RNA–Protein interactions for RNA: ENST00000462312.5

KRT23-203, Transcript of keratin 23, humanhuman

TSL 1 (best)

Gene KRT23, Length 1,462 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT23-203ENST00000462312 AEBP2Q6ZN18 517 aaPredicted RBP26.2■■□□□ 1.78
KRT23-203ENST00000462312 CHIC1Q5VXU3 224 aa25.78■■□□□ 1.72
KRT23-203ENST00000462312 PHF23Q9BUL5 403 aaPredicted RBP22.62■■□□□ 1.21
KRT23-203ENST00000462312 SENP3Q9H4L4 574 aaPredicted RBP22.3■■□□□ 1.16
KRT23-203ENST00000462312 PLPPR3Q6T4P5 718 aa21■□□□□ 0.95
KRT23-203ENST00000462312 FOXD1Q16676 465 aa20.61■□□□□ 0.89
KRT23-203ENST00000462312 PPP6R1Q9UPN7 881 aa19.88■□□□□ 0.77
KRT23-203ENST00000462312 ADRA2BP18089 450 aa19.86■□□□□ 0.77
KRT23-203ENST00000462312 PIAS4Q8N2W9 510 aaPredicted RBP19.48■□□□□ 0.71
KRT23-203ENST00000462312 MSH5O43196 834 aa19.03■□□□□ 0.64
KRT23-203ENST00000462312 PPP4R3CPQ6ZMV5 832 aa18.47■□□□□ 0.55
KRT23-203ENST00000462312 NISCHQ9Y2I1 1504 aa18.3■□□□□ 0.52
KRT23-203ENST00000462312 SCAF1Q9H7N4 1312 aaKnown RBP18.27■□□□□ 0.52
KRT23-203ENST00000462312 KCNA4P22459 653 aa18.16■□□□□ 0.5
KRT23-203ENST00000462312 NCBP3Q53F19 620 aaKnown RBP18.07■□□□□ 0.48
KRT23-203ENST00000462312 CNKSR2Q8WXI2 1034 aa17.97■□□□□ 0.47
KRT23-203ENST00000462312 MAPK8IP2Q13387 824 aaPredicted RBP17.95■□□□□ 0.46
KRT23-203ENST00000462312 DMRT2Q9Y5R5 561 aa17.81■□□□□ 0.44
KRT23-203ENST00000462312 NPM3O75607 178 aaKnown RBP17.76■□□□□ 0.43
KRT23-203ENST00000462312 RNF216Q9NWF9 866 aaPredicted RBP17.61■□□□□ 0.41
KRT23-203ENST00000462312 HOXD11P31277 338 aaPredicted RBP17.51■□□□□ 0.39
KRT23-203ENST00000462312 DNAJC5BQ9UF47 199 aa17.41■□□□□ 0.38
KRT23-203ENST00000462312 SLC4A1APQ9BWU0 796 aaKnown RBP17.33■□□□□ 0.37
KRT23-203ENST00000462312 POTEDQ86YR6 584 aa17.05■□□□□ 0.32
KRT23-203ENST00000462312 ABCC9O60706 1549 aa16.98■□□□□ 0.31
KRT23-203ENST00000462312 DCAF8L1A6NGE4 600 aa16.9■□□□□ 0.3
KRT23-203ENST00000462312 EHMT2Q96KQ7 1210 aa16.9■□□□□ 0.3
KRT23-203ENST00000462312 SLC4A2P04920 1241 aa16.73■□□□□ 0.27
KRT23-203ENST00000462312 FOXD4L1Q9NU39 408 aa16.73■□□□□ 0.27
KRT23-203ENST00000462312 ZBTB22O15209 634 aa16.71■□□□□ 0.27
KRT23-203ENST00000462312 CSRNP3Q8WYN3 585 aa16.71■□□□□ 0.27
KRT23-203ENST00000462312 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.6■□□□□ 0.25
KRT23-203ENST00000462312 CCDC180Q9P1Z9 1646 aa16.6■□□□□ 0.25
KRT23-203ENST00000462312 MYCNP04198 464 aaPredicted RBP16.47■□□□□ 0.23
KRT23-203ENST00000462312 U3KPZ7 1027 aaPredicted RBP16.38■□□□□ 0.21
KRT23-203ENST00000462312 RNF39Q9H2S5 420 aa16.29■□□□□ 0.2
KRT23-203ENST00000462312 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.29■□□□□ 0.2
KRT23-203ENST00000462312 HNRNPUL2Q1KMD3 747 aaKnown RBP16.29■□□□□ 0.2
KRT23-203ENST00000462312 SAMD1Q6SPF0 538 aaPredicted RBP16.22■□□□□ 0.19
KRT23-203ENST00000462312 ATXN8OSP0DMR3 200 aa16.2■□□□□ 0.18
KRT23-203ENST00000462312 C1QBPQ07021 282 aaKnown RBP16.14■□□□□ 0.17
KRT23-203ENST00000462312 APLP2Q06481 763 aa16.1■□□□□ 0.17
KRT23-203ENST00000462312 RB1CC1Q8TDY2 1594 aa15.99■□□□□ 0.15
KRT23-203ENST00000462312 ATF5Q9Y2D1 282 aaPredicted RBP15.91■□□□□ 0.14
KRT23-203ENST00000462312 SPINK5Q9NQ38 1064 aaPredicted RBP15.84■□□□□ 0.13
KRT23-203ENST00000462312 ZNF219Q9P2Y4 722 aaPredicted RBP15.83■□□□□ 0.12
KRT23-203ENST00000462312 NACADO15069 1562 aa15.77■□□□□ 0.12
KRT23-203ENST00000462312 CAPN15O75808 1086 aa15.77■□□□□ 0.11
KRT23-203ENST00000462312 PABPN1Q86U42 306 aaKnown RBP eCLIP15.76■□□□□ 0.11
KRT23-203ENST00000462312 CACNB1Q02641 598 aaPredicted RBP15.72■□□□□ 0.11
KRT23-203ENST00000462312 TRHP20396 242 aaPredicted RBP15.71■□□□□ 0.1
KRT23-203ENST00000462312 DCAF8L2P0C7V8 631 aa15.7■□□□□ 0.1
KRT23-203ENST00000462312 UNC13AQ9UPW8 1703 aa15.63■□□□□ 0.09
KRT23-203ENST00000462312 DSG3P32926 999 aa15.52■□□□□ 0.08
KRT23-203ENST00000462312 BICRAQ9NZM4 1560 aa15.51■□□□□ 0.07
KRT23-203ENST00000462312 POLA2Q14181 598 aa15.5■□□□□ 0.07
KRT23-203ENST00000462312 ABCB7O75027 752 aa15.46■□□□□ 0.06
KRT23-203ENST00000462312 MYO15BQ96JP2 1530 aa15.4■□□□□ 0.06
KRT23-203ENST00000462312 ZBTB12Q9Y330 459 aaPredicted RBP15.39■□□□□ 0.05
KRT23-203ENST00000462312 CECR2Q9BXF3 1484 aa15.33■□□□□ 0.05
KRT23-203ENST00000462312 FBLN2P98095 1184 aa15.31■□□□□ 0.04
KRT23-203ENST00000462312 CC2D2AQ9P2K1 1620 aa15.31■□□□□ 0.04
KRT23-203ENST00000462312 MKRN4PQ13434 485 aaPredicted RBP15.27■□□□□ 0.03
KRT23-203ENST00000462312 SHROOM4Q9ULL8 1493 aa15.26■□□□□ 0.03
KRT23-203ENST00000462312 DNAJC5Q9H3Z4 198 aa15.18■□□□□ 0.02
KRT23-203ENST00000462312 EIF4G1Q04637 1599 aaKnown RBP15.18■□□□□ 0.02
KRT23-203ENST00000462312 SCRIBQ14160 1630 aa15.13■□□□□ 0.01
KRT23-203ENST00000462312 ZCCHC6Q5VYS8 1495 aaKnown RBP15.09■□□□□ 0.01
KRT23-203ENST00000462312 FKBP8Q14318 412 aa15.08■□□□□ 0.01
KRT23-203ENST00000462312 DCAF1Q9Y4B6 1507 aa15.08■□□□□ 0
KRT23-203ENST00000462312 OSCARQ8IYS5 282 aa14.99□□□□□ -0.01
KRT23-203ENST00000462312 SPDYE4A6NLX3 237 aa14.98□□□□□ -0.01
KRT23-203ENST00000462312 SPDYE2BA6NHP3 402 aa14.95□□□□□ -0.02
KRT23-203ENST00000462312 SPDYE6P0CI01 402 aa14.95□□□□□ -0.02
KRT23-203ENST00000462312 SPDYE2Q495Y8 402 aa14.95□□□□□ -0.02
KRT23-203ENST00000462312 PROM2Q8N271 834 aa14.86□□□□□ -0.03
KRT23-203ENST00000462312 RBM42Q9BTD8 480 aaKnown RBP14.86□□□□□ -0.03
KRT23-203ENST00000462312 SSUH2Q9Y2M2 353 aa14.85□□□□□ -0.03
KRT23-203ENST00000462312 ZNF692Q9BU19 519 aaPredicted RBP14.82□□□□□ -0.04
KRT23-203ENST00000462312 CUX2O14529 1486 aa14.77□□□□□ -0.04
KRT23-203ENST00000462312 ERCC6Q03468 1493 aa14.72□□□□□ -0.05
KRT23-203ENST00000462312 AKT1S1Q96B36 256 aa14.68□□□□□ -0.06
KRT23-203ENST00000462312 FBXO3Q9UK99 471 aa14.6□□□□□ -0.07
KRT23-203ENST00000462312 NCAPD3P42695 1498 aa14.55□□□□□ -0.08
KRT23-203ENST00000462312 STAG3Q9UJ98 1225 aa14.5□□□□□ -0.09
KRT23-203ENST00000462312 REM2Q8IYK8 340 aaPredicted RBP14.48□□□□□ -0.09
KRT23-203ENST00000462312 NESP48681 1621 aa14.47□□□□□ -0.09
KRT23-203ENST00000462312 SPDYE1Q8NFV5 336 aaPredicted RBP14.46□□□□□ -0.09
KRT23-203ENST00000462312 ATAD2BQ9ULI0 1458 aa14.46□□□□□ -0.09
KRT23-203ENST00000462312 SMARCA2P51531 1590 aa14.42□□□□□ -0.1
KRT23-203ENST00000462312 TRIM41Q8WV44 630 aa14.42□□□□□ -0.1
KRT23-203ENST00000462312 HMGXB3Q12766 1538 aa14.42□□□□□ -0.1
KRT23-203ENST00000462312 THOC2Q8NI27 1593 aaKnown RBP14.39□□□□□ -0.11
KRT23-203ENST00000462312 VASPP50552 380 aaPredicted RBP14.38□□□□□ -0.11
KRT23-203ENST00000462312 SMARCA4P51532 1647 aa14.37□□□□□ -0.11
KRT23-203ENST00000462312 BAZ1BQ9UIG0 1483 aaKnown RBP14.34□□□□□ -0.11
KRT23-203ENST00000462312 PITPNM1O00562 1244 aa14.32□□□□□ -0.12
KRT23-203ENST00000462312 LAMC3Q9Y6N6 1575 aa14.3□□□□□ -0.12
KRT23-203ENST00000462312 CLEC11AQ9Y240 323 aa14.29□□□□□ -0.12
KRT23-203ENST00000462312 KIF21AQ7Z4S6 1674 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms