RNA–Protein interactions for RNA: ENST00000463058.5

HHLA3-204, Transcript of HERV-H LTR-associating 3, humanhuman

TSL 2

Gene HHLA3, Length 832 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3-204ENST00000463058 AEBP2Q6ZN18 517 aaPredicted RBP21.22■□□□□ 0.99
HHLA3-204ENST00000463058 CHIC1Q5VXU3 224 aa21.08■□□□□ 0.97
HHLA3-204ENST00000463058 PHF23Q9BUL5 403 aaPredicted RBP18.69■□□□□ 0.58
HHLA3-204ENST00000463058 SENP3Q9H4L4 574 aaPredicted RBP17.74■□□□□ 0.43
HHLA3-204ENST00000463058 PLPPR3Q6T4P5 718 aa17.25■□□□□ 0.35
HHLA3-204ENST00000463058 FOXD1Q16676 465 aa16.51■□□□□ 0.23
HHLA3-204ENST00000463058 PPP6R1Q9UPN7 881 aa16.33■□□□□ 0.2
HHLA3-204ENST00000463058 ADRA2BP18089 450 aa16.31■□□□□ 0.2
HHLA3-204ENST00000463058 NISCHQ9Y2I1 1504 aa16.14■□□□□ 0.17
HHLA3-204ENST00000463058 POTEDQ86YR6 584 aa16.05■□□□□ 0.16
HHLA3-204ENST00000463058 PIAS4Q8N2W9 510 aaPredicted RBP15.62■□□□□ 0.09
HHLA3-204ENST00000463058 KCNA4P22459 653 aa15.58■□□□□ 0.08
HHLA3-204ENST00000463058 PPP4R3CPQ6ZMV5 832 aa15.31■□□□□ 0.04
HHLA3-204ENST00000463058 MSH5O43196 834 aa15.21■□□□□ 0.03
HHLA3-204ENST00000463058 EHMT2Q96KQ7 1210 aa15□□□□□ -0.01
HHLA3-204ENST00000463058 NCBP3Q53F19 620 aaKnown RBP14.92□□□□□ -0.02
HHLA3-204ENST00000463058 NPM3O75607 178 aaKnown RBP14.87□□□□□ -0.03
HHLA3-204ENST00000463058 SLC4A1APQ9BWU0 796 aaKnown RBP14.83□□□□□ -0.04
HHLA3-204ENST00000463058 CNKSR2Q8WXI2 1034 aa14.74□□□□□ -0.05
HHLA3-204ENST00000463058 SCAF1Q9H7N4 1312 aaKnown RBP14.69□□□□□ -0.06
HHLA3-204ENST00000463058 MAPK8IP2Q13387 824 aaPredicted RBP14.66□□□□□ -0.06
HHLA3-204ENST00000463058 CSRNP3Q8WYN3 585 aa14.66□□□□□ -0.06
HHLA3-204ENST00000463058 ABCC9O60706 1549 aa14.54□□□□□ -0.08
HHLA3-204ENST00000463058 ZBTB22O15209 634 aa14.42□□□□□ -0.1
HHLA3-204ENST00000463058 DNAJC5BQ9UF47 199 aa14.36□□□□□ -0.11
HHLA3-204ENST00000463058 CCDC180Q9P1Z9 1646 aa14.36□□□□□ -0.11
HHLA3-204ENST00000463058 RNF216Q9NWF9 866 aaPredicted RBP14.34□□□□□ -0.11
HHLA3-204ENST00000463058 DMRT2Q9Y5R5 561 aa14.3□□□□□ -0.12
HHLA3-204ENST00000463058 HOXD11P31277 338 aaPredicted RBP14.2□□□□□ -0.14
HHLA3-204ENST00000463058 FOXD4L1Q9NU39 408 aa14.11□□□□□ -0.15
HHLA3-204ENST00000463058 SLC4A2P04920 1241 aa13.98□□□□□ -0.17
HHLA3-204ENST00000463058 RB1CC1Q8TDY2 1594 aa13.75□□□□□ -0.21
HHLA3-204ENST00000463058 DCAF8L2P0C7V8 631 aa13.67□□□□□ -0.22
HHLA3-204ENST00000463058 MYCNP04198 464 aaPredicted RBP13.65□□□□□ -0.22
HHLA3-204ENST00000463058 NACADO15069 1562 aa13.62□□□□□ -0.23
HHLA3-204ENST00000463058 PABPN1Q86U42 306 aaKnown RBP eCLIP13.57□□□□□ -0.24
HHLA3-204ENST00000463058 DCAF8L1A6NGE4 600 aa13.55□□□□□ -0.24
HHLA3-204ENST00000463058 ATXN8OSP0DMR3 200 aa13.54□□□□□ -0.24
HHLA3-204ENST00000463058 CACNB1Q02641 598 aaPredicted RBP13.5□□□□□ -0.25
HHLA3-204ENST00000463058 ZCCHC6Q5VYS8 1495 aaKnown RBP13.46□□□□□ -0.25
HHLA3-204ENST00000463058 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.43□□□□□ -0.26
HHLA3-204ENST00000463058 UNC13AQ9UPW8 1703 aa13.43□□□□□ -0.26
HHLA3-204ENST00000463058 ATF5Q9Y2D1 282 aaPredicted RBP13.41□□□□□ -0.26
HHLA3-204ENST00000463058 U3KPZ7 1027 aaPredicted RBP13.41□□□□□ -0.26
HHLA3-204ENST00000463058 MYO15BQ96JP2 1530 aa13.39□□□□□ -0.27
HHLA3-204ENST00000463058 BICRAQ9NZM4 1560 aa13.37□□□□□ -0.27
HHLA3-204ENST00000463058 DCAF1Q9Y4B6 1507 aa13.3□□□□□ -0.28
HHLA3-204ENST00000463058 SAMD1Q6SPF0 538 aaPredicted RBP13.22□□□□□ -0.29
HHLA3-204ENST00000463058 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.19□□□□□ -0.3
HHLA3-204ENST00000463058 HNRNPUL2Q1KMD3 747 aaKnown RBP13.19□□□□□ -0.3
HHLA3-204ENST00000463058 SCRIBQ14160 1630 aa13.15□□□□□ -0.3
HHLA3-204ENST00000463058 FKBP8Q14318 412 aa13.15□□□□□ -0.3
HHLA3-204ENST00000463058 SHROOM4Q9ULL8 1493 aa13.12□□□□□ -0.31
HHLA3-204ENST00000463058 CC2D2AQ9P2K1 1620 aa13.1□□□□□ -0.31
HHLA3-204ENST00000463058 CECR2Q9BXF3 1484 aa13.1□□□□□ -0.31
HHLA3-204ENST00000463058 EIF4G1Q04637 1599 aaKnown RBP13.05□□□□□ -0.32
HHLA3-204ENST00000463058 ZNF219Q9P2Y4 722 aaPredicted RBP13.01□□□□□ -0.33
HHLA3-204ENST00000463058 RNF39Q9H2S5 420 aa12.96□□□□□ -0.33
HHLA3-204ENST00000463058 APLP2Q06481 763 aa12.9□□□□□ -0.34
HHLA3-204ENST00000463058 SPINK5Q9NQ38 1064 aaPredicted RBP12.89□□□□□ -0.35
HHLA3-204ENST00000463058 RTN4Q9NQC3 1192 aaKnown RBP12.89□□□□□ -0.35
HHLA3-204ENST00000463058 MKRN4PQ13434 485 aaPredicted RBP12.84□□□□□ -0.35
HHLA3-204ENST00000463058 TRHP20396 242 aaPredicted RBP12.78□□□□□ -0.36
HHLA3-204ENST00000463058 AMER1Q5JTC6 1135 aaPredicted RBP12.77□□□□□ -0.37
HHLA3-204ENST00000463058 CAPN15O75808 1086 aa12.7□□□□□ -0.38
HHLA3-204ENST00000463058 C1QBPQ07021 282 aaKnown RBP12.69□□□□□ -0.38
HHLA3-204ENST00000463058 POLA2Q14181 598 aa12.69□□□□□ -0.38
HHLA3-204ENST00000463058 DNAJC5Q9H3Z4 198 aa12.67□□□□□ -0.38
HHLA3-204ENST00000463058 SPDYE4A6NLX3 237 aa12.65□□□□□ -0.38
HHLA3-204ENST00000463058 PROM2Q8N271 834 aa12.62□□□□□ -0.39
HHLA3-204ENST00000463058 NCAPD3P42695 1498 aa12.6□□□□□ -0.39
HHLA3-204ENST00000463058 ABCB7O75027 752 aa12.58□□□□□ -0.4
HHLA3-204ENST00000463058 FBLN2P98095 1184 aa12.58□□□□□ -0.4
HHLA3-204ENST00000463058 ATAD2BQ9ULI0 1458 aa12.57□□□□□ -0.4
HHLA3-204ENST00000463058 ERCC6Q03468 1493 aa12.54□□□□□ -0.4
HHLA3-204ENST00000463058 CUX2O14529 1486 aa12.52□□□□□ -0.41
HHLA3-204ENST00000463058 SMARCA4P51532 1647 aa12.51□□□□□ -0.41
HHLA3-204ENST00000463058 SMARCA2P51531 1590 aa12.49□□□□□ -0.41
HHLA3-204ENST00000463058 BAZ1AQ9NRL2 1556 aaPredicted RBP12.49□□□□□ -0.41
HHLA3-204ENST00000463058 NESP48681 1621 aa12.48□□□□□ -0.41
HHLA3-204ENST00000463058 HMGXB3Q12766 1538 aa12.47□□□□□ -0.41
HHLA3-204ENST00000463058 DSG3P32926 999 aa12.46□□□□□ -0.41
HHLA3-204ENST00000463058 MROH2BQ7Z745 1585 aa12.46□□□□□ -0.42
HHLA3-204ENST00000463058 BAZ1BQ9UIG0 1483 aaKnown RBP12.43□□□□□ -0.42
HHLA3-204ENST00000463058 POTEHQ6S545 545 aa12.43□□□□□ -0.42
HHLA3-204ENST00000463058 FBXO3Q9UK99 471 aa12.42□□□□□ -0.42
HHLA3-204ENST00000463058 ZBTB12Q9Y330 459 aaPredicted RBP12.42□□□□□ -0.42
HHLA3-204ENST00000463058 RSF1Q96T23 1441 aaPredicted RBP12.42□□□□□ -0.42
HHLA3-204ENST00000463058 SUPT5HO00267 1087 aaKnown RBP12.41□□□□□ -0.42
HHLA3-204ENST00000463058 VASPP50552 380 aaPredicted RBP12.37□□□□□ -0.43
HHLA3-204ENST00000463058 PEG3Q9GZU2 1588 aa12.37□□□□□ -0.43
HHLA3-204ENST00000463058 SLC24A1O60721 1099 aa12.34□□□□□ -0.43
HHLA3-204ENST00000463058 THOC2Q8NI27 1593 aaKnown RBP12.31□□□□□ -0.44
HHLA3-204ENST00000463058 LAMC3Q9Y6N6 1575 aa12.3□□□□□ -0.44
HHLA3-204ENST00000463058 OSCARQ8IYS5 282 aa12.3□□□□□ -0.44
HHLA3-204ENST00000463058 IFNLR1Q8IU57 520 aaPredicted RBP12.29□□□□□ -0.44
HHLA3-204ENST00000463058 WIZO95785 1651 aa12.29□□□□□ -0.44
HHLA3-204ENST00000463058 PDS5BQ9NTI5 1447 aa12.27□□□□□ -0.45
HHLA3-204ENST00000463058 KIF21AQ7Z4S6 1674 aa12.26□□□□□ -0.45
HHLA3-204ENST00000463058 SSUH2Q9Y2M2 353 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 191.4 ms