RNA–Protein interactions for RNA: ENST00000473043.5

RAPGEF4-209, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 5

Gene RAPGEF4, Length 1,075 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-209ENST00000473043 CHIC1Q5VXU3 224 aa21.55■■□□□ 1.04
RAPGEF4-209ENST00000473043 AEBP2Q6ZN18 517 aaPredicted RBP21.04■□□□□ 0.96
RAPGEF4-209ENST00000473043 PHF23Q9BUL5 403 aaPredicted RBP18.94■□□□□ 0.62
RAPGEF4-209ENST00000473043 NISCHQ9Y2I1 1504 aa18.24■□□□□ 0.51
RAPGEF4-209ENST00000473043 PLPPR3Q6T4P5 718 aa17.98■□□□□ 0.47
RAPGEF4-209ENST00000473043 SENP3Q9H4L4 574 aaPredicted RBP17.93■□□□□ 0.46
RAPGEF4-209ENST00000473043 ADRA2BP18089 450 aa16.62■□□□□ 0.25
RAPGEF4-209ENST00000473043 KCNA4P22459 653 aa16.47■□□□□ 0.23
RAPGEF4-209ENST00000473043 EHMT2Q96KQ7 1210 aa16.43■□□□□ 0.22
RAPGEF4-209ENST00000473043 PPP6R1Q9UPN7 881 aa16.41■□□□□ 0.22
RAPGEF4-209ENST00000473043 FOXD1Q16676 465 aa16.4■□□□□ 0.22
RAPGEF4-209ENST00000473043 CCDC180Q9P1Z9 1646 aa16.3■□□□□ 0.2
RAPGEF4-209ENST00000473043 ABCC9O60706 1549 aa16.09■□□□□ 0.17
RAPGEF4-209ENST00000473043 SLC4A1APQ9BWU0 796 aaKnown RBP15.94■□□□□ 0.14
RAPGEF4-209ENST00000473043 PPP4R3CPQ6ZMV5 832 aa15.9■□□□□ 0.14
RAPGEF4-209ENST00000473043 NCBP3Q53F19 620 aaKnown RBP15.89■□□□□ 0.13
RAPGEF4-209ENST00000473043 CSRNP3Q8WYN3 585 aa15.81■□□□□ 0.12
RAPGEF4-209ENST00000473043 PIAS4Q8N2W9 510 aaPredicted RBP15.76■□□□□ 0.11
RAPGEF4-209ENST00000473043 NPM3O75607 178 aaKnown RBP15.47■□□□□ 0.07
RAPGEF4-209ENST00000473043 RB1CC1Q8TDY2 1594 aa15.39■□□□□ 0.05
RAPGEF4-209ENST00000473043 NACADO15069 1562 aa15.34■□□□□ 0.05
RAPGEF4-209ENST00000473043 SCAF1Q9H7N4 1312 aaKnown RBP15.34■□□□□ 0.05
RAPGEF4-209ENST00000473043 CNKSR2Q8WXI2 1034 aa15.31■□□□□ 0.04
RAPGEF4-209ENST00000473043 MYO15BQ96JP2 1530 aa15.22■□□□□ 0.03
RAPGEF4-209ENST00000473043 ZCCHC6Q5VYS8 1495 aaKnown RBP15.19■□□□□ 0.02
RAPGEF4-209ENST00000473043 DCAF8L2P0C7V8 631 aa15.14■□□□□ 0.01
RAPGEF4-209ENST00000473043 DCAF1Q9Y4B6 1507 aa15.1■□□□□ 0.01
RAPGEF4-209ENST00000473043 UNC13AQ9UPW8 1703 aa15.09■□□□□ 0.01
RAPGEF4-209ENST00000473043 ZBTB22O15209 634 aa15.08■□□□□ 0
RAPGEF4-209ENST00000473043 BICRAQ9NZM4 1560 aa15.02□□□□□ -0.01
RAPGEF4-209ENST00000473043 FOXD4L1Q9NU39 408 aa15□□□□□ -0.01
RAPGEF4-209ENST00000473043 DNAJC5BQ9UF47 199 aa14.97□□□□□ -0.01
RAPGEF4-209ENST00000473043 PABPN1Q86U42 306 aaKnown RBP eCLIP14.96□□□□□ -0.01
RAPGEF4-209ENST00000473043 MSH5O43196 834 aa14.93□□□□□ -0.02
RAPGEF4-209ENST00000473043 SCRIBQ14160 1630 aa14.85□□□□□ -0.03
RAPGEF4-209ENST00000473043 SHROOM4Q9ULL8 1493 aa14.8□□□□□ -0.04
RAPGEF4-209ENST00000473043 RNF216Q9NWF9 866 aaPredicted RBP14.78□□□□□ -0.04
RAPGEF4-209ENST00000473043 AMER1Q5JTC6 1135 aaPredicted RBP14.69□□□□□ -0.06
RAPGEF4-209ENST00000473043 SLC24A1O60721 1099 aa14.67□□□□□ -0.06
RAPGEF4-209ENST00000473043 MAPK8IP2Q13387 824 aaPredicted RBP14.66□□□□□ -0.06
RAPGEF4-209ENST00000473043 EIF4G1Q04637 1599 aaKnown RBP14.59□□□□□ -0.07
RAPGEF4-209ENST00000473043 CC2D2AQ9P2K1 1620 aa14.56□□□□□ -0.08
RAPGEF4-209ENST00000473043 RTN4Q9NQC3 1192 aaKnown RBP14.52□□□□□ -0.09
RAPGEF4-209ENST00000473043 CECR2Q9BXF3 1484 aa14.47□□□□□ -0.09
RAPGEF4-209ENST00000473043 ATXN8OSP0DMR3 200 aa14.47□□□□□ -0.09
RAPGEF4-209ENST00000473043 HOXD11P31277 338 aaPredicted RBP14.44□□□□□ -0.1
RAPGEF4-209ENST00000473043 DMRT2Q9Y5R5 561 aa14.4□□□□□ -0.1
RAPGEF4-209ENST00000473043 MYCNP04198 464 aaPredicted RBP14.37□□□□□ -0.11
RAPGEF4-209ENST00000473043 SLC4A2P04920 1241 aa14.34□□□□□ -0.11
RAPGEF4-209ENST00000473043 FKBP8Q14318 412 aa14.3□□□□□ -0.12
RAPGEF4-209ENST00000473043 SMARCA4P51532 1647 aa14.2□□□□□ -0.14
RAPGEF4-209ENST00000473043 NCAPD3P42695 1498 aa14.17□□□□□ -0.14
RAPGEF4-209ENST00000473043 ATAD2BQ9ULI0 1458 aa14.16□□□□□ -0.14
RAPGEF4-209ENST00000473043 BAZ1AQ9NRL2 1556 aaPredicted RBP14.13□□□□□ -0.15
RAPGEF4-209ENST00000473043 SMARCA2P51531 1590 aa14.11□□□□□ -0.15
RAPGEF4-209ENST00000473043 HMGXB3Q12766 1538 aa14.1□□□□□ -0.15
RAPGEF4-209ENST00000473043 MROH2BQ7Z745 1585 aa14.08□□□□□ -0.16
RAPGEF4-209ENST00000473043 PEG3Q9GZU2 1588 aa14.08□□□□□ -0.16
RAPGEF4-209ENST00000473043 BAZ1BQ9UIG0 1483 aaKnown RBP13.99□□□□□ -0.17
RAPGEF4-209ENST00000473043 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.96□□□□□ -0.17
RAPGEF4-209ENST00000473043 HNRNPUL2Q1KMD3 747 aaKnown RBP13.96□□□□□ -0.17
RAPGEF4-209ENST00000473043 NESP48681 1621 aa13.9□□□□□ -0.18
RAPGEF4-209ENST00000473043 WIZO95785 1651 aa13.89□□□□□ -0.19
RAPGEF4-209ENST00000473043 SAMD1Q6SPF0 538 aaPredicted RBP13.89□□□□□ -0.19
RAPGEF4-209ENST00000473043 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.85□□□□□ -0.19
RAPGEF4-209ENST00000473043 RSF1Q96T23 1441 aaPredicted RBP13.83□□□□□ -0.2
RAPGEF4-209ENST00000473043 ERCC6Q03468 1493 aa13.83□□□□□ -0.2
RAPGEF4-209ENST00000473043 LAMC3Q9Y6N6 1575 aa13.81□□□□□ -0.2
RAPGEF4-209ENST00000473043 CUX2O14529 1486 aa13.8□□□□□ -0.2
RAPGEF4-209ENST00000473043 DCAF8L1A6NGE4 600 aa13.77□□□□□ -0.21
RAPGEF4-209ENST00000473043 THOC2Q8NI27 1593 aaKnown RBP13.76□□□□□ -0.21
RAPGEF4-209ENST00000473043 TOP2AP11388 1531 aaKnown RBP13.74□□□□□ -0.21
RAPGEF4-209ENST00000473043 ATF5Q9Y2D1 282 aaPredicted RBP13.73□□□□□ -0.21
RAPGEF4-209ENST00000473043 KIF21AQ7Z4S6 1674 aa13.72□□□□□ -0.21
RAPGEF4-209ENST00000473043 CADPSQ9ULU8 1353 aa13.71□□□□□ -0.21
RAPGEF4-209ENST00000473043 FBXO3Q9UK99 471 aa13.71□□□□□ -0.21
RAPGEF4-209ENST00000473043 PDS5BQ9NTI5 1447 aa13.68□□□□□ -0.22
RAPGEF4-209ENST00000473043 APLP2Q06481 763 aa13.65□□□□□ -0.22
RAPGEF4-209ENST00000473043 CFTRP13569 1480 aa13.63□□□□□ -0.23
RAPGEF4-209ENST00000473043 MRC2Q9UBG0 1479 aa13.61□□□□□ -0.23
RAPGEF4-209ENST00000473043 WDR62O43379 1518 aa13.59□□□□□ -0.23
RAPGEF4-209ENST00000473043 U3KPZ7 1027 aaPredicted RBP13.59□□□□□ -0.23
RAPGEF4-209ENST00000473043 FANCD2Q9BXW9 1451 aa13.58□□□□□ -0.24
RAPGEF4-209ENST00000473043 CEP164Q9UPV0 1460 aa13.57□□□□□ -0.24
RAPGEF4-209ENST00000473043 CCDC88BA6NC98 1476 aa13.56□□□□□ -0.24
RAPGEF4-209ENST00000473043 ZNF219Q9P2Y4 722 aaPredicted RBP13.56□□□□□ -0.24
RAPGEF4-209ENST00000473043 DNAJC5Q9H3Z4 198 aa13.54□□□□□ -0.24
RAPGEF4-209ENST00000473043 PRDM2Q13029 1718 aa13.51□□□□□ -0.25
RAPGEF4-209ENST00000473043 URB2Q14146 1524 aaKnown RBP13.49□□□□□ -0.25
RAPGEF4-209ENST00000473043 SPDYE4A6NLX3 237 aa13.48□□□□□ -0.25
RAPGEF4-209ENST00000473043 PLCB2Q00722 1185 aa13.46□□□□□ -0.25
RAPGEF4-209ENST00000473043 TOPBP1Q92547 1522 aa13.36□□□□□ -0.27
RAPGEF4-209ENST00000473043 VASPP50552 380 aaPredicted RBP13.36□□□□□ -0.27
RAPGEF4-209ENST00000473043 FBLN2P98095 1184 aa13.36□□□□□ -0.27
RAPGEF4-209ENST00000473043 DNMBPQ6XZF7 1577 aa13.32□□□□□ -0.28
RAPGEF4-209ENST00000473043 PROM2Q8N271 834 aa13.31□□□□□ -0.28
RAPGEF4-209ENST00000473043 IFT140Q96RY7 1462 aa13.29□□□□□ -0.28
RAPGEF4-209ENST00000473043 ZNF608Q9ULD9 1512 aaPredicted RBP13.29□□□□□ -0.28
RAPGEF4-209ENST00000473043 HAP1P54257 671 aaPredicted RBP13.28□□□□□ -0.28
RAPGEF4-209ENST00000473043 ABCC8Q09428 1581 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms