RNA–Protein interactions for RNA: ENST00000476347.1

RNF6-206, Transcript of ring finger protein 6, humanhuman

TSL 4

Gene RNF6, Length 633 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6-206ENST00000476347 AEBP2Q6ZN18 517 aaPredicted RBP17.77■□□□□ 0.44
RNF6-206ENST00000476347 CHIC1Q5VXU3 224 aa17.43■□□□□ 0.38
RNF6-206ENST00000476347 PHF23Q9BUL5 403 aaPredicted RBP15.41■□□□□ 0.06
RNF6-206ENST00000476347 SENP3Q9H4L4 574 aaPredicted RBP14.98□□□□□ -0.01
RNF6-206ENST00000476347 NISCHQ9Y2I1 1504 aa14.71□□□□□ -0.05
RNF6-206ENST00000476347 PLPPR3Q6T4P5 718 aa14.2□□□□□ -0.14
RNF6-206ENST00000476347 FOXD1Q16676 465 aa13.99□□□□□ -0.17
RNF6-206ENST00000476347 ADRA2BP18089 450 aa13.58□□□□□ -0.24
RNF6-206ENST00000476347 PPP6R1Q9UPN7 881 aa13.57□□□□□ -0.24
RNF6-206ENST00000476347 ABCC9O60706 1549 aa13.36□□□□□ -0.27
RNF6-206ENST00000476347 CCDC180Q9P1Z9 1646 aa13.26□□□□□ -0.29
RNF6-206ENST00000476347 PIAS4Q8N2W9 510 aaPredicted RBP13.19□□□□□ -0.3
RNF6-206ENST00000476347 MSH5O43196 834 aa12.83□□□□□ -0.36
RNF6-206ENST00000476347 RB1CC1Q8TDY2 1594 aa12.71□□□□□ -0.37
RNF6-206ENST00000476347 DNAJC5BQ9UF47 199 aa12.64□□□□□ -0.39
RNF6-206ENST00000476347 NACADO15069 1562 aa12.6□□□□□ -0.39
RNF6-206ENST00000476347 PPP4R3CPQ6ZMV5 832 aa12.59□□□□□ -0.39
RNF6-206ENST00000476347 DCAF8L2P0C7V8 631 aa12.54□□□□□ -0.4
RNF6-206ENST00000476347 KCNA4P22459 653 aa12.52□□□□□ -0.41
RNF6-206ENST00000476347 PABPN1Q86U42 306 aaKnown RBP eCLIP12.44□□□□□ -0.42
RNF6-206ENST00000476347 MYO15BQ96JP2 1530 aa12.41□□□□□ -0.42
RNF6-206ENST00000476347 UNC13AQ9UPW8 1703 aa12.32□□□□□ -0.44
RNF6-206ENST00000476347 MAPK8IP2Q13387 824 aaPredicted RBP12.29□□□□□ -0.44
RNF6-206ENST00000476347 SCAF1Q9H7N4 1312 aaKnown RBP12.28□□□□□ -0.44
RNF6-206ENST00000476347 BICRAQ9NZM4 1560 aa12.26□□□□□ -0.45
RNF6-206ENST00000476347 NCBP3Q53F19 620 aaKnown RBP12.23□□□□□ -0.45
RNF6-206ENST00000476347 SHROOM4Q9ULL8 1493 aa12.21□□□□□ -0.46
RNF6-206ENST00000476347 DCAF1Q9Y4B6 1507 aa12.18□□□□□ -0.46
RNF6-206ENST00000476347 ZCCHC6Q5VYS8 1495 aaKnown RBP12.14□□□□□ -0.47
RNF6-206ENST00000476347 CNKSR2Q8WXI2 1034 aa12.14□□□□□ -0.47
RNF6-206ENST00000476347 NPM3O75607 178 aaKnown RBP12.13□□□□□ -0.47
RNF6-206ENST00000476347 CECR2Q9BXF3 1484 aa12.08□□□□□ -0.48
RNF6-206ENST00000476347 CC2D2AQ9P2K1 1620 aa12.06□□□□□ -0.48
RNF6-206ENST00000476347 SCRIBQ14160 1630 aa12.02□□□□□ -0.49
RNF6-206ENST00000476347 EIF4G1Q04637 1599 aaKnown RBP12.01□□□□□ -0.49
RNF6-206ENST00000476347 DMRT2Q9Y5R5 561 aa11.98□□□□□ -0.49
RNF6-206ENST00000476347 SLC4A1APQ9BWU0 796 aaKnown RBP11.92□□□□□ -0.5
RNF6-206ENST00000476347 EHMT2Q96KQ7 1210 aa11.87□□□□□ -0.51
RNF6-206ENST00000476347 POTEDQ86YR6 584 aa11.86□□□□□ -0.51
RNF6-206ENST00000476347 RNF216Q9NWF9 866 aaPredicted RBP11.86□□□□□ -0.51
RNF6-206ENST00000476347 DNAJC5Q9H3Z4 198 aa11.8□□□□□ -0.52
RNF6-206ENST00000476347 HOXD11P31277 338 aaPredicted RBP11.77□□□□□ -0.53
RNF6-206ENST00000476347 NCAPD3P42695 1498 aa11.64□□□□□ -0.55
RNF6-206ENST00000476347 CUX2O14529 1486 aa11.63□□□□□ -0.55
RNF6-206ENST00000476347 ERCC6Q03468 1493 aa11.59□□□□□ -0.55
RNF6-206ENST00000476347 DCAF8L1A6NGE4 600 aa11.57□□□□□ -0.56
RNF6-206ENST00000476347 CSRNP3Q8WYN3 585 aa11.57□□□□□ -0.56
RNF6-206ENST00000476347 ZBTB22O15209 634 aa11.56□□□□□ -0.56
RNF6-206ENST00000476347 ATAD2BQ9ULI0 1458 aa11.55□□□□□ -0.56
RNF6-206ENST00000476347 SMARCA2P51531 1590 aa11.54□□□□□ -0.56
RNF6-206ENST00000476347 HMGXB3Q12766 1538 aa11.51□□□□□ -0.57
RNF6-206ENST00000476347 SMARCA4P51532 1647 aa11.48□□□□□ -0.57
RNF6-206ENST00000476347 BAZ1AQ9NRL2 1556 aaPredicted RBP11.45□□□□□ -0.58
RNF6-206ENST00000476347 BAZ1BQ9UIG0 1483 aaKnown RBP11.44□□□□□ -0.58
RNF6-206ENST00000476347 SLC4A2P04920 1241 aa11.43□□□□□ -0.58
RNF6-206ENST00000476347 FOXD4L1Q9NU39 408 aa11.41□□□□□ -0.58
RNF6-206ENST00000476347 NESP48681 1621 aa11.41□□□□□ -0.58
RNF6-206ENST00000476347 PEG3Q9GZU2 1588 aa11.4□□□□□ -0.58
RNF6-206ENST00000476347 LAMC3Q9Y6N6 1575 aa11.39□□□□□ -0.59
RNF6-206ENST00000476347 PDS5BQ9NTI5 1447 aa11.37□□□□□ -0.59
RNF6-206ENST00000476347 THOC2Q8NI27 1593 aaKnown RBP11.32□□□□□ -0.6
RNF6-206ENST00000476347 MROH2BQ7Z745 1585 aa11.29□□□□□ -0.6
RNF6-206ENST00000476347 CADPSQ9ULU8 1353 aa11.28□□□□□ -0.6
RNF6-206ENST00000476347 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.28□□□□□ -0.6
RNF6-206ENST00000476347 KIF21AQ7Z4S6 1674 aa11.25□□□□□ -0.61
RNF6-206ENST00000476347 MRC2Q9UBG0 1479 aa11.22□□□□□ -0.61
RNF6-206ENST00000476347 TRIM41Q8WV44 630 aa11.19□□□□□ -0.62
RNF6-206ENST00000476347 WDR62O43379 1518 aa11.18□□□□□ -0.62
RNF6-206ENST00000476347 MYCNP04198 464 aaPredicted RBP11.16□□□□□ -0.62
RNF6-206ENST00000476347 CEP164Q9UPV0 1460 aa11.16□□□□□ -0.62
RNF6-206ENST00000476347 OSCARQ8IYS5 282 aa11.15□□□□□ -0.62
RNF6-206ENST00000476347 WIZO95785 1651 aa11.14□□□□□ -0.63
RNF6-206ENST00000476347 U3KPZ7 1027 aaPredicted RBP11.13□□□□□ -0.63
RNF6-206ENST00000476347 FANCD2Q9BXW9 1451 aa11.12□□□□□ -0.63
RNF6-206ENST00000476347 CFTRP13569 1480 aa11.11□□□□□ -0.63
RNF6-206ENST00000476347 RSF1Q96T23 1441 aaPredicted RBP11.05□□□□□ -0.64
RNF6-206ENST00000476347 RNF39Q9H2S5 420 aa11.04□□□□□ -0.64
RNF6-206ENST00000476347 TOP2AP11388 1531 aaKnown RBP11.03□□□□□ -0.64
RNF6-206ENST00000476347 URB2Q14146 1524 aaKnown RBP11□□□□□ -0.65
RNF6-206ENST00000476347 IFT140Q96RY7 1462 aa10.96□□□□□ -0.65
RNF6-206ENST00000476347 ATF5Q9Y2D1 282 aaPredicted RBP10.96□□□□□ -0.65
RNF6-206ENST00000476347 ABCC8Q09428 1581 aa10.95□□□□□ -0.66
RNF6-206ENST00000476347 PRDM2Q13029 1718 aa10.94□□□□□ -0.66
RNF6-206ENST00000476347 ATXN8OSP0DMR3 200 aa10.92□□□□□ -0.66
RNF6-206ENST00000476347 SAMD1Q6SPF0 538 aaPredicted RBP10.92□□□□□ -0.66
RNF6-206ENST00000476347 CCDC88BA6NC98 1476 aa10.92□□□□□ -0.66
RNF6-206ENST00000476347 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.91□□□□□ -0.66
RNF6-206ENST00000476347 HNRNPUL2Q1KMD3 747 aaKnown RBP10.91□□□□□ -0.66
RNF6-206ENST00000476347 TOPBP1Q92547 1522 aa10.89□□□□□ -0.67
RNF6-206ENST00000476347 ZNF608Q9ULD9 1512 aaPredicted RBP10.88□□□□□ -0.67
RNF6-206ENST00000476347 RIMBP3CA6NJZ7 1639 aa10.87□□□□□ -0.67
RNF6-206ENST00000476347 RIMBP3BA6NNM3 1639 aa10.87□□□□□ -0.67
RNF6-206ENST00000476347 RIMBP3Q9UFD9 1639 aa10.87□□□□□ -0.67
RNF6-206ENST00000476347 C1QBPQ07021 282 aaKnown RBP10.87□□□□□ -0.67
RNF6-206ENST00000476347 ARHGEF11O15085 1522 aa10.85□□□□□ -0.67
RNF6-206ENST00000476347 CYB5RLQ6IPT4 315 aa10.84□□□□□ -0.67
RNF6-206ENST00000476347 DNMBPQ6XZF7 1577 aa10.83□□□□□ -0.68
RNF6-206ENST00000476347 FBLN2P98095 1184 aa10.82□□□□□ -0.68
RNF6-206ENST00000476347 SPINK5Q9NQ38 1064 aaPredicted RBP10.81□□□□□ -0.68
RNF6-206ENST00000476347 EIF4G3O43432 1585 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms