RNA–Protein interactions for RNA: ENST00000455805.5

C1orf228-217, Transcript of Uncharacterized protein C1orf228, humanhuman

TSL 3

Gene C1orf228, Length 747 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf228-217ENST00000455805 CHIC1Q5VXU3 224 aa19.02■□□□□ 0.64
C1orf228-217ENST00000455805 AEBP2Q6ZN18 517 aaPredicted RBP18.37■□□□□ 0.53
C1orf228-217ENST00000455805 NISCHQ9Y2I1 1504 aa16.96■□□□□ 0.3
C1orf228-217ENST00000455805 PHF23Q9BUL5 403 aaPredicted RBP16.74■□□□□ 0.27
C1orf228-217ENST00000455805 PLPPR3Q6T4P5 718 aa15.98■□□□□ 0.15
C1orf228-217ENST00000455805 SENP3Q9H4L4 574 aaPredicted RBP15.59■□□□□ 0.09
C1orf228-217ENST00000455805 EHMT2Q96KQ7 1210 aa15.29■□□□□ 0.04
C1orf228-217ENST00000455805 KCNA4P22459 653 aa14.96□□□□□ -0.01
C1orf228-217ENST00000455805 CCDC180Q9P1Z9 1646 aa14.84□□□□□ -0.03
C1orf228-217ENST00000455805 ADRA2BP18089 450 aa14.79□□□□□ -0.04
C1orf228-217ENST00000455805 ABCC9O60706 1549 aa14.57□□□□□ -0.08
C1orf228-217ENST00000455805 CSRNP3Q8WYN3 585 aa14.52□□□□□ -0.09
C1orf228-217ENST00000455805 SLC4A1APQ9BWU0 796 aaKnown RBP14.52□□□□□ -0.09
C1orf228-217ENST00000455805 PPP6R1Q9UPN7 881 aa14.44□□□□□ -0.1
C1orf228-217ENST00000455805 FOXD1Q16676 465 aa14.24□□□□□ -0.13
C1orf228-217ENST00000455805 DCAF8L2P0C7V8 631 aa14.21□□□□□ -0.13
C1orf228-217ENST00000455805 NCBP3Q53F19 620 aaKnown RBP14.21□□□□□ -0.13
C1orf228-217ENST00000455805 PPP4R3CPQ6ZMV5 832 aa14.17□□□□□ -0.14
C1orf228-217ENST00000455805 SLC24A1O60721 1099 aa14.16□□□□□ -0.14
C1orf228-217ENST00000455805 ZCCHC6Q5VYS8 1495 aaKnown RBP14.13□□□□□ -0.15
C1orf228-217ENST00000455805 NACADO15069 1562 aa13.97□□□□□ -0.17
C1orf228-217ENST00000455805 DCAF1Q9Y4B6 1507 aa13.95□□□□□ -0.18
C1orf228-217ENST00000455805 RB1CC1Q8TDY2 1594 aa13.94□□□□□ -0.18
C1orf228-217ENST00000455805 MYO15BQ96JP2 1530 aa13.92□□□□□ -0.18
C1orf228-217ENST00000455805 NPM3O75607 178 aaKnown RBP13.86□□□□□ -0.19
C1orf228-217ENST00000455805 AMER1Q5JTC6 1135 aaPredicted RBP13.84□□□□□ -0.19
C1orf228-217ENST00000455805 PIAS4Q8N2W9 510 aaPredicted RBP13.79□□□□□ -0.2
C1orf228-217ENST00000455805 PABPN1Q86U42 306 aaKnown RBP eCLIP13.75□□□□□ -0.21
C1orf228-217ENST00000455805 RTN4Q9NQC3 1192 aaKnown RBP13.74□□□□□ -0.21
C1orf228-217ENST00000455805 ZBTB22O15209 634 aa13.71□□□□□ -0.21
C1orf228-217ENST00000455805 SCRIBQ14160 1630 aa13.7□□□□□ -0.22
C1orf228-217ENST00000455805 UNC13AQ9UPW8 1703 aa13.68□□□□□ -0.22
C1orf228-217ENST00000455805 BICRAQ9NZM4 1560 aa13.65□□□□□ -0.22
C1orf228-217ENST00000455805 SHROOM4Q9ULL8 1493 aa13.63□□□□□ -0.23
C1orf228-217ENST00000455805 CNKSR2Q8WXI2 1034 aa13.58□□□□□ -0.24
C1orf228-217ENST00000455805 FOXD4L1Q9NU39 408 aa13.55□□□□□ -0.24
C1orf228-217ENST00000455805 SCAF1Q9H7N4 1312 aaKnown RBP13.47□□□□□ -0.25
C1orf228-217ENST00000455805 DNAJC5BQ9UF47 199 aa13.41□□□□□ -0.26
C1orf228-217ENST00000455805 CECR2Q9BXF3 1484 aa13.3□□□□□ -0.28
C1orf228-217ENST00000455805 EIF4G1Q04637 1599 aaKnown RBP13.2□□□□□ -0.3
C1orf228-217ENST00000455805 FKBP8Q14318 412 aa13.17□□□□□ -0.3
C1orf228-217ENST00000455805 MROH2BQ7Z745 1585 aa13.13□□□□□ -0.31
C1orf228-217ENST00000455805 CC2D2AQ9P2K1 1620 aa13.13□□□□□ -0.31
C1orf228-217ENST00000455805 SMARCA4P51532 1647 aa13.08□□□□□ -0.32
C1orf228-217ENST00000455805 RSF1Q96T23 1441 aaPredicted RBP13.05□□□□□ -0.32
C1orf228-217ENST00000455805 BAZ1AQ9NRL2 1556 aaPredicted RBP13.05□□□□□ -0.32
C1orf228-217ENST00000455805 RNF216Q9NWF9 866 aaPredicted RBP13.04□□□□□ -0.32
C1orf228-217ENST00000455805 ATAD2BQ9ULI0 1458 aa13.03□□□□□ -0.32
C1orf228-217ENST00000455805 ATXN8OSP0DMR3 200 aa12.98□□□□□ -0.33
C1orf228-217ENST00000455805 NCAPD3P42695 1498 aa12.97□□□□□ -0.33
C1orf228-217ENST00000455805 WIZO95785 1651 aa12.97□□□□□ -0.33
C1orf228-217ENST00000455805 PEG3Q9GZU2 1588 aa12.93□□□□□ -0.34
C1orf228-217ENST00000455805 SUPT5HO00267 1087 aaKnown RBP12.91□□□□□ -0.34
C1orf228-217ENST00000455805 SMARCA2P51531 1590 aa12.9□□□□□ -0.34
C1orf228-217ENST00000455805 MAPK8IP2Q13387 824 aaPredicted RBP12.87□□□□□ -0.35
C1orf228-217ENST00000455805 BAZ1BQ9UIG0 1483 aaKnown RBP12.86□□□□□ -0.35
C1orf228-217ENST00000455805 MYCNP04198 464 aaPredicted RBP12.86□□□□□ -0.35
C1orf228-217ENST00000455805 MSH5O43196 834 aa12.85□□□□□ -0.35
C1orf228-217ENST00000455805 HMGXB3Q12766 1538 aa12.83□□□□□ -0.35
C1orf228-217ENST00000455805 SLC4A2P04920 1241 aa12.77□□□□□ -0.37
C1orf228-217ENST00000455805 TOP2AP11388 1531 aaKnown RBP12.77□□□□□ -0.37
C1orf228-217ENST00000455805 CCDC88BA6NC98 1476 aa12.72□□□□□ -0.37
C1orf228-217ENST00000455805 NESP48681 1621 aa12.7□□□□□ -0.38
C1orf228-217ENST00000455805 HOXD11P31277 338 aaPredicted RBP12.67□□□□□ -0.38
C1orf228-217ENST00000455805 PLCB2Q00722 1185 aa12.66□□□□□ -0.38
C1orf228-217ENST00000455805 CADPSQ9ULU8 1353 aa12.62□□□□□ -0.39
C1orf228-217ENST00000455805 BCANQ96GW7 911 aa12.59□□□□□ -0.39
C1orf228-217ENST00000455805 HAP1P54257 671 aaPredicted RBP12.57□□□□□ -0.4
C1orf228-217ENST00000455805 CFTRP13569 1480 aa12.56□□□□□ -0.4
C1orf228-217ENST00000455805 DMRT2Q9Y5R5 561 aa12.55□□□□□ -0.4
C1orf228-217ENST00000455805 LAMC3Q9Y6N6 1575 aa12.51□□□□□ -0.41
C1orf228-217ENST00000455805 FBXO3Q9UK99 471 aa12.5□□□□□ -0.41
C1orf228-217ENST00000455805 FANCD2Q9BXW9 1451 aa12.46□□□□□ -0.42
C1orf228-217ENST00000455805 PDS5BQ9NTI5 1447 aa12.45□□□□□ -0.42
C1orf228-217ENST00000455805 ERCC6Q03468 1493 aa12.44□□□□□ -0.42
C1orf228-217ENST00000455805 KIF21AQ7Z4S6 1674 aa12.44□□□□□ -0.42
C1orf228-217ENST00000455805 TAOK2Q9UL54 1235 aa12.38□□□□□ -0.43
C1orf228-217ENST00000455805 PRKCSHP14314 528 aaPredicted RBP12.37□□□□□ -0.43
C1orf228-217ENST00000455805 CEP164Q9UPV0 1460 aa12.37□□□□□ -0.43
C1orf228-217ENST00000455805 URB2Q14146 1524 aaKnown RBP12.37□□□□□ -0.43
C1orf228-217ENST00000455805 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.36□□□□□ -0.43
C1orf228-217ENST00000455805 HNRNPUL2Q1KMD3 747 aaKnown RBP12.36□□□□□ -0.43
C1orf228-217ENST00000455805 VSIG10Q8N0Z9 540 aa12.35□□□□□ -0.43
C1orf228-217ENST00000455805 THOC2Q8NI27 1593 aaKnown RBP12.35□□□□□ -0.43
C1orf228-217ENST00000455805 MRC2Q9UBG0 1479 aa12.34□□□□□ -0.43
C1orf228-217ENST00000455805 SAMD1Q6SPF0 538 aaPredicted RBP12.33□□□□□ -0.44
C1orf228-217ENST00000455805 PRDM2Q13029 1718 aa12.32□□□□□ -0.44
C1orf228-217ENST00000455805 ABCC8Q09428 1581 aa12.3□□□□□ -0.44
C1orf228-217ENST00000455805 ATF5Q9Y2D1 282 aaPredicted RBP12.3□□□□□ -0.44
C1orf228-217ENST00000455805 CUX1P39880 1505 aa12.29□□□□□ -0.44
C1orf228-217ENST00000455805 TOPBP1Q92547 1522 aa12.28□□□□□ -0.44
C1orf228-217ENST00000455805 WDR62O43379 1518 aa12.27□□□□□ -0.44
C1orf228-217ENST00000455805 CUX2O14529 1486 aa12.25□□□□□ -0.45
C1orf228-217ENST00000455805 SYNJ1O43426 1573 aa12.22□□□□□ -0.45
C1orf228-217ENST00000455805 DNMBPQ6XZF7 1577 aa12.22□□□□□ -0.45
C1orf228-217ENST00000455805 WRNQ14191 1432 aaPredicted RBP eCLIP12.22□□□□□ -0.45
C1orf228-217ENST00000455805 RAD54L2Q9Y4B4 1467 aa12.21□□□□□ -0.45
C1orf228-217ENST00000455805 VASPP50552 380 aaPredicted RBP12.21□□□□□ -0.45
C1orf228-217ENST00000455805 TPRNQ4KMQ1 711 aa12.21□□□□□ -0.45
C1orf228-217ENST00000455805 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms