RNA–Protein interactions for RNA: ENST00000467817.1

CALB2-203, Transcript of calbindin 2, humanhuman

TSL 2

Gene CALB2, Length 424 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALB2-203ENST00000467817 AEBP2Q6ZN18 517 aaPredicted RBP23.39■■□□□ 1.33
CALB2-203ENST00000467817 CHIC1Q5VXU3 224 aa22.58■■□□□ 1.21
CALB2-203ENST00000467817 SENP3Q9H4L4 574 aaPredicted RBP20.02■□□□□ 0.8
CALB2-203ENST00000467817 PHF23Q9BUL5 403 aaPredicted RBP19.77■□□□□ 0.76
CALB2-203ENST00000467817 FOXD1Q16676 465 aa18.54■□□□□ 0.56
CALB2-203ENST00000467817 PLPPR3Q6T4P5 718 aa18.24■□□□□ 0.51
CALB2-203ENST00000467817 PPP6R1Q9UPN7 881 aa17.55■□□□□ 0.4
CALB2-203ENST00000467817 NISCHQ9Y2I1 1504 aa17.53■□□□□ 0.4
CALB2-203ENST00000467817 ADRA2BP18089 450 aa17.53■□□□□ 0.4
CALB2-203ENST00000467817 PIAS4Q8N2W9 510 aaPredicted RBP17.44■□□□□ 0.38
CALB2-203ENST00000467817 MSH5O43196 834 aa17.33■□□□□ 0.36
CALB2-203ENST00000467817 POTEDQ86YR6 584 aa16.3■□□□□ 0.2
CALB2-203ENST00000467817 SCAF1Q9H7N4 1312 aaKnown RBP16.19■□□□□ 0.18
CALB2-203ENST00000467817 PPP4R3CPQ6ZMV5 832 aa16.04■□□□□ 0.16
CALB2-203ENST00000467817 MAPK8IP2Q13387 824 aaPredicted RBP15.99■□□□□ 0.15
CALB2-203ENST00000467817 DMRT2Q9Y5R5 561 aa15.9■□□□□ 0.14
CALB2-203ENST00000467817 KCNA4P22459 653 aa15.78■□□□□ 0.12
CALB2-203ENST00000467817 CNKSR2Q8WXI2 1034 aa15.66■□□□□ 0.1
CALB2-203ENST00000467817 CCDC180Q9P1Z9 1646 aa15.65■□□□□ 0.1
CALB2-203ENST00000467817 NCBP3Q53F19 620 aaKnown RBP15.62■□□□□ 0.09
CALB2-203ENST00000467817 ABCC9O60706 1549 aa15.5■□□□□ 0.07
CALB2-203ENST00000467817 HOXD11P31277 338 aaPredicted RBP15.44■□□□□ 0.06
CALB2-203ENST00000467817 NPM3O75607 178 aaKnown RBP15.43■□□□□ 0.06
CALB2-203ENST00000467817 RNF216Q9NWF9 866 aaPredicted RBP15.43■□□□□ 0.06
CALB2-203ENST00000467817 DCAF8L1A6NGE4 600 aa15.23■□□□□ 0.03
CALB2-203ENST00000467817 SLC4A1APQ9BWU0 796 aaKnown RBP15.03■□□□□ -0
CALB2-203ENST00000467817 DNAJC5BQ9UF47 199 aa14.92□□□□□ -0.02
CALB2-203ENST00000467817 RNF39Q9H2S5 420 aa14.77□□□□□ -0.05
CALB2-203ENST00000467817 RB1CC1Q8TDY2 1594 aa14.77□□□□□ -0.05
CALB2-203ENST00000467817 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.73□□□□□ -0.05
CALB2-203ENST00000467817 NACADO15069 1562 aa14.73□□□□□ -0.05
CALB2-203ENST00000467817 EHMT2Q96KQ7 1210 aa14.72□□□□□ -0.05
CALB2-203ENST00000467817 CACNB1Q02641 598 aaPredicted RBP14.65□□□□□ -0.06
CALB2-203ENST00000467817 MYO15BQ96JP2 1530 aa14.62□□□□□ -0.07
CALB2-203ENST00000467817 C1QBPQ07021 282 aaKnown RBP14.62□□□□□ -0.07
CALB2-203ENST00000467817 UNC13AQ9UPW8 1703 aa14.61□□□□□ -0.07
CALB2-203ENST00000467817 ZCCHC6Q5VYS8 1495 aaKnown RBP14.59□□□□□ -0.07
CALB2-203ENST00000467817 SLC4A2P04920 1241 aa14.55□□□□□ -0.08
CALB2-203ENST00000467817 BICRAQ9NZM4 1560 aa14.53□□□□□ -0.08
CALB2-203ENST00000467817 ZBTB22O15209 634 aa14.53□□□□□ -0.08
CALB2-203ENST00000467817 DCAF1Q9Y4B6 1507 aa14.5□□□□□ -0.09
CALB2-203ENST00000467817 CSRNP3Q8WYN3 585 aa14.49□□□□□ -0.09
CALB2-203ENST00000467817 DCAF8L2P0C7V8 631 aa14.48□□□□□ -0.09
CALB2-203ENST00000467817 FOXD4L1Q9NU39 408 aa14.48□□□□□ -0.09
CALB2-203ENST00000467817 PABPN1Q86U42 306 aaKnown RBP eCLIP14.43□□□□□ -0.1
CALB2-203ENST00000467817 U3KPZ7 1027 aaPredicted RBP14.39□□□□□ -0.11
CALB2-203ENST00000467817 SCRIBQ14160 1630 aa14.26□□□□□ -0.13
CALB2-203ENST00000467817 MYCNP04198 464 aaPredicted RBP14.24□□□□□ -0.13
CALB2-203ENST00000467817 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.23□□□□□ -0.13
CALB2-203ENST00000467817 HNRNPUL2Q1KMD3 747 aaKnown RBP14.23□□□□□ -0.13
CALB2-203ENST00000467817 APLP2Q06481 763 aa14.19□□□□□ -0.14
CALB2-203ENST00000467817 SHROOM4Q9ULL8 1493 aa14.17□□□□□ -0.14
CALB2-203ENST00000467817 SAMD1Q6SPF0 538 aaPredicted RBP14.13□□□□□ -0.15
CALB2-203ENST00000467817 CAPN15O75808 1086 aa14.1□□□□□ -0.15
CALB2-203ENST00000467817 SPINK5Q9NQ38 1064 aaPredicted RBP14.08□□□□□ -0.16
CALB2-203ENST00000467817 EIF4G1Q04637 1599 aaKnown RBP14.05□□□□□ -0.16
CALB2-203ENST00000467817 CC2D2AQ9P2K1 1620 aa14.04□□□□□ -0.16
CALB2-203ENST00000467817 ZNF219Q9P2Y4 722 aaPredicted RBP13.98□□□□□ -0.17
CALB2-203ENST00000467817 ATXN8OSP0DMR3 200 aa13.95□□□□□ -0.18
CALB2-203ENST00000467817 TRHP20396 242 aaPredicted RBP13.93□□□□□ -0.18
CALB2-203ENST00000467817 DSG3P32926 999 aa13.93□□□□□ -0.18
CALB2-203ENST00000467817 CECR2Q9BXF3 1484 aa13.93□□□□□ -0.18
CALB2-203ENST00000467817 ATF5Q9Y2D1 282 aaPredicted RBP13.89□□□□□ -0.19
CALB2-203ENST00000467817 ABCB7O75027 752 aa13.75□□□□□ -0.21
CALB2-203ENST00000467817 SMARCA4P51532 1647 aa13.64□□□□□ -0.23
CALB2-203ENST00000467817 NCAPD3P42695 1498 aa13.64□□□□□ -0.23
CALB2-203ENST00000467817 POLA2Q14181 598 aa13.64□□□□□ -0.23
CALB2-203ENST00000467817 ATAD2BQ9ULI0 1458 aa13.63□□□□□ -0.23
CALB2-203ENST00000467817 PEG3Q9GZU2 1588 aa13.56□□□□□ -0.24
CALB2-203ENST00000467817 MROH2BQ7Z745 1585 aa13.55□□□□□ -0.24
CALB2-203ENST00000467817 HMGXB3Q12766 1538 aa13.54□□□□□ -0.24
CALB2-203ENST00000467817 BAZ1AQ9NRL2 1556 aaPredicted RBP13.54□□□□□ -0.24
CALB2-203ENST00000467817 SUPT5HO00267 1087 aaKnown RBP13.52□□□□□ -0.25
CALB2-203ENST00000467817 SMARCA2P51531 1590 aa13.51□□□□□ -0.25
CALB2-203ENST00000467817 ZBTB12Q9Y330 459 aaPredicted RBP13.47□□□□□ -0.25
CALB2-203ENST00000467817 NESP48681 1621 aa13.42□□□□□ -0.26
CALB2-203ENST00000467817 BAZ1BQ9UIG0 1483 aaKnown RBP13.41□□□□□ -0.26
CALB2-203ENST00000467817 WIZO95785 1651 aa13.37□□□□□ -0.27
CALB2-203ENST00000467817 RBM42Q9BTD8 480 aaKnown RBP13.37□□□□□ -0.27
CALB2-203ENST00000467817 RSF1Q96T23 1441 aaPredicted RBP13.3□□□□□ -0.28
CALB2-203ENST00000467817 THOC2Q8NI27 1593 aaKnown RBP13.28□□□□□ -0.28
CALB2-203ENST00000467817 MKRN4PQ13434 485 aaPredicted RBP13.28□□□□□ -0.28
CALB2-203ENST00000467817 CUX2O14529 1486 aa13.26□□□□□ -0.29
CALB2-203ENST00000467817 FBLN2P98095 1184 aa13.26□□□□□ -0.29
CALB2-203ENST00000467817 LAMC3Q9Y6N6 1575 aa13.26□□□□□ -0.29
CALB2-203ENST00000467817 ERCC6Q03468 1493 aa13.24□□□□□ -0.29
CALB2-203ENST00000467817 KIF21AQ7Z4S6 1674 aa13.24□□□□□ -0.29
CALB2-203ENST00000467817 CADPSQ9ULU8 1353 aa13.19□□□□□ -0.3
CALB2-203ENST00000467817 TOP2AP11388 1531 aaKnown RBP13.18□□□□□ -0.3
CALB2-203ENST00000467817 OSCARQ8IYS5 282 aa13.16□□□□□ -0.3
CALB2-203ENST00000467817 DNAJC5Q9H3Z4 198 aa13.13□□□□□ -0.31
CALB2-203ENST00000467817 CFTRP13569 1480 aa13.11□□□□□ -0.31
CALB2-203ENST00000467817 FKBP8Q14318 412 aa13.1□□□□□ -0.31
CALB2-203ENST00000467817 AKT1S1Q96B36 256 aa13.1□□□□□ -0.31
CALB2-203ENST00000467817 PDS5BQ9NTI5 1447 aa13.1□□□□□ -0.31
CALB2-203ENST00000467817 WDR62O43379 1518 aa13.08□□□□□ -0.31
CALB2-203ENST00000467817 MRC2Q9UBG0 1479 aa13.05□□□□□ -0.32
CALB2-203ENST00000467817 CCDC88BA6NC98 1476 aa13.04□□□□□ -0.32
CALB2-203ENST00000467817 SPDYE2BA6NHP3 402 aa13.04□□□□□ -0.32
CALB2-203ENST00000467817 SPDYE6P0CI01 402 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms