RNA–Protein interactions for RNA: ENST00000456904.3

AP001442.1-202, humanhuman

TSL 3

Gene AP001442.1, Length 912 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001442.1-202ENST00000456904 AEBP2Q6ZN18 517 aaPredicted RBP24.52■■□□□ 1.52
AP001442.1-202ENST00000456904 CHIC1Q5VXU3 224 aa23.26■■□□□ 1.31
AP001442.1-202ENST00000456904 SENP3Q9H4L4 574 aaPredicted RBP20.99■□□□□ 0.95
AP001442.1-202ENST00000456904 PHF23Q9BUL5 403 aaPredicted RBP20.7■□□□□ 0.9
AP001442.1-202ENST00000456904 FOXD1Q16676 465 aa19.54■□□□□ 0.72
AP001442.1-202ENST00000456904 PLPPR3Q6T4P5 718 aa18.59■□□□□ 0.57
AP001442.1-202ENST00000456904 MSH5O43196 834 aa18.36■□□□□ 0.53
AP001442.1-202ENST00000456904 PIAS4Q8N2W9 510 aaPredicted RBP18.27■□□□□ 0.52
AP001442.1-202ENST00000456904 PPP6R1Q9UPN7 881 aa18.19■□□□□ 0.5
AP001442.1-202ENST00000456904 ADRA2BP18089 450 aa18.15■□□□□ 0.5
AP001442.1-202ENST00000456904 POTEDQ86YR6 584 aa17.99■□□□□ 0.47
AP001442.1-202ENST00000456904 MAPK8IP2Q13387 824 aaPredicted RBP16.69■□□□□ 0.26
AP001442.1-202ENST00000456904 SCAF1Q9H7N4 1312 aaKnown RBP16.69■□□□□ 0.26
AP001442.1-202ENST00000456904 DMRT2Q9Y5R5 561 aa16.61■□□□□ 0.25
AP001442.1-202ENST00000456904 PPP4R3CPQ6ZMV5 832 aa16.27■□□□□ 0.2
AP001442.1-202ENST00000456904 NISCHQ9Y2I1 1504 aa16.21■□□□□ 0.19
AP001442.1-202ENST00000456904 CNKSR2Q8WXI2 1034 aa16■□□□□ 0.15
AP001442.1-202ENST00000456904 DCAF8L1A6NGE4 600 aa15.99■□□□□ 0.15
AP001442.1-202ENST00000456904 HOXD11P31277 338 aaPredicted RBP15.98■□□□□ 0.15
AP001442.1-202ENST00000456904 RNF216Q9NWF9 866 aaPredicted RBP15.86■□□□□ 0.13
AP001442.1-202ENST00000456904 CACNB1Q02641 598 aaPredicted RBP15.8■□□□□ 0.12
AP001442.1-202ENST00000456904 NCBP3Q53F19 620 aaKnown RBP15.67■□□□□ 0.1
AP001442.1-202ENST00000456904 ABCC9O60706 1549 aa15.66■□□□□ 0.1
AP001442.1-202ENST00000456904 RNF39Q9H2S5 420 aa15.62■□□□□ 0.09
AP001442.1-202ENST00000456904 DNAJC5BQ9UF47 199 aa15.46■□□□□ 0.07
AP001442.1-202ENST00000456904 C1QBPQ07021 282 aaKnown RBP15.42■□□□□ 0.06
AP001442.1-202ENST00000456904 NPM3O75607 178 aaKnown RBP15.38■□□□□ 0.05
AP001442.1-202ENST00000456904 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.26■□□□□ 0.03
AP001442.1-202ENST00000456904 KCNA4P22459 653 aa15.02■□□□□ -0
AP001442.1-202ENST00000456904 U3KPZ7 1027 aaPredicted RBP14.89□□□□□ -0.03
AP001442.1-202ENST00000456904 CCDC180Q9P1Z9 1646 aa14.86□□□□□ -0.03
AP001442.1-202ENST00000456904 CAPN15O75808 1086 aa14.71□□□□□ -0.05
AP001442.1-202ENST00000456904 SLC4A2P04920 1241 aa14.69□□□□□ -0.06
AP001442.1-202ENST00000456904 SPINK5Q9NQ38 1064 aaPredicted RBP14.69□□□□□ -0.06
AP001442.1-202ENST00000456904 DNAJC5Q9H3Z4 198 aa14.66□□□□□ -0.06
AP001442.1-202ENST00000456904 DSG3P32926 999 aa14.61□□□□□ -0.07
AP001442.1-202ENST00000456904 APLP2Q06481 763 aa14.55□□□□□ -0.08
AP001442.1-202ENST00000456904 RB1CC1Q8TDY2 1594 aa14.54□□□□□ -0.08
AP001442.1-202ENST00000456904 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.52□□□□□ -0.09
AP001442.1-202ENST00000456904 HNRNPUL2Q1KMD3 747 aaKnown RBP14.52□□□□□ -0.09
AP001442.1-202ENST00000456904 PABPN1Q86U42 306 aaKnown RBP eCLIP14.5□□□□□ -0.09
AP001442.1-202ENST00000456904 TRHP20396 242 aaPredicted RBP14.46□□□□□ -0.09
AP001442.1-202ENST00000456904 ZNF219Q9P2Y4 722 aaPredicted RBP14.44□□□□□ -0.1
AP001442.1-202ENST00000456904 SAMD1Q6SPF0 538 aaPredicted RBP14.41□□□□□ -0.1
AP001442.1-202ENST00000456904 ABCB7O75027 752 aa14.34□□□□□ -0.11
AP001442.1-202ENST00000456904 MYCNP04198 464 aaPredicted RBP14.25□□□□□ -0.13
AP001442.1-202ENST00000456904 NACADO15069 1562 aa14.24□□□□□ -0.13
AP001442.1-202ENST00000456904 UNC13AQ9UPW8 1703 aa14.22□□□□□ -0.13
AP001442.1-202ENST00000456904 SLC4A1APQ9BWU0 796 aaKnown RBP14.2□□□□□ -0.14
AP001442.1-202ENST00000456904 DCAF8L2P0C7V8 631 aa14.17□□□□□ -0.14
AP001442.1-202ENST00000456904 CECR2Q9BXF3 1484 aa14.17□□□□□ -0.14
AP001442.1-202ENST00000456904 BICRAQ9NZM4 1560 aa14.11□□□□□ -0.15
AP001442.1-202ENST00000456904 POTEHQ6S545 545 aa14.1□□□□□ -0.15
AP001442.1-202ENST00000456904 CC2D2AQ9P2K1 1620 aa14.08□□□□□ -0.15
AP001442.1-202ENST00000456904 FOXD4L1Q9NU39 408 aa14.07□□□□□ -0.16
AP001442.1-202ENST00000456904 POLA2Q14181 598 aa14.05□□□□□ -0.16
AP001442.1-202ENST00000456904 RBM42Q9BTD8 480 aaKnown RBP13.99□□□□□ -0.17
AP001442.1-202ENST00000456904 ATF5Q9Y2D1 282 aaPredicted RBP13.88□□□□□ -0.19
AP001442.1-202ENST00000456904 EIF4G1Q04637 1599 aaKnown RBP13.85□□□□□ -0.19
AP001442.1-202ENST00000456904 SHROOM4Q9ULL8 1493 aa13.81□□□□□ -0.2
AP001442.1-202ENST00000456904 ZBTB12Q9Y330 459 aaPredicted RBP13.79□□□□□ -0.2
AP001442.1-202ENST00000456904 TRIM41Q8WV44 630 aa13.78□□□□□ -0.2
AP001442.1-202ENST00000456904 ZBTB22O15209 634 aa13.77□□□□□ -0.21
AP001442.1-202ENST00000456904 CUX2O14529 1486 aa13.76□□□□□ -0.21
AP001442.1-202ENST00000456904 MYO15BQ96JP2 1530 aa13.74□□□□□ -0.21
AP001442.1-202ENST00000456904 CHRDL2Q6WN34 429 aa13.68□□□□□ -0.22
AP001442.1-202ENST00000456904 ATXN8OSP0DMR3 200 aa13.65□□□□□ -0.22
AP001442.1-202ENST00000456904 AKT1S1Q96B36 256 aa13.64□□□□□ -0.23
AP001442.1-202ENST00000456904 ERCC6Q03468 1493 aa13.59□□□□□ -0.23
AP001442.1-202ENST00000456904 OSCARQ8IYS5 282 aa13.58□□□□□ -0.24
AP001442.1-202ENST00000456904 SCRIBQ14160 1630 aa13.53□□□□□ -0.24
AP001442.1-202ENST00000456904 REM2Q8IYK8 340 aaPredicted RBP13.49□□□□□ -0.25
AP001442.1-202ENST00000456904 FBLN2P98095 1184 aa13.43□□□□□ -0.26
AP001442.1-202ENST00000456904 PITPNM1O00562 1244 aa13.34□□□□□ -0.27
AP001442.1-202ENST00000456904 SPDYE2BA6NHP3 402 aa13.33□□□□□ -0.28
AP001442.1-202ENST00000456904 SPDYE6P0CI01 402 aa13.33□□□□□ -0.28
AP001442.1-202ENST00000456904 SPDYE2Q495Y8 402 aa13.33□□□□□ -0.28
AP001442.1-202ENST00000456904 PIP4P2Q8N4L2 257 aa13.32□□□□□ -0.28
AP001442.1-202ENST00000456904 DCAF1Q9Y4B6 1507 aa13.3□□□□□ -0.28
AP001442.1-202ENST00000456904 ZCCHC6Q5VYS8 1495 aaKnown RBP13.26□□□□□ -0.29
AP001442.1-202ENST00000456904 FXR2P51116 673 aaKnown RBP eCLIP13.24□□□□□ -0.29
AP001442.1-202ENST00000456904 MKRN4PQ13434 485 aaPredicted RBP13.23□□□□□ -0.29
AP001442.1-202ENST00000456904 NESP48681 1621 aa13.22□□□□□ -0.29
AP001442.1-202ENST00000456904 THOC2Q8NI27 1593 aaKnown RBP13.2□□□□□ -0.3
AP001442.1-202ENST00000456904 SP7Q8TDD2 431 aaPredicted RBP13.19□□□□□ -0.3
AP001442.1-202ENST00000456904 ZNF692Q9BU19 519 aaPredicted RBP13.18□□□□□ -0.3
AP001442.1-202ENST00000456904 NCAPD3P42695 1498 aa13.16□□□□□ -0.3
AP001442.1-202ENST00000456904 HAX1O00165 279 aa13.14□□□□□ -0.31
AP001442.1-202ENST00000456904 SPDYE1Q8NFV5 336 aaPredicted RBP13.13□□□□□ -0.31
AP001442.1-202ENST00000456904 CLEC11AQ9Y240 323 aa13.12□□□□□ -0.31
AP001442.1-202ENST00000456904 SSUH2Q9Y2M2 353 aa13.12□□□□□ -0.31
AP001442.1-202ENST00000456904 CSRNP3Q8WYN3 585 aa13.11□□□□□ -0.31
AP001442.1-202ENST00000456904 SMARCA2P51531 1590 aa13.11□□□□□ -0.31
AP001442.1-202ENST00000456904 BAZ1AQ9NRL2 1556 aaPredicted RBP13.03□□□□□ -0.32
AP001442.1-202ENST00000456904 KIF21AQ7Z4S6 1674 aa13.02□□□□□ -0.32
AP001442.1-202ENST00000456904 PRKAR2AP13861 404 aaKnown RBP13.01□□□□□ -0.33
AP001442.1-202ENST00000456904 ATAD2BQ9ULI0 1458 aa13.01□□□□□ -0.33
AP001442.1-202ENST00000456904 LAMC3Q9Y6N6 1575 aa12.98□□□□□ -0.33
AP001442.1-202ENST00000456904 HMGXB3Q12766 1538 aa12.97□□□□□ -0.33
AP001442.1-202ENST00000456904 PDS5BQ9NTI5 1447 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 165.9 ms