RNA–Protein interactions for RNA: ENST00000469025.1

OPTN-209, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 642 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-209ENST00000469025 AEBP2Q6ZN18 517 aaPredicted RBP23.36■■□□□ 1.33
OPTN-209ENST00000469025 CHIC1Q5VXU3 224 aa22.45■■□□□ 1.18
OPTN-209ENST00000469025 SENP3Q9H4L4 574 aaPredicted RBP19.92■□□□□ 0.78
OPTN-209ENST00000469025 PHF23Q9BUL5 403 aaPredicted RBP19.67■□□□□ 0.74
OPTN-209ENST00000469025 FOXD1Q16676 465 aa18.5■□□□□ 0.55
OPTN-209ENST00000469025 PLPPR3Q6T4P5 718 aa18.06■□□□□ 0.48
OPTN-209ENST00000469025 PPP6R1Q9UPN7 881 aa17.47■□□□□ 0.39
OPTN-209ENST00000469025 ADRA2BP18089 450 aa17.43■□□□□ 0.38
OPTN-209ENST00000469025 PIAS4Q8N2W9 510 aaPredicted RBP17.36■□□□□ 0.37
OPTN-209ENST00000469025 MSH5O43196 834 aa17.26■□□□□ 0.35
OPTN-209ENST00000469025 POTEDQ86YR6 584 aa16.4■□□□□ 0.22
OPTN-209ENST00000469025 SCAF1Q9H7N4 1312 aaKnown RBP15.99■□□□□ 0.15
OPTN-209ENST00000469025 MAPK8IP2Q13387 824 aaPredicted RBP15.93■□□□□ 0.14
OPTN-209ENST00000469025 PPP4R3CPQ6ZMV5 832 aa15.84■□□□□ 0.13
OPTN-209ENST00000469025 DMRT2Q9Y5R5 561 aa15.84■□□□□ 0.13
OPTN-209ENST00000469025 DNAJC5BQ9UF47 199 aa15.53■□□□□ 0.08
OPTN-209ENST00000469025 CNKSR2Q8WXI2 1034 aa15.5■□□□□ 0.07
OPTN-209ENST00000469025 DNAJC5Q9H3Z4 198 aa15.41■□□□□ 0.06
OPTN-209ENST00000469025 HOXD11P31277 338 aaPredicted RBP15.35■□□□□ 0.05
OPTN-209ENST00000469025 NCBP3Q53F19 620 aaKnown RBP15.33■□□□□ 0.04
OPTN-209ENST00000469025 RNF216Q9NWF9 866 aaPredicted RBP15.3■□□□□ 0.04
OPTN-209ENST00000469025 DCAF8L1A6NGE4 600 aa15.13■□□□□ 0.01
OPTN-209ENST00000469025 ABCC9O60706 1549 aa15.12■□□□□ 0.01
OPTN-209ENST00000469025 NPM3O75607 178 aaKnown RBP15.09■□□□□ 0.01
OPTN-209ENST00000469025 KCNA4P22459 653 aa15.01□□□□□ -0.01
OPTN-209ENST00000469025 RNF39Q9H2S5 420 aa14.74□□□□□ -0.05
OPTN-209ENST00000469025 CACNB1Q02641 598 aaPredicted RBP14.63□□□□□ -0.07
OPTN-209ENST00000469025 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.61□□□□□ -0.071e-9■■□□□ 12.2
OPTN-209ENST00000469025 NISCHQ9Y2I1 1504 aa14.6□□□□□ -0.07
OPTN-209ENST00000469025 C1QBPQ07021 282 aaKnown RBP14.55□□□□□ -0.08
OPTN-209ENST00000469025 SLC4A2P04920 1241 aa14.34□□□□□ -0.11
OPTN-209ENST00000469025 U3KPZ7 1027 aaPredicted RBP14.33□□□□□ -0.12
OPTN-209ENST00000469025 SLC4A1APQ9BWU0 796 aaKnown RBP14.23□□□□□ -0.13
OPTN-209ENST00000469025 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.04□□□□□ -0.16
OPTN-209ENST00000469025 HNRNPUL2Q1KMD3 747 aaKnown RBP14.04□□□□□ -0.16
OPTN-209ENST00000469025 SPINK5Q9NQ38 1064 aaPredicted RBP14.03□□□□□ -0.16
OPTN-209ENST00000469025 CAPN15O75808 1086 aa14□□□□□ -0.17
OPTN-209ENST00000469025 APLP2Q06481 763 aa14□□□□□ -0.17
OPTN-209ENST00000469025 TRIM41Q8WV44 630 aa13.98□□□□□ -0.17
OPTN-209ENST00000469025 MYCNP04198 464 aaPredicted RBP13.97□□□□□ -0.17
OPTN-209ENST00000469025 SAMD1Q6SPF0 538 aaPredicted RBP13.97□□□□□ -0.17
OPTN-209ENST00000469025 FOXD4L1Q9NU39 408 aa13.96□□□□□ -0.17
OPTN-209ENST00000469025 DSG3P32926 999 aa13.87□□□□□ -0.19
OPTN-209ENST00000469025 ZNF219Q9P2Y4 722 aaPredicted RBP13.86□□□□□ -0.19
OPTN-209ENST00000469025 TRHP20396 242 aaPredicted RBP13.83□□□□□ -0.2
OPTN-209ENST00000469025 CECR2Q9BXF3 1484 aa13.82□□□□□ -0.2
OPTN-209ENST00000469025 RB1CC1Q8TDY2 1594 aa13.82□□□□□ -0.2
OPTN-209ENST00000469025 ZBTB22O15209 634 aa13.81□□□□□ -0.2
OPTN-209ENST00000469025 CCDC180Q9P1Z9 1646 aa13.81□□□□□ -0.2
OPTN-209ENST00000469025 PABPN1Q86U42 306 aaKnown RBP eCLIP13.78□□□□□ -0.27e-9■□□□□ 10
OPTN-209ENST00000469025 CUX2O14529 1486 aa13.75□□□□□ -0.21
OPTN-209ENST00000469025 ABCB7O75027 752 aa13.69□□□□□ -0.22
OPTN-209ENST00000469025 CC2D2AQ9P2K1 1620 aa13.65□□□□□ -0.22
OPTN-209ENST00000469025 ATF5Q9Y2D1 282 aaPredicted RBP13.59□□□□□ -0.23
OPTN-209ENST00000469025 UNC13AQ9UPW8 1703 aa13.54□□□□□ -0.24
OPTN-209ENST00000469025 ATXN8OSP0DMR3 200 aa13.52□□□□□ -0.25
OPTN-209ENST00000469025 POLA2Q14181 598 aa13.52□□□□□ -0.25
OPTN-209ENST00000469025 BICRAQ9NZM4 1560 aa13.49□□□□□ -0.25
OPTN-209ENST00000469025 ILDR1Q86SU0 546 aaPredicted RBP13.43□□□□□ -0.26
OPTN-209ENST00000469025 CSRNP3Q8WYN3 585 aa13.39□□□□□ -0.27
OPTN-209ENST00000469025 NACADO15069 1562 aa13.38□□□□□ -0.27
OPTN-209ENST00000469025 EHMT2Q96KQ7 1210 aa13.34□□□□□ -0.27
OPTN-209ENST00000469025 ZBTB12Q9Y330 459 aaPredicted RBP13.32□□□□□ -0.28
OPTN-209ENST00000469025 EIF4G1Q04637 1599 aaKnown RBP13.26□□□□□ -0.29
OPTN-209ENST00000469025 RBM42Q9BTD8 480 aaKnown RBP13.26□□□□□ -0.29
OPTN-209ENST00000469025 SHROOM4Q9ULL8 1493 aa13.23□□□□□ -0.29
OPTN-209ENST00000469025 ERCC6Q03468 1493 aa13.17□□□□□ -0.3
OPTN-209ENST00000469025 OSCARQ8IYS5 282 aa13.1□□□□□ -0.31
OPTN-209ENST00000469025 FBLN2P98095 1184 aa13.07□□□□□ -0.32
OPTN-209ENST00000469025 AKT1S1Q96B36 256 aa13□□□□□ -0.33
OPTN-209ENST00000469025 MKRN4PQ13434 485 aaPredicted RBP12.99□□□□□ -0.33
OPTN-209ENST00000469025 SPDYE2BA6NHP3 402 aa12.91□□□□□ -0.34
OPTN-209ENST00000469025 SPDYE6P0CI01 402 aa12.91□□□□□ -0.34
OPTN-209ENST00000469025 SPDYE2Q495Y8 402 aa12.91□□□□□ -0.34
OPTN-209ENST00000469025 POTEHQ6S545 545 aa12.9□□□□□ -0.34
OPTN-209ENST00000469025 REM2Q8IYK8 340 aaPredicted RBP12.86□□□□□ -0.35
OPTN-209ENST00000469025 CHRDL2Q6WN34 429 aa12.85□□□□□ -0.35
OPTN-209ENST00000469025 RIMBP3CA6NJZ7 1639 aa12.84□□□□□ -0.35
OPTN-209ENST00000469025 RIMBP3BA6NNM3 1639 aa12.84□□□□□ -0.35
OPTN-209ENST00000469025 RIMBP3Q9UFD9 1639 aa12.84□□□□□ -0.35
OPTN-209ENST00000469025 THOC2Q8NI27 1593 aaKnown RBP12.84□□□□□ -0.35
OPTN-209ENST00000469025 SSUH2Q9Y2M2 353 aa12.78□□□□□ -0.36
OPTN-209ENST00000469025 ZNF692Q9BU19 519 aaPredicted RBP12.77□□□□□ -0.37
OPTN-209ENST00000469025 BAZ1AQ9NRL2 1556 aaPredicted RBP12.77□□□□□ -0.37
OPTN-209ENST00000469025 MYO15BQ96JP2 1530 aa12.76□□□□□ -0.37
OPTN-209ENST00000469025 DCAF8L2P0C7V8 631 aa12.75□□□□□ -0.37
OPTN-209ENST00000469025 PITPNM1O00562 1244 aa12.72□□□□□ -0.37
OPTN-209ENST00000469025 SOCS7O14512 581 aa12.65□□□□□ -0.38
OPTN-209ENST00000469025 ARHGEF11O15085 1522 aa12.64□□□□□ -0.39
OPTN-209ENST00000469025 LMTK3Q96Q04 1460 aa12.64□□□□□ -0.39
OPTN-209ENST00000469025 SPDYE1Q8NFV5 336 aaPredicted RBP12.62□□□□□ -0.39
OPTN-209ENST00000469025 PIP4P2Q8N4L2 257 aa12.59□□□□□ -0.39
OPTN-209ENST00000469025 FXR2P51116 673 aaKnown RBP eCLIP12.57□□□□□ -0.4
OPTN-209ENST00000469025 NESP48681 1621 aa12.57□□□□□ -0.4
OPTN-209ENST00000469025 CLEC11AQ9Y240 323 aa12.55□□□□□ -0.4
OPTN-209ENST00000469025 CYB5RLQ6IPT4 315 aa12.54□□□□□ -0.4
OPTN-209ENST00000469025 SPDYE4A6NLX3 237 aa12.51□□□□□ -0.41
OPTN-209ENST00000469025 FBXO41Q8TF61 875 aa12.5□□□□□ -0.41
OPTN-209ENST00000469025 SMARCA2P51531 1590 aa12.5□□□□□ -0.41
OPTN-209ENST00000469025 SCRIBQ14160 1630 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms