RNA–Protein interactions for RNA: ENST00000470622.1

IPCEF1-204, Transcript of interaction protein for cytohesin exchange factors 1, humanhuman

TSL 3

Gene IPCEF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPCEF1-204ENST00000470622 CHIC1Q5VXU3 224 aa19.53■□□□□ 0.72
IPCEF1-204ENST00000470622 AEBP2Q6ZN18 517 aaPredicted RBP19.25■□□□□ 0.67
IPCEF1-204ENST00000470622 PHF23Q9BUL5 403 aaPredicted RBP17.24■□□□□ 0.35
IPCEF1-204ENST00000470622 SENP3Q9H4L4 574 aaPredicted RBP16.26■□□□□ 0.19
IPCEF1-204ENST00000470622 PLPPR3Q6T4P5 718 aa16.22■□□□□ 0.19
IPCEF1-204ENST00000470622 NISCHQ9Y2I1 1504 aa16.17■□□□□ 0.18
IPCEF1-204ENST00000470622 ADRA2BP18089 450 aa15.17■□□□□ 0.02
IPCEF1-204ENST00000470622 PPP6R1Q9UPN7 881 aa14.99□□□□□ -0.01
IPCEF1-204ENST00000470622 FOXD1Q16676 465 aa14.98□□□□□ -0.01
IPCEF1-204ENST00000470622 KCNA4P22459 653 aa14.9□□□□□ -0.02
IPCEF1-204ENST00000470622 EHMT2Q96KQ7 1210 aa14.84□□□□□ -0.03
IPCEF1-204ENST00000470622 ABCC9O60706 1549 aa14.61□□□□□ -0.07
IPCEF1-204ENST00000470622 CCDC180Q9P1Z9 1646 aa14.48□□□□□ -0.09
IPCEF1-204ENST00000470622 PPP4R3CPQ6ZMV5 832 aa14.39□□□□□ -0.11
IPCEF1-204ENST00000470622 PIAS4Q8N2W9 510 aaPredicted RBP14.37□□□□□ -0.11
IPCEF1-204ENST00000470622 SLC4A1APQ9BWU0 796 aaKnown RBP14.35□□□□□ -0.11
IPCEF1-204ENST00000470622 NCBP3Q53F19 620 aaKnown RBP14.26□□□□□ -0.13
IPCEF1-204ENST00000470622 CSRNP3Q8WYN3 585 aa14.23□□□□□ -0.13
IPCEF1-204ENST00000470622 NPM3O75607 178 aaKnown RBP14.01□□□□□ -0.17
IPCEF1-204ENST00000470622 RB1CC1Q8TDY2 1594 aa13.83□□□□□ -0.19
IPCEF1-204ENST00000470622 CNKSR2Q8WXI2 1034 aa13.82□□□□□ -0.2
IPCEF1-204ENST00000470622 SCAF1Q9H7N4 1312 aaKnown RBP13.79□□□□□ -0.2
IPCEF1-204ENST00000470622 DCAF8L2P0C7V8 631 aa13.73□□□□□ -0.21
IPCEF1-204ENST00000470622 NACADO15069 1562 aa13.73□□□□□ -0.21
IPCEF1-204ENST00000470622 DNAJC5BQ9UF47 199 aa13.72□□□□□ -0.21
IPCEF1-204ENST00000470622 ZBTB22O15209 634 aa13.68□□□□□ -0.22
IPCEF1-204ENST00000470622 PABPN1Q86U42 306 aaKnown RBP eCLIP13.61□□□□□ -0.23
IPCEF1-204ENST00000470622 MSH5O43196 834 aa13.55□□□□□ -0.24
IPCEF1-204ENST00000470622 MYO15BQ96JP2 1530 aa13.5□□□□□ -0.25
IPCEF1-204ENST00000470622 FOXD4L1Q9NU39 408 aa13.5□□□□□ -0.25
IPCEF1-204ENST00000470622 UNC13AQ9UPW8 1703 aa13.46□□□□□ -0.25
IPCEF1-204ENST00000470622 MAPK8IP2Q13387 824 aaPredicted RBP13.43□□□□□ -0.26
IPCEF1-204ENST00000470622 BICRAQ9NZM4 1560 aa13.43□□□□□ -0.26
IPCEF1-204ENST00000470622 ZCCHC6Q5VYS8 1495 aaKnown RBP13.4□□□□□ -0.26
IPCEF1-204ENST00000470622 RNF216Q9NWF9 866 aaPredicted RBP13.34□□□□□ -0.27
IPCEF1-204ENST00000470622 DCAF1Q9Y4B6 1507 aa13.33□□□□□ -0.28
IPCEF1-204ENST00000470622 SCRIBQ14160 1630 aa13.26□□□□□ -0.29
IPCEF1-204ENST00000470622 SHROOM4Q9ULL8 1493 aa13.23□□□□□ -0.29
IPCEF1-204ENST00000470622 CC2D2AQ9P2K1 1620 aa13.16□□□□□ -0.3
IPCEF1-204ENST00000470622 CECR2Q9BXF3 1484 aa13.15□□□□□ -0.3
IPCEF1-204ENST00000470622 EIF4G1Q04637 1599 aaKnown RBP13.11□□□□□ -0.31
IPCEF1-204ENST00000470622 DMRT2Q9Y5R5 561 aa13.08□□□□□ -0.32
IPCEF1-204ENST00000470622 HOXD11P31277 338 aaPredicted RBP13.06□□□□□ -0.32
IPCEF1-204ENST00000470622 AMER1Q5JTC6 1135 aaPredicted RBP13.03□□□□□ -0.32
IPCEF1-204ENST00000470622 SLC4A2P04920 1241 aa13.02□□□□□ -0.33
IPCEF1-204ENST00000470622 RTN4Q9NQC3 1192 aaKnown RBP13.01□□□□□ -0.33
IPCEF1-204ENST00000470622 SLC24A1O60721 1099 aa12.98□□□□□ -0.33
IPCEF1-204ENST00000470622 MYCNP04198 464 aaPredicted RBP12.94□□□□□ -0.34
IPCEF1-204ENST00000470622 ATXN8OSP0DMR3 200 aa12.93□□□□□ -0.34
IPCEF1-204ENST00000470622 FKBP8Q14318 412 aa12.88□□□□□ -0.35
IPCEF1-204ENST00000470622 NCAPD3P42695 1498 aa12.68□□□□□ -0.38
IPCEF1-204ENST00000470622 ATAD2BQ9ULI0 1458 aa12.66□□□□□ -0.38
IPCEF1-204ENST00000470622 SMARCA4P51532 1647 aa12.62□□□□□ -0.39
IPCEF1-204ENST00000470622 ERCC6Q03468 1493 aa12.61□□□□□ -0.39
IPCEF1-204ENST00000470622 DCAF8L1A6NGE4 600 aa12.61□□□□□ -0.39
IPCEF1-204ENST00000470622 DNAJC5Q9H3Z4 198 aa12.61□□□□□ -0.39
IPCEF1-204ENST00000470622 SMARCA2P51531 1590 aa12.6□□□□□ -0.39
IPCEF1-204ENST00000470622 HMGXB3Q12766 1538 aa12.57□□□□□ -0.4
IPCEF1-204ENST00000470622 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.57□□□□□ -0.4
IPCEF1-204ENST00000470622 CUX2O14529 1486 aa12.57□□□□□ -0.4
IPCEF1-204ENST00000470622 BAZ1AQ9NRL2 1556 aaPredicted RBP12.56□□□□□ -0.4
IPCEF1-204ENST00000470622 BAZ1BQ9UIG0 1483 aaKnown RBP12.53□□□□□ -0.4
IPCEF1-204ENST00000470622 NESP48681 1621 aa12.52□□□□□ -0.4
IPCEF1-204ENST00000470622 ATF5Q9Y2D1 282 aaPredicted RBP12.52□□□□□ -0.41
IPCEF1-204ENST00000470622 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.5□□□□□ -0.41
IPCEF1-204ENST00000470622 HNRNPUL2Q1KMD3 747 aaKnown RBP12.5□□□□□ -0.41
IPCEF1-204ENST00000470622 SAMD1Q6SPF0 538 aaPredicted RBP12.49□□□□□ -0.41
IPCEF1-204ENST00000470622 MROH2BQ7Z745 1585 aa12.47□□□□□ -0.41
IPCEF1-204ENST00000470622 PEG3Q9GZU2 1588 aa12.47□□□□□ -0.41
IPCEF1-204ENST00000470622 LAMC3Q9Y6N6 1575 aa12.39□□□□□ -0.43
IPCEF1-204ENST00000470622 U3KPZ7 1027 aaPredicted RBP12.38□□□□□ -0.43
IPCEF1-204ENST00000470622 THOC2Q8NI27 1593 aaKnown RBP12.38□□□□□ -0.43
IPCEF1-204ENST00000470622 PDS5BQ9NTI5 1447 aa12.35□□□□□ -0.43
IPCEF1-204ENST00000470622 CADPSQ9ULU8 1353 aa12.31□□□□□ -0.44
IPCEF1-204ENST00000470622 WIZO95785 1651 aa12.31□□□□□ -0.44
IPCEF1-204ENST00000470622 KIF21AQ7Z4S6 1674 aa12.31□□□□□ -0.44
IPCEF1-204ENST00000470622 ZNF219Q9P2Y4 722 aaPredicted RBP12.26□□□□□ -0.45
IPCEF1-204ENST00000470622 MRC2Q9UBG0 1479 aa12.25□□□□□ -0.45
IPCEF1-204ENST00000470622 APLP2Q06481 763 aa12.22□□□□□ -0.45
IPCEF1-204ENST00000470622 FBXO3Q9UK99 471 aa12.21□□□□□ -0.45
IPCEF1-204ENST00000470622 WDR62O43379 1518 aa12.21□□□□□ -0.46
IPCEF1-204ENST00000470622 RSF1Q96T23 1441 aaPredicted RBP12.2□□□□□ -0.46
IPCEF1-204ENST00000470622 CEP164Q9UPV0 1460 aa12.19□□□□□ -0.46
IPCEF1-204ENST00000470622 FANCD2Q9BXW9 1451 aa12.18□□□□□ -0.46
IPCEF1-204ENST00000470622 TOP2AP11388 1531 aaKnown RBP12.16□□□□□ -0.46
IPCEF1-204ENST00000470622 CFTRP13569 1480 aa12.15□□□□□ -0.46
IPCEF1-204ENST00000470622 SPDYE4A6NLX3 237 aa12.15□□□□□ -0.46
IPCEF1-204ENST00000470622 TRIM41Q8WV44 630 aa12.09□□□□□ -0.47
IPCEF1-204ENST00000470622 URB2Q14146 1524 aaKnown RBP12.07□□□□□ -0.48
IPCEF1-204ENST00000470622 CCDC88BA6NC98 1476 aa12.03□□□□□ -0.48
IPCEF1-204ENST00000470622 FBLN2P98095 1184 aa12.02□□□□□ -0.49
IPCEF1-204ENST00000470622 VASPP50552 380 aaPredicted RBP12.01□□□□□ -0.49
IPCEF1-204ENST00000470622 MKRN4PQ13434 485 aaPredicted RBP12□□□□□ -0.49
IPCEF1-204ENST00000470622 OSCARQ8IYS5 282 aa12□□□□□ -0.49
IPCEF1-204ENST00000470622 PLCB2Q00722 1185 aa11.98□□□□□ -0.49
IPCEF1-204ENST00000470622 PRDM2Q13029 1718 aa11.95□□□□□ -0.5
IPCEF1-204ENST00000470622 ZNF608Q9ULD9 1512 aaPredicted RBP11.95□□□□□ -0.5
IPCEF1-204ENST00000470622 IFT140Q96RY7 1462 aa11.95□□□□□ -0.5
IPCEF1-204ENST00000470622 PROM2Q8N271 834 aa11.94□□□□□ -0.5
IPCEF1-204ENST00000470622 TOPBP1Q92547 1522 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms