RNA–Protein interactions for RNA: ENST00000473037.5

LYST-208, Transcript of lysosomal trafficking regulator, humanhuman

TSL 2

Gene LYST, Length 8,293 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYST-208ENST00000473037 NISCHQ9Y2I1 1504 aa12.2□□□□□ -0.46
LYST-208ENST00000473037 DCAF8L2P0C7V8 631 aa12.04□□□□□ -0.48
LYST-208ENST00000473037 SUPT5HO00267 1087 aaKnown RBP11.38□□□□□ -0.59
LYST-208ENST00000473037 FAM9AQ8IZU1 332 aaPredicted RBP11.27□□□□□ -0.6
LYST-208ENST00000473037 SHROOM4Q9ULL8 1493 aa11.16□□□□□ -0.62
LYST-208ENST00000473037 APLP2Q06481 763 aa11.16□□□□□ -0.62
LYST-208ENST00000473037 PELP1Q8IZL8 1130 aaKnown RBP11.13□□□□□ -0.63
LYST-208ENST00000473037 ZEB1P37275 1124 aaPredicted RBP10.81□□□□□ -0.68
LYST-208ENST00000473037 TRIM41Q8WV44 630 aa10.77□□□□□ -0.69
LYST-208ENST00000473037 EHMT2Q96KQ7 1210 aa10.66□□□□□ -0.7
LYST-208ENST00000473037 UBTFP17480 764 aaKnown RBP10.61□□□□□ -0.71
LYST-208ENST00000473037 CCER1Q8TC90 406 aaPredicted RBP10.6□□□□□ -0.71
LYST-208ENST00000473037 CENPBP07199 599 aaPredicted RBP10.6□□□□□ -0.71
LYST-208ENST00000473037 PCGF6Q9BYE7 350 aa10.52□□□□□ -0.73
LYST-208ENST00000473037 ATP1B4Q9UN42 357 aaPredicted RBP10.48□□□□□ -0.73
LYST-208ENST00000473037 CCDC180Q9P1Z9 1646 aa10.42□□□□□ -0.74
LYST-208ENST00000473037 NEFLP07196 543 aa10.4□□□□□ -0.74
LYST-208ENST00000473037 RANGAP1P46060 587 aaPredicted RBP10.39□□□□□ -0.75
LYST-208ENST00000473037 TTBK1Q5TCY1 1321 aaPredicted RBP10.36□□□□□ -0.75
LYST-208ENST00000473037 TRIM26Q12899 539 aaPredicted RBP10.36□□□□□ -0.75
LYST-208ENST00000473037 ERICH6Q7L0X2 663 aa10.34□□□□□ -0.75
LYST-208ENST00000473037 ABCC9O60706 1549 aa10.29□□□□□ -0.76
LYST-208ENST00000473037 MYT1Q01538 1121 aa10.25□□□□□ -0.77
LYST-208ENST00000473037 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.24□□□□□ -0.77
LYST-208ENST00000473037 HNRNPUL2Q1KMD3 747 aaKnown RBP10.24□□□□□ -0.77
LYST-208ENST00000473037 MYT1LQ9UL68 1186 aa10.2□□□□□ -0.78
LYST-208ENST00000473037 CHIC1Q5VXU3 224 aa10.19□□□□□ -0.78
LYST-208ENST00000473037 ZCCHC6Q5VYS8 1495 aaKnown RBP10.11□□□□□ -0.79
LYST-208ENST00000473037 DAXXQ9UER7 740 aaPredicted RBP10.09□□□□□ -0.79
LYST-208ENST00000473037 RB1CC1Q8TDY2 1594 aa10.06□□□□□ -0.8
LYST-208ENST00000473037 HRCP23327 699 aa10.04□□□□□ -0.8
LYST-208ENST00000473037 ITGAEP38570 1179 aa10.04□□□□□ -0.8
LYST-208ENST00000473037 PABPN1Q86U42 306 aaKnown RBP eCLIP10.03□□□□□ -0.8
LYST-208ENST00000473037 YTHDC1Q96MU7 727 aaKnown RBP10.02□□□□□ -0.81
LYST-208ENST00000473037 CDK11AQ9UQ88 783 aaPredicted RBP10.02□□□□□ -0.81
LYST-208ENST00000473037 SCRIBQ14160 1630 aa10.01□□□□□ -0.81
LYST-208ENST00000473037 NACADO15069 1562 aa10□□□□□ -0.81
LYST-208ENST00000473037 FAM50AQ14320 339 aaKnown RBP9.96□□□□□ -0.81
LYST-208ENST00000473037 ACIN1Q9UKV3 1341 aaKnown RBP9.95□□□□□ -0.82
LYST-208ENST00000473037 LOC105371045A0A1W2PR82 267 aa9.94□□□□□ -0.82
LYST-208ENST00000473037 PPARGC1BQ86YN6 1023 aaKnown RBP9.94□□□□□ -0.82
LYST-208ENST00000473037 POLR3GLQ9BT43 218 aa9.93□□□□□ -0.82
LYST-208ENST00000473037 TRIM52Q96A61 297 aa9.91□□□□□ -0.82
LYST-208ENST00000473037 CSRNP3Q8WYN3 585 aa9.9□□□□□ -0.82
LYST-208ENST00000473037 SLC4A1APQ9BWU0 796 aaKnown RBP9.87□□□□□ -0.83
LYST-208ENST00000473037 EEA1Q15075 1411 aa9.86□□□□□ -0.83
LYST-208ENST00000473037 DCAF1Q9Y4B6 1507 aa9.86□□□□□ -0.83
LYST-208ENST00000473037 DIEXFQ68CQ4 756 aaKnown RBP9.86□□□□□ -0.83
LYST-208ENST00000473037 NEFMP07197 916 aa9.85□□□□□ -0.83
LYST-208ENST00000473037 FBLN2P98095 1184 aa9.85□□□□□ -0.83
LYST-208ENST00000473037 ANP32CO43423 234 aa9.84□□□□□ -0.83
LYST-208ENST00000473037 CLSPNQ9HAW4 1339 aa9.83□□□□□ -0.84
LYST-208ENST00000473037 ZNF316A6NFI3 1004 aaPredicted RBP9.81□□□□□ -0.84
LYST-208ENST00000473037 ZBTB47Q9UFB7 747 aaPredicted RBP9.81□□□□□ -0.84
LYST-208ENST00000473037 NPM1P06748 294 aaKnown RBP eCLIP9.79□□□□□ -0.84
LYST-208ENST00000473037 RTL5Q5HYW3 569 aaPredicted RBP9.78□□□□□ -0.84
LYST-208ENST00000473037 ESF1Q9H501 851 aaKnown RBP9.78□□□□□ -0.84
LYST-208ENST00000473037 BAZ1AQ9NRL2 1556 aaPredicted RBP9.75□□□□□ -0.85
LYST-208ENST00000473037 NEUROD1Q13562 356 aa9.73□□□□□ -0.85
LYST-208ENST00000473037 BAZ1BQ9UIG0 1483 aaKnown RBP9.72□□□□□ -0.85
LYST-208ENST00000473037 RSF1Q96T23 1441 aaPredicted RBP9.71□□□□□ -0.85
LYST-208ENST00000473037 TONSLQ96HA7 1378 aa9.71□□□□□ -0.85
LYST-208ENST00000473037 ZNF326Q5BKZ1 582 aaKnown RBP9.7□□□□□ -0.86
LYST-208ENST00000473037 CANXP27824 592 aaKnown RBP9.67□□□□□ -0.86
LYST-208ENST00000473037 GOLGA3Q08378 1498 aa9.67□□□□□ -0.86
LYST-208ENST00000473037 MTUS2Q5JR59 1369 aa9.66□□□□□ -0.86
LYST-208ENST00000473037 BCANQ96GW7 911 aa9.66□□□□□ -0.86
LYST-208ENST00000473037 MYO15BQ96JP2 1530 aa9.66□□□□□ -0.86
LYST-208ENST00000473037 TSPY4P0CV99 314 aa9.65□□□□□ -0.86
LYST-208ENST00000473037 TSPY10P0CW01 314 aa9.65□□□□□ -0.86
LYST-208ENST00000473037 KIF27Q86VH2 1401 aa9.65□□□□□ -0.86
LYST-208ENST00000473037 CLIP1P30622 1438 aa9.65□□□□□ -0.87
LYST-208ENST00000473037 ZNF777Q9ULD5 760 aaPredicted RBP9.64□□□□□ -0.87
LYST-208ENST00000473037 CHMP7Q8WUX9 453 aaPredicted RBP9.64□□□□□ -0.87
LYST-208ENST00000473037 CNGB1Q14028 1251 aaPredicted RBP9.63□□□□□ -0.87
LYST-208ENST00000473037 STAG3Q9UJ98 1225 aa9.62□□□□□ -0.87
LYST-208ENST00000473037 CEP164Q9UPV0 1460 aa9.62□□□□□ -0.87
LYST-208ENST00000473037 WRNQ14191 1432 aaPredicted RBP eCLIP9.61□□□□□ -0.87
LYST-208ENST00000473037 SMARCA2P51531 1590 aa9.61□□□□□ -0.87
LYST-208ENST00000473037 P3H3Q8IVL6 736 aa9.61□□□□□ -0.87
LYST-208ENST00000473037 SLC24A1O60721 1099 aa9.58□□□□□ -0.88
LYST-208ENST00000473037 FHAD1B1AJZ9 1412 aa9.57□□□□□ -0.88
LYST-208ENST00000473037 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.55□□□□□ -0.88
LYST-208ENST00000473037 UPF2Q9HAU5 1272 aaKnown RBP9.54□□□□□ -0.88
LYST-208ENST00000473037 ANP32AP39687 249 aaKnown RBP9.54□□□□□ -0.88
LYST-208ENST00000473037 ERCC6Q03468 1493 aa9.54□□□□□ -0.88
LYST-208ENST00000473037 PLEKHD1A6NEE1 506 aa9.54□□□□□ -0.88
LYST-208ENST00000473037 CDCA8Q53HL2 280 aa9.53□□□□□ -0.88
LYST-208ENST00000473037 TNIKQ9UKE5 1360 aa9.51□□□□□ -0.89
LYST-208ENST00000473037 EIF5BO60841 1220 aaKnown RBP9.51□□□□□ -0.89
LYST-208ENST00000473037 ARID3CA6NKF2 412 aa9.5□□□□□ -0.89
LYST-208ENST00000473037 CEP162Q5TB80 1403 aa9.5□□□□□ -0.89
LYST-208ENST00000473037 ANP32BQ92688 251 aaKnown RBP9.47□□□□□ -0.89
LYST-208ENST00000473037 CHGAP10645 457 aaKnown RBP9.47□□□□□ -0.89
LYST-208ENST00000473037 TMC1Q8TDI8 760 aa9.46□□□□□ -0.89
LYST-208ENST00000473037 WDR43Q15061 677 aaKnown RBP eCLIP9.46□□□□□ -0.9
LYST-208ENST00000473037 PDS5BQ9NTI5 1447 aa9.46□□□□□ -0.9
LYST-208ENST00000473037 EIF4G2P78344 907 aaKnown RBP eCLIP9.45□□□□□ -0.9
LYST-208ENST00000473037 GTF3C3Q9Y5Q9 886 aa9.44□□□□□ -0.9
LYST-208ENST00000473037 CFDP1Q9UEE9 299 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms