RNA–Protein interactions for RNA: ENST00000463953.5

BPNT1-204, Transcript of 3'(2'), 5'-bisphosphate nucleotidase 1, humanhuman

TSL 3

Gene BPNT1, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPNT1-204ENST00000463953 AEBP2Q6ZN18 517 aaPredicted RBP24.69■■□□□ 1.54
BPNT1-204ENST00000463953 CHIC1Q5VXU3 224 aa24.08■■□□□ 1.45
BPNT1-204ENST00000463953 PHF23Q9BUL5 403 aaPredicted RBP21.13■□□□□ 0.97
BPNT1-204ENST00000463953 SENP3Q9H4L4 574 aaPredicted RBP21.06■□□□□ 0.96
BPNT1-204ENST00000463953 PLPPR3Q6T4P5 718 aa19.58■□□□□ 0.72
BPNT1-204ENST00000463953 FOXD1Q16676 465 aa19.51■□□□□ 0.71
BPNT1-204ENST00000463953 ADRA2BP18089 450 aa18.74■□□□□ 0.59
BPNT1-204ENST00000463953 NISCHQ9Y2I1 1504 aa18.73■□□□□ 0.59
BPNT1-204ENST00000463953 PPP6R1Q9UPN7 881 aa18.69■□□□□ 0.58
BPNT1-204ENST00000463953 PIAS4Q8N2W9 510 aaPredicted RBP18.47■□□□□ 0.55
BPNT1-204ENST00000463953 MSH5O43196 834 aa18.08■□□□□ 0.48
BPNT1-204ENST00000463953 PPP4R3CPQ6ZMV5 832 aa17.24■□□□□ 0.35
BPNT1-204ENST00000463953 SCAF1Q9H7N4 1312 aaKnown RBP17.21■□□□□ 0.35
BPNT1-204ENST00000463953 MAPK8IP2Q13387 824 aaPredicted RBP17.01■□□□□ 0.31
BPNT1-204ENST00000463953 NCBP3Q53F19 620 aaKnown RBP16.84■□□□□ 0.29
BPNT1-204ENST00000463953 CNKSR2Q8WXI2 1034 aa16.77■□□□□ 0.28
BPNT1-204ENST00000463953 DMRT2Q9Y5R5 561 aa16.75■□□□□ 0.27
BPNT1-204ENST00000463953 KCNA4P22459 653 aa16.74■□□□□ 0.27
BPNT1-204ENST00000463953 CCDC180Q9P1Z9 1646 aa16.73■□□□□ 0.27
BPNT1-204ENST00000463953 POTEDQ86YR6 584 aa16.55■□□□□ 0.24
BPNT1-204ENST00000463953 ABCC9O60706 1549 aa16.51■□□□□ 0.23
BPNT1-204ENST00000463953 NPM3O75607 178 aaKnown RBP16.5■□□□□ 0.23
BPNT1-204ENST00000463953 RNF216Q9NWF9 866 aaPredicted RBP16.44■□□□□ 0.22
BPNT1-204ENST00000463953 HOXD11P31277 338 aaPredicted RBP16.34■□□□□ 0.21
BPNT1-204ENST00000463953 DCAF8L1A6NGE4 600 aa16.24■□□□□ 0.19
BPNT1-204ENST00000463953 SLC4A1APQ9BWU0 796 aaKnown RBP15.99■□□□□ 0.15
BPNT1-204ENST00000463953 DNAJC5BQ9UF47 199 aa15.87■□□□□ 0.13
BPNT1-204ENST00000463953 RB1CC1Q8TDY2 1594 aa15.81■□□□□ 0.12
BPNT1-204ENST00000463953 NACADO15069 1562 aa15.75■□□□□ 0.11
BPNT1-204ENST00000463953 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.74■□□□□ 0.11
BPNT1-204ENST00000463953 DCAF8L2P0C7V8 631 aa15.73■□□□□ 0.11
BPNT1-204ENST00000463953 MYO15BQ96JP2 1530 aa15.61■□□□□ 0.09
BPNT1-204ENST00000463953 SLC4A2P04920 1241 aa15.55■□□□□ 0.08
BPNT1-204ENST00000463953 UNC13AQ9UPW8 1703 aa15.54■□□□□ 0.08
BPNT1-204ENST00000463953 ZCCHC6Q5VYS8 1495 aaKnown RBP15.54■□□□□ 0.08
BPNT1-204ENST00000463953 EHMT2Q96KQ7 1210 aa15.5■□□□□ 0.07
BPNT1-204ENST00000463953 DCAF1Q9Y4B6 1507 aa15.48■□□□□ 0.07
BPNT1-204ENST00000463953 FOXD4L1Q9NU39 408 aa15.45■□□□□ 0.06
BPNT1-204ENST00000463953 PABPN1Q86U42 306 aaKnown RBP eCLIP15.42■□□□□ 0.06
BPNT1-204ENST00000463953 RNF39Q9H2S5 420 aa15.42■□□□□ 0.06
BPNT1-204ENST00000463953 BICRAQ9NZM4 1560 aa15.37■□□□□ 0.05
BPNT1-204ENST00000463953 U3KPZ7 1027 aaPredicted RBP15.36■□□□□ 0.05
BPNT1-204ENST00000463953 ZBTB22O15209 634 aa15.34■□□□□ 0.05
BPNT1-204ENST00000463953 MYCNP04198 464 aaPredicted RBP15.29■□□□□ 0.04
BPNT1-204ENST00000463953 C1QBPQ07021 282 aaKnown RBP15.27■□□□□ 0.04
BPNT1-204ENST00000463953 SCRIBQ14160 1630 aa15.24■□□□□ 0.03
BPNT1-204ENST00000463953 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.23■□□□□ 0.03
BPNT1-204ENST00000463953 HNRNPUL2Q1KMD3 747 aaKnown RBP15.23■□□□□ 0.03
BPNT1-204ENST00000463953 CSRNP3Q8WYN3 585 aa15.22■□□□□ 0.03
BPNT1-204ENST00000463953 CACNB1Q02641 598 aaPredicted RBP15.2■□□□□ 0.02
BPNT1-204ENST00000463953 SAMD1Q6SPF0 538 aaPredicted RBP15.15■□□□□ 0.02
BPNT1-204ENST00000463953 SHROOM4Q9ULL8 1493 aa15.13■□□□□ 0.01
BPNT1-204ENST00000463953 APLP2Q06481 763 aa15.12■□□□□ 0.01
BPNT1-204ENST00000463953 CAPN15O75808 1086 aa15.03■□□□□ -0
BPNT1-204ENST00000463953 SPINK5Q9NQ38 1064 aaPredicted RBP14.98□□□□□ -0.01
BPNT1-204ENST00000463953 EIF4G1Q04637 1599 aaKnown RBP14.95□□□□□ -0.02
BPNT1-204ENST00000463953 CC2D2AQ9P2K1 1620 aa14.95□□□□□ -0.02
BPNT1-204ENST00000463953 TRHP20396 242 aaPredicted RBP14.94□□□□□ -0.02
BPNT1-204ENST00000463953 ATXN8OSP0DMR3 200 aa14.88□□□□□ -0.03
BPNT1-204ENST00000463953 ZNF219Q9P2Y4 722 aaPredicted RBP14.88□□□□□ -0.03
BPNT1-204ENST00000463953 CECR2Q9BXF3 1484 aa14.84□□□□□ -0.03
BPNT1-204ENST00000463953 ATF5Q9Y2D1 282 aaPredicted RBP14.82□□□□□ -0.04
BPNT1-204ENST00000463953 ABCB7O75027 752 aa14.71□□□□□ -0.05
BPNT1-204ENST00000463953 DSG3P32926 999 aa14.67□□□□□ -0.06
BPNT1-204ENST00000463953 POLA2Q14181 598 aa14.62□□□□□ -0.07
BPNT1-204ENST00000463953 SMARCA4P51532 1647 aa14.57□□□□□ -0.08
BPNT1-204ENST00000463953 NCAPD3P42695 1498 aa14.55□□□□□ -0.08
BPNT1-204ENST00000463953 ATAD2BQ9ULI0 1458 aa14.52□□□□□ -0.08
BPNT1-204ENST00000463953 BAZ1AQ9NRL2 1556 aaPredicted RBP14.51□□□□□ -0.09
BPNT1-204ENST00000463953 SMARCA2P51531 1590 aa14.49□□□□□ -0.09
BPNT1-204ENST00000463953 HMGXB3Q12766 1538 aa14.44□□□□□ -0.1
BPNT1-204ENST00000463953 MROH2BQ7Z745 1585 aa14.43□□□□□ -0.1
BPNT1-204ENST00000463953 PEG3Q9GZU2 1588 aa14.43□□□□□ -0.1
BPNT1-204ENST00000463953 ZBTB12Q9Y330 459 aaPredicted RBP14.39□□□□□ -0.11
BPNT1-204ENST00000463953 BAZ1BQ9UIG0 1483 aaKnown RBP14.38□□□□□ -0.11
BPNT1-204ENST00000463953 FBLN2P98095 1184 aa14.34□□□□□ -0.11
BPNT1-204ENST00000463953 WIZO95785 1651 aa14.3□□□□□ -0.12
BPNT1-204ENST00000463953 NESP48681 1621 aa14.26□□□□□ -0.13
BPNT1-204ENST00000463953 ERCC6Q03468 1493 aa14.22□□□□□ -0.13
BPNT1-204ENST00000463953 RSF1Q96T23 1441 aaPredicted RBP14.2□□□□□ -0.14
BPNT1-204ENST00000463953 LAMC3Q9Y6N6 1575 aa14.19□□□□□ -0.14
BPNT1-204ENST00000463953 MKRN4PQ13434 485 aaPredicted RBP14.16□□□□□ -0.14
BPNT1-204ENST00000463953 CUX2O14529 1486 aa14.14□□□□□ -0.15
BPNT1-204ENST00000463953 CADPSQ9ULU8 1353 aa14.11□□□□□ -0.15
BPNT1-204ENST00000463953 OSCARQ8IYS5 282 aa14.11□□□□□ -0.15
BPNT1-204ENST00000463953 KIF21AQ7Z4S6 1674 aa14.1□□□□□ -0.15
BPNT1-204ENST00000463953 TOP2AP11388 1531 aaKnown RBP14.09□□□□□ -0.15
BPNT1-204ENST00000463953 PDS5BQ9NTI5 1447 aa14.08□□□□□ -0.15
BPNT1-204ENST00000463953 THOC2Q8NI27 1593 aaKnown RBP14.06□□□□□ -0.16
BPNT1-204ENST00000463953 RBM42Q9BTD8 480 aaKnown RBP14.05□□□□□ -0.16
BPNT1-204ENST00000463953 CFTRP13569 1480 aa13.99□□□□□ -0.17
BPNT1-204ENST00000463953 SPDYE2BA6NHP3 402 aa13.96□□□□□ -0.17
BPNT1-204ENST00000463953 SPDYE6P0CI01 402 aa13.96□□□□□ -0.17
BPNT1-204ENST00000463953 SPDYE2Q495Y8 402 aa13.96□□□□□ -0.17
BPNT1-204ENST00000463953 CCDC88BA6NC98 1476 aa13.95□□□□□ -0.18
BPNT1-204ENST00000463953 ZNF692Q9BU19 519 aaPredicted RBP13.94□□□□□ -0.18
BPNT1-204ENST00000463953 DNAJC5Q9H3Z4 198 aa13.94□□□□□ -0.18
BPNT1-204ENST00000463953 FANCD2Q9BXW9 1451 aa13.93□□□□□ -0.18
BPNT1-204ENST00000463953 MRC2Q9UBG0 1479 aa13.93□□□□□ -0.18
BPNT1-204ENST00000463953 CEP164Q9UPV0 1460 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms