RNA–Protein interactions for RNA: ENST00000455953.1

NCBP2-208, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 5

Gene NCBP2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-208ENST00000455953 AEBP2Q6ZN18 517 aaPredicted RBP24.81■■□□□ 1.56
NCBP2-208ENST00000455953 CHIC1Q5VXU3 224 aa23.87■■□□□ 1.41
NCBP2-208ENST00000455953 PHF23Q9BUL5 403 aaPredicted RBP21.05■□□□□ 0.96
NCBP2-208ENST00000455953 SENP3Q9H4L4 574 aaPredicted RBP20.96■□□□□ 0.95
NCBP2-208ENST00000455953 FOXD1Q16676 465 aa19.58■□□□□ 0.72
NCBP2-208ENST00000455953 PLPPR3Q6T4P5 718 aa19.22■□□□□ 0.67
NCBP2-208ENST00000455953 PPP6R1Q9UPN7 881 aa18.69■□□□□ 0.58
NCBP2-208ENST00000455953 ADRA2BP18089 450 aa18.63■□□□□ 0.57
NCBP2-208ENST00000455953 PIAS4Q8N2W9 510 aaPredicted RBP18.35■□□□□ 0.53
NCBP2-208ENST00000455953 MSH5O43196 834 aa18.05■□□□□ 0.48
NCBP2-208ENST00000455953 NISCHQ9Y2I1 1504 aa17.34■□□□□ 0.37
NCBP2-208ENST00000455953 MAPK8IP2Q13387 824 aaPredicted RBP17.01■□□□□ 0.31
NCBP2-208ENST00000455953 POTEDQ86YR6 584 aa17.01■□□□□ 0.31
NCBP2-208ENST00000455953 PPP4R3CPQ6ZMV5 832 aa16.94■□□□□ 0.3
NCBP2-208ENST00000455953 SCAF1Q9H7N4 1312 aaKnown RBP16.88■□□□□ 0.29
NCBP2-208ENST00000455953 DMRT2Q9Y5R5 561 aa16.72■□□□□ 0.27
NCBP2-208ENST00000455953 CNKSR2Q8WXI2 1034 aa16.49■□□□□ 0.23
NCBP2-208ENST00000455953 NCBP3Q53F19 620 aaKnown RBP16.33■□□□□ 0.2
NCBP2-208ENST00000455953 KCNA4P22459 653 aa16.3■□□□□ 0.2
NCBP2-208ENST00000455953 HOXD11P31277 338 aaPredicted RBP16.26■□□□□ 0.19
NCBP2-208ENST00000455953 RNF216Q9NWF9 866 aaPredicted RBP16.23■□□□□ 0.19
NCBP2-208ENST00000455953 NPM3O75607 178 aaKnown RBP16.21■□□□□ 0.19
NCBP2-208ENST00000455953 DCAF8L1A6NGE4 600 aa16.03■□□□□ 0.16
NCBP2-208ENST00000455953 DNAJC5BQ9UF47 199 aa15.69■□□□□ 0.1
NCBP2-208ENST00000455953 CCDC180Q9P1Z9 1646 aa15.66■□□□□ 0.1
NCBP2-208ENST00000455953 RNF39Q9H2S5 420 aa15.5■□□□□ 0.07
NCBP2-208ENST00000455953 ABCC9O60706 1549 aa15.48■□□□□ 0.07
NCBP2-208ENST00000455953 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.48■□□□□ 0.073e-8■■■□□ 17.8
NCBP2-208ENST00000455953 SLC4A2P04920 1241 aa15.41■□□□□ 0.06
NCBP2-208ENST00000455953 SLC4A1APQ9BWU0 796 aaKnown RBP15.41■□□□□ 0.06
NCBP2-208ENST00000455953 CACNB1Q02641 598 aaPredicted RBP15.29■□□□□ 0.04
NCBP2-208ENST00000455953 U3KPZ7 1027 aaPredicted RBP15.26■□□□□ 0.03
NCBP2-208ENST00000455953 C1QBPQ07021 282 aaKnown RBP15.25■□□□□ 0.03
NCBP2-208ENST00000455953 ZBTB22O15209 634 aa15.03■□□□□ -0
NCBP2-208ENST00000455953 FOXD4L1Q9NU39 408 aa15□□□□□ -0.01
NCBP2-208ENST00000455953 SPINK5Q9NQ38 1064 aaPredicted RBP14.95□□□□□ -0.02
NCBP2-208ENST00000455953 MYCNP04198 464 aaPredicted RBP14.91□□□□□ -0.02
NCBP2-208ENST00000455953 RB1CC1Q8TDY2 1594 aa14.87□□□□□ -0.03
NCBP2-208ENST00000455953 CAPN15O75808 1086 aa14.84□□□□□ -0.03
NCBP2-208ENST00000455953 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.83□□□□□ -0.04
NCBP2-208ENST00000455953 HNRNPUL2Q1KMD3 747 aaKnown RBP14.83□□□□□ -0.04
NCBP2-208ENST00000455953 SAMD1Q6SPF0 538 aaPredicted RBP14.8□□□□□ -0.04
NCBP2-208ENST00000455953 DCAF8L2P0C7V8 631 aa14.76□□□□□ -0.05
NCBP2-208ENST00000455953 NACADO15069 1562 aa14.74□□□□□ -0.05
NCBP2-208ENST00000455953 TRHP20396 242 aaPredicted RBP14.72□□□□□ -0.05
NCBP2-208ENST00000455953 EHMT2Q96KQ7 1210 aa14.71□□□□□ -0.05
NCBP2-208ENST00000455953 APLP2Q06481 763 aa14.7□□□□□ -0.06
NCBP2-208ENST00000455953 CSRNP3Q8WYN3 585 aa14.68□□□□□ -0.06
NCBP2-208ENST00000455953 DSG3P32926 999 aa14.67□□□□□ -0.06
NCBP2-208ENST00000455953 ATF5Q9Y2D1 282 aaPredicted RBP14.67□□□□□ -0.06
NCBP2-208ENST00000455953 ZNF219Q9P2Y4 722 aaPredicted RBP14.63□□□□□ -0.07
NCBP2-208ENST00000455953 ABCB7O75027 752 aa14.58□□□□□ -0.08
NCBP2-208ENST00000455953 UNC13AQ9UPW8 1703 aa14.52□□□□□ -0.09
NCBP2-208ENST00000455953 MYO15BQ96JP2 1530 aa14.48□□□□□ -0.09
NCBP2-208ENST00000455953 ATXN8OSP0DMR3 200 aa14.45□□□□□ -0.1
NCBP2-208ENST00000455953 POLA2Q14181 598 aa14.42□□□□□ -0.1
NCBP2-208ENST00000455953 PABPN1Q86U42 306 aaKnown RBP eCLIP14.38□□□□□ -0.11
NCBP2-208ENST00000455953 ZCCHC6Q5VYS8 1495 aaKnown RBP14.38□□□□□ -0.11
NCBP2-208ENST00000455953 DCAF1Q9Y4B6 1507 aa14.33□□□□□ -0.12
NCBP2-208ENST00000455953 SCRIBQ14160 1630 aa14.24□□□□□ -0.13
NCBP2-208ENST00000455953 BICRAQ9NZM4 1560 aa14.24□□□□□ -0.13
NCBP2-208ENST00000455953 SHROOM4Q9ULL8 1493 aa14.2□□□□□ -0.14
NCBP2-208ENST00000455953 ZBTB12Q9Y330 459 aaPredicted RBP14.04□□□□□ -0.16
NCBP2-208ENST00000455953 CC2D2AQ9P2K1 1620 aa14.01□□□□□ -0.17
NCBP2-208ENST00000455953 MKRN4PQ13434 485 aaPredicted RBP13.99□□□□□ -0.17
NCBP2-208ENST00000455953 EIF4G1Q04637 1599 aaKnown RBP13.99□□□□□ -0.17
NCBP2-208ENST00000455953 CECR2Q9BXF3 1484 aa13.95□□□□□ -0.18
NCBP2-208ENST00000455953 OSCARQ8IYS5 282 aa13.95□□□□□ -0.18
NCBP2-208ENST00000455953 FBLN2P98095 1184 aa13.91□□□□□ -0.18
NCBP2-208ENST00000455953 RBM42Q9BTD8 480 aaKnown RBP13.88□□□□□ -0.19
NCBP2-208ENST00000455953 AKT1S1Q96B36 256 aa13.7□□□□□ -0.22
NCBP2-208ENST00000455953 SPDYE2BA6NHP3 402 aa13.69□□□□□ -0.22
NCBP2-208ENST00000455953 SPDYE6P0CI01 402 aa13.69□□□□□ -0.22
NCBP2-208ENST00000455953 SPDYE2Q495Y8 402 aa13.69□□□□□ -0.22
NCBP2-208ENST00000455953 ZNF692Q9BU19 519 aaPredicted RBP13.64□□□□□ -0.23
NCBP2-208ENST00000455953 REM2Q8IYK8 340 aaPredicted RBP13.62□□□□□ -0.23
NCBP2-208ENST00000455953 SSUH2Q9Y2M2 353 aa13.6□□□□□ -0.23
NCBP2-208ENST00000455953 SMARCA2P51531 1590 aa13.57□□□□□ -0.24
NCBP2-208ENST00000455953 SMARCA4P51532 1647 aa13.57□□□□□ -0.24
NCBP2-208ENST00000455953 BAZ1AQ9NRL2 1556 aaPredicted RBP13.54□□□□□ -0.24
NCBP2-208ENST00000455953 NCAPD3P42695 1498 aa13.5□□□□□ -0.25
NCBP2-208ENST00000455953 ERCC6Q03468 1493 aa13.49□□□□□ -0.25
NCBP2-208ENST00000455953 CHRDL2Q6WN34 429 aa13.49□□□□□ -0.25
NCBP2-208ENST00000455953 HMGXB3Q12766 1538 aa13.49□□□□□ -0.25
NCBP2-208ENST00000455953 ATAD2BQ9ULI0 1458 aa13.48□□□□□ -0.25
NCBP2-208ENST00000455953 SPDYE4A6NLX3 237 aa13.48□□□□□ -0.25
NCBP2-208ENST00000455953 PITPNM1O00562 1244 aa13.48□□□□□ -0.25
NCBP2-208ENST00000455953 BAZ1BQ9UIG0 1483 aaKnown RBP13.47□□□□□ -0.25
NCBP2-208ENST00000455953 POTEHQ6S545 545 aa13.39□□□□□ -0.27
NCBP2-208ENST00000455953 PEG3Q9GZU2 1588 aa13.37□□□□□ -0.27
NCBP2-208ENST00000455953 CLEC11AQ9Y240 323 aa13.36□□□□□ -0.27
NCBP2-208ENST00000455953 CUX2O14529 1486 aa13.36□□□□□ -0.27
NCBP2-208ENST00000455953 SPDYE1Q8NFV5 336 aaPredicted RBP13.35□□□□□ -0.27
NCBP2-208ENST00000455953 MROH2BQ7Z745 1585 aa13.32□□□□□ -0.28
NCBP2-208ENST00000455953 LAMC3Q9Y6N6 1575 aa13.31□□□□□ -0.28
NCBP2-208ENST00000455953 PIP4P2Q8N4L2 257 aa13.29□□□□□ -0.28
NCBP2-208ENST00000455953 NESP48681 1621 aa13.26□□□□□ -0.29
NCBP2-208ENST00000455953 FXR2P51116 673 aaKnown RBP eCLIP13.26□□□□□ -0.29
NCBP2-208ENST00000455953 FKBP8Q14318 412 aa13.26□□□□□ -0.29
NCBP2-208ENST00000455953 WIZO95785 1651 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms