RNA–Protein interactions for RNA: ENST00000451963.1

STAG3-209, Transcript of stromal antigen 3, humanhuman

TSL 2

Gene STAG3, Length 3,056 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3-209ENST00000451963 NISCHQ9Y2I1 1504 aa29.57■■■□□ 2.32
STAG3-209ENST00000451963 SHROOM4Q9ULL8 1493 aa25.66■■□□□ 1.7
STAG3-209ENST00000451963 SUPT5HO00267 1087 aaKnown RBP25.29■■□□□ 1.64
STAG3-209ENST00000451963 DCAF8L2P0C7V8 631 aa25.1■■□□□ 1.61
STAG3-209ENST00000451963 ZCCHC6Q5VYS8 1495 aaKnown RBP24.96■■□□□ 1.59
STAG3-209ENST00000451963 CCDC180Q9P1Z9 1646 aa24.91■■□□□ 1.58
STAG3-209ENST00000451963 CHIC1Q5VXU3 224 aa24.42■■□□□ 1.5
STAG3-209ENST00000451963 MYO15BQ96JP2 1530 aa24.18■■□□□ 1.46
STAG3-209ENST00000451963 DCAF1Q9Y4B6 1507 aa24.1■■□□□ 1.45
STAG3-209ENST00000451963 PCGF6Q9BYE7 350 aa23.93■■□□□ 1.42
STAG3-209ENST00000451963 LOC105371045A0A1W2PR82 267 aa23.83■■□□□ 1.41
STAG3-209ENST00000451963 HRCP23327 699 aa23.83■■□□□ 1.41
STAG3-209ENST00000451963 SCRIBQ14160 1630 aa23.62■■□□□ 1.37
STAG3-209ENST00000451963 ABCC9O60706 1549 aa23.53■■□□□ 1.36
STAG3-209ENST00000451963 RSF1Q96T23 1441 aaPredicted RBP23.51■■□□□ 1.35
STAG3-209ENST00000451963 TRIM41Q8WV44 630 aa23.49■■□□□ 1.35
STAG3-209ENST00000451963 PPARGC1BQ86YN6 1023 aaKnown RBP23.43■■□□□ 1.34
STAG3-209ENST00000451963 FAM9AQ8IZU1 332 aaPredicted RBP23.42■■□□□ 1.34
STAG3-209ENST00000451963 TRIM26Q12899 539 aaPredicted RBP23.34■■□□□ 1.33
STAG3-209ENST00000451963 EHMT2Q96KQ7 1210 aa23.33■■□□□ 1.33
STAG3-209ENST00000451963 RB1CC1Q8TDY2 1594 aa23.2■■□□□ 1.31
STAG3-209ENST00000451963 CECR2Q9BXF3 1484 aa23.15■■□□□ 1.3
STAG3-209ENST00000451963 NACADO15069 1562 aa23.15■■□□□ 1.3
STAG3-209ENST00000451963 MROH2BQ7Z745 1585 aa23.03■■□□□ 1.28
STAG3-209ENST00000451963 WIZO95785 1651 aa22.89■■□□□ 1.25
STAG3-209ENST00000451963 ZEB1P37275 1124 aaPredicted RBP22.88■■□□□ 1.25
STAG3-209ENST00000451963 BAZ1AQ9NRL2 1556 aaPredicted RBP22.71■■□□□ 1.23
STAG3-209ENST00000451963 TTBK1Q5TCY1 1321 aaPredicted RBP22.57■■□□□ 1.2
STAG3-209ENST00000451963 PABPN1Q86U42 306 aaKnown RBP eCLIP22.55■■□□□ 1.2
STAG3-209ENST00000451963 CCDC88BA6NC98 1476 aa22.5■■□□□ 1.19
STAG3-209ENST00000451963 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.49■■□□□ 1.19
STAG3-209ENST00000451963 CCER1Q8TC90 406 aaPredicted RBP22.49■■□□□ 1.19
STAG3-209ENST00000451963 ABCC8Q09428 1581 aa22.49■■□□□ 1.19
STAG3-209ENST00000451963 TOP2AP11388 1531 aaKnown RBP22.48■■□□□ 1.19
STAG3-209ENST00000451963 SMARCA4P51532 1647 aa22.46■■□□□ 1.19
STAG3-209ENST00000451963 UBTFP17480 764 aaKnown RBP22.44■■□□□ 1.18
STAG3-209ENST00000451963 EIF4G1Q04637 1599 aaKnown RBP22.38■■□□□ 1.17
STAG3-209ENST00000451963 SMARCA2P51531 1590 aa22.36■■□□□ 1.17
STAG3-209ENST00000451963 SOGA1O94964 1423 aa22.36■■□□□ 1.17
STAG3-209ENST00000451963 CSRNP3Q8WYN3 585 aa22.35■■□□□ 1.17
STAG3-209ENST00000451963 CEP162Q5TB80 1403 aa22.29■■□□□ 1.16
STAG3-209ENST00000451963 UNC13AQ9UPW8 1703 aa22.27■■□□□ 1.16
STAG3-209ENST00000451963 TNIKQ9UKE5 1360 aa22.22■■□□□ 1.15
STAG3-209ENST00000451963 RUSC2Q8N2Y8 1516 aa22.21■■□□□ 1.15
STAG3-209ENST00000451963 EEA1Q15075 1411 aa22.17■■□□□ 1.14
STAG3-209ENST00000451963 WRNQ14191 1432 aaPredicted RBP eCLIP22.15■■□□□ 1.14
STAG3-209ENST00000451963 RANGAP1P46060 587 aaPredicted RBP22.1■■□□□ 1.13
STAG3-209ENST00000451963 BICRAQ9NZM4 1560 aa22.08■■□□□ 1.12
STAG3-209ENST00000451963 GOLGA3Q08378 1498 aa22.07■■□□□ 1.12
STAG3-209ENST00000451963 DIEXFQ68CQ4 756 aaKnown RBP22.02■■□□□ 1.12
STAG3-209ENST00000451963 SCAF1Q9H7N4 1312 aaKnown RBP22.02■■□□□ 1.11
STAG3-209ENST00000451963 APLP2Q06481 763 aa22.01■■□□□ 1.11
STAG3-209ENST00000451963 HNRNPUL2Q1KMD3 747 aaKnown RBP21.99■■□□□ 1.11
STAG3-209ENST00000451963 BAZ1BQ9UIG0 1483 aaKnown RBP21.96■■□□□ 1.11
STAG3-209ENST00000451963 ATAD2BQ9ULI0 1458 aa21.95■■□□□ 1.1
STAG3-209ENST00000451963 CEP164Q9UPV0 1460 aa21.93■■□□□ 1.1
STAG3-209ENST00000451963 CLIP1P30622 1438 aa21.9■■□□□ 1.1
STAG3-209ENST00000451963 PEG3Q9GZU2 1588 aa21.9■■□□□ 1.1
STAG3-209ENST00000451963 SYNJ1O43426 1573 aa21.89■■□□□ 1.1
STAG3-209ENST00000451963 ACIN1Q9UKV3 1341 aaKnown RBP21.82■■□□□ 1.08
STAG3-209ENST00000451963 CENPBP07199 599 aaPredicted RBP21.81■■□□□ 1.08
STAG3-209ENST00000451963 NEUROD1Q13562 356 aa21.8■■□□□ 1.08
STAG3-209ENST00000451963 ZNF316A6NFI3 1004 aaPredicted RBP21.79■■□□□ 1.08
STAG3-209ENST00000451963 RAPGEF2Q9Y4G8 1499 aa21.77■■□□□ 1.08
STAG3-209ENST00000451963 KIF21BO75037 1637 aa21.74■■□□□ 1.07
STAG3-209ENST00000451963 VPS8Q8N3P4 1428 aa21.74■■□□□ 1.07
STAG3-209ENST00000451963 PELP1Q8IZL8 1130 aaKnown RBP21.67■■□□□ 1.06
STAG3-209ENST00000451963 YTHDC1Q96MU7 727 aaKnown RBP21.65■■□□□ 1.06
STAG3-209ENST00000451963 GTF3C3Q9Y5Q9 886 aa21.65■■□□□ 1.06
STAG3-209ENST00000451963 TOP2BQ02880 1626 aa21.58■■□□□ 1.05
STAG3-209ENST00000451963 MIER1Q8N108 512 aa21.5■■□□□ 1.03
STAG3-209ENST00000451963 KANK4Q5T7N3 995 aaPredicted RBP21.49■■□□□ 1.03
STAG3-209ENST00000451963 KIF27Q86VH2 1401 aa21.48■■□□□ 1.03
STAG3-209ENST00000451963 NCAPD3P42695 1498 aa21.47■■□□□ 1.03
STAG3-209ENST00000451963 ITGAEP38570 1179 aa21.46■■□□□ 1.03
STAG3-209ENST00000451963 PRXQ9BXM0 1461 aa21.45■■□□□ 1.03
STAG3-209ENST00000451963 BIVM-ERCC5R4GMW8 1640 aa21.42■■□□□ 1.02
STAG3-209ENST00000451963 CUX1P39880 1505 aa21.41■■□□□ 1.02
STAG3-209ENST00000451963 ERICH3Q5RHP9 1530 aa21.4■■□□□ 1.02
STAG3-209ENST00000451963 ARAP1Q96P48 1450 aa21.39■■□□□ 1.01
STAG3-209ENST00000451963 HMGXB3Q12766 1538 aa21.38■■□□□ 1.01
STAG3-209ENST00000451963 CFTRP13569 1480 aa21.33■■□□□ 1.01
STAG3-209ENST00000451963 DHX57Q6P158 1386 aaKnown RBP21.3■■□□□ 1
STAG3-209ENST00000451963 ATP1B4Q9UN42 357 aaPredicted RBP21.3■■□□□ 1
STAG3-209ENST00000451963 CLSPNQ9HAW4 1339 aa21.29■■□□□ 1
STAG3-209ENST00000451963 CUX2O14529 1486 aa21.27■■□□□ 1
STAG3-209ENST00000451963 CCNB3Q8WWL7 1395 aa21.23■□□□□ 0.99
STAG3-209ENST00000451963 ARHGAP35Q9NRY4 1499 aa21.23■□□□□ 0.99
STAG3-209ENST00000451963 P3H3Q8IVL6 736 aa21.23■□□□□ 0.99
STAG3-209ENST00000451963 IGF1RP08069 1367 aa21.22■□□□□ 0.99
STAG3-209ENST00000451963 CARMIL1Q5VZK9 1371 aa21.18■□□□□ 0.98
STAG3-209ENST00000451963 CADPSQ9ULU8 1353 aa21.18■□□□□ 0.98
STAG3-209ENST00000451963 RRBP1Q9P2E9 1410 aaKnown RBP21.18■□□□□ 0.98
STAG3-209ENST00000451963 FAM50AQ14320 339 aaKnown RBP21.16■□□□□ 0.98
STAG3-209ENST00000451963 FGD5Q6ZNL6 1462 aa21.09■□□□□ 0.97
STAG3-209ENST00000451963 RAB3GAP2Q9H2M9 1393 aa21.06■□□□□ 0.96
STAG3-209ENST00000451963 FHAD1B1AJZ9 1412 aa20.97■□□□□ 0.95
STAG3-209ENST00000451963 SETD5Q9C0A6 1442 aa20.96■□□□□ 0.95
STAG3-209ENST00000451963 FANCD2Q9BXW9 1451 aa20.96■□□□□ 0.95
STAG3-209ENST00000451963 PHLDB1Q86UU1 1377 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms