TTL-203ENST00000476615 UNC13AQ9UPW8 1703 aa18.71■□□□□ 0.59
TTL-203ENST00000476615 NPM3O75607 178 aaKnown RBP18.64■□□□□ 0.57
TTL-203ENST00000476615 BICRAQ9NZM4 1560 aa18.6■□□□□ 0.57
TTL-203ENST00000476615 SHROOM4Q9ULL8 1493 aa18.46■□□□□ 0.54
TTL-203ENST00000476615 PABPN1Q86U42 306 aaKnown RBP eCLIP18.45■□□□□ 0.54
TTL-203ENST00000476615 DNAJC5BQ9UF47 199 aa18.41■□□□□ 0.54
TTL-203ENST00000476615 CNKSR2Q8WXI2 1034 aa18.39■□□□□ 0.53
TTL-203ENST00000476615 SCAF1Q9H7N4 1312 aaKnown RBP18.32■□□□□ 0.52
TTL-203ENST00000476615 SCRIBQ14160 1630 aa18.32■□□□□ 0.52
TTL-203ENST00000476615 ZBTB22O15209 634 aa18.23■□□□□ 0.51
TTL-203ENST00000476615 MSH5O43196 834 aa18.06■□□□□ 0.48
TTL-203ENST00000476615 EIF4G1Q04637 1599 aaKnown RBP18.05■□□□□ 0.48
TTL-203ENST00000476615 CC2D2AQ9P2K1 1620 aa17.99■□□□□ 0.47
TTL-203ENST00000476615 FOXD4L1Q9NU39 408 aa17.93■□□□□ 0.46
TTL-203ENST00000476615 MAPK8IP2Q13387 824 aaPredicted RBP17.92■□□□□ 0.46
TTL-203ENST00000476615 CECR2Q9BXF3 1484 aa17.87■□□□□ 0.45
TTL-203ENST00000476615 RNF216Q9NWF9 866 aaPredicted RBP17.8■□□□□ 0.44
TTL-203ENST00000476615 NCAPD3P42695 1498 aa17.65■□□□□ 0.42
TTL-203ENST00000476615 SMARCA4P51532 1647 aa17.62■□□□□ 0.41
TTL-203ENST00000476615 BAZ1AQ9NRL2 1556 aaPredicted RBP17.58■□□□□ 0.41
TTL-203ENST00000476615 PEG3Q9GZU2 1588 aa17.57■□□□□ 0.4
TTL-203ENST00000476615 ATAD2BQ9ULI0 1458 aa17.57■□□□□ 0.4
TTL-203ENST00000476615 SMARCA2P51531 1590 aa17.55■□□□□ 0.4
TTL-203ENST00000476615 HMGXB3Q12766 1538 aa17.53■□□□□ 0.4
TTL-203ENST00000476615 HOXD11P31277 338 aaPredicted RBP17.48■□□□□ 0.39
TTL-203ENST00000476615 MROH2BQ7Z745 1585 aa17.45■□□□□ 0.38
TTL-203ENST00000476615 DMRT2Q9Y5R5 561 aa17.45■□□□□ 0.38
TTL-203ENST00000476615 SLC4A2P04920 1241 aa17.38■□□□□ 0.37
TTL-203ENST00000476615 BAZ1BQ9UIG0 1483 aaKnown RBP17.35■□□□□ 0.37
TTL-203ENST00000476615 WIZO95785 1651 aa17.23■□□□□ 0.35
TTL-203ENST00000476615 RSF1Q96T23 1441 aaPredicted RBP17.22■□□□□ 0.35
TTL-203ENST00000476615 ATXN8OSP0DMR3 200 aa17.22■□□□□ 0.35
TTL-203ENST00000476615 MYCNP04198 464 aaPredicted RBP17.19■□□□□ 0.34
TTL-203ENST00000476615 POTEDQ86YR6 584 aa17.19■□□□□ 0.34
TTL-203ENST00000476615 AMER1Q5JTC6 1135 aaPredicted RBP17.18■□□□□ 0.34
TTL-203ENST00000476615 RTN4Q9NQC3 1192 aaKnown RBP17.18■□□□□ 0.34
TTL-203ENST00000476615 LAMC3Q9Y6N6 1575 aa17.16■□□□□ 0.34
TTL-203ENST00000476615 NESP48681 1621 aa17.14■□□□□ 0.33
TTL-203ENST00000476615 CUX2O14529 1486 aa17.08■□□□□ 0.32
TTL-203ENST00000476615 TOP2AP11388 1531 aaKnown RBP17.07■□□□□ 0.32
TTL-203ENST00000476615 CADPSQ9ULU8 1353 aa17.07■□□□□ 0.32
TTL-203ENST00000476615 SLC24A1O60721 1099 aa17.07■□□□□ 0.32
TTL-203ENST00000476615 ERCC6Q03468 1493 aa17.05■□□□□ 0.32
TTL-203ENST00000476615 FKBP8Q14318 412 aa17.02■□□□□ 0.32
TTL-203ENST00000476615 PDS5BQ9NTI5 1447 aa17.01■□□□□ 0.31
TTL-203ENST00000476615 CFTRP13569 1480 aa16.98■□□□□ 0.31
TTL-203ENST00000476615 THOC2Q8NI27 1593 aaKnown RBP16.98■□□□□ 0.31
TTL-203ENST00000476615 KIF21AQ7Z4S6 1674 aa16.95■□□□□ 0.3
TTL-203ENST00000476615 CCDC88BA6NC98 1476 aa16.86■□□□□ 0.29
TTL-203ENST00000476615 WDR62O43379 1518 aa16.84■□□□□ 0.29
TTL-203ENST00000476615 PRDM2Q13029 1718 aa16.83■□□□□ 0.28
TTL-203ENST00000476615 MRC2Q9UBG0 1479 aa16.83■□□□□ 0.28
TTL-203ENST00000476615 FANCD2Q9BXW9 1451 aa16.82■□□□□ 0.28
TTL-203ENST00000476615 CEP164Q9UPV0 1460 aa16.8■□□□□ 0.28
TTL-203ENST00000476615 DNAJC5Q9H3Z4 198 aa16.74■□□□□ 0.27
TTL-203ENST00000476615 ATF5Q9Y2D1 282 aaPredicted RBP16.69■□□□□ 0.26
TTL-203ENST00000476615 URB2Q14146 1524 aaKnown RBP16.69■□□□□ 0.26
TTL-203ENST00000476615 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.65■□□□□ 0.26
TTL-203ENST00000476615 DCAF8L1A6NGE4 600 aa16.63■□□□□ 0.25
TTL-203ENST00000476615 ABCC8Q09428 1581 aa16.6■□□□□ 0.25
TTL-203ENST00000476615 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.59■□□□□ 0.25
TTL-203ENST00000476615 HNRNPUL2Q1KMD3 747 aaKnown RBP16.59■□□□□ 0.25
TTL-203ENST00000476615 SAMD1Q6SPF0 538 aaPredicted RBP16.58■□□□□ 0.24
TTL-203ENST00000476615 TOPBP1Q92547 1522 aa16.55■□□□□ 0.24
TTL-203ENST00000476615 DNMBPQ6XZF7 1577 aa16.54■□□□□ 0.24
TTL-203ENST00000476615 IFT140Q96RY7 1462 aa16.5■□□□□ 0.23
TTL-203ENST00000476615 U3KPZ7 1027 aaPredicted RBP16.49■□□□□ 0.23
TTL-203ENST00000476615 TARBP1Q13395 1621 aaKnown RBP16.45■□□□□ 0.22
TTL-203ENST00000476615 SUPT5HO00267 1087 aaKnown RBP16.44■□□□□ 0.22
TTL-203ENST00000476615 POLA1P09884 1462 aaPredicted RBP16.42■□□□□ 0.22
TTL-203ENST00000476615 ZNF608Q9ULD9 1512 aaPredicted RBP16.4■□□□□ 0.22
TTL-203ENST00000476615 CUX1P39880 1505 aa16.39■□□□□ 0.21
TTL-203ENST00000476615 WDR97A6NE52 1622 aa16.35■□□□□ 0.21
TTL-203ENST00000476615 EIF4G3O43432 1585 aaKnown RBP16.34■□□□□ 0.21
TTL-203ENST00000476615 FGD5Q6ZNL6 1462 aa16.31■□□□□ 0.2
TTL-203ENST00000476615 SOGA1O94964 1423 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms