RNA–Protein interactions for RNA: ENST00000451336.2

LINC00347-201, long intergenic non-protein coding RNA 347, humanhuman

TSL 2

Gene LINC00347, Length 679 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00347-201ENST00000451336 AEBP2Q6ZN18 517 aaPredicted RBP23.23■■□□□ 1.31
LINC00347-201ENST00000451336 CHIC1Q5VXU3 224 aa22.54■■□□□ 1.2
LINC00347-201ENST00000451336 PHF23Q9BUL5 403 aaPredicted RBP19.82■□□□□ 0.76
LINC00347-201ENST00000451336 SENP3Q9H4L4 574 aaPredicted RBP19.74■□□□□ 0.75
LINC00347-201ENST00000451336 FOXD1Q16676 465 aa18.33■□□□□ 0.52
LINC00347-201ENST00000451336 PLPPR3Q6T4P5 718 aa18.22■□□□□ 0.51
LINC00347-201ENST00000451336 PPP6R1Q9UPN7 881 aa17.53■□□□□ 0.4
LINC00347-201ENST00000451336 ADRA2BP18089 450 aa17.45■□□□□ 0.38
LINC00347-201ENST00000451336 PIAS4Q8N2W9 510 aaPredicted RBP17.19■□□□□ 0.34
LINC00347-201ENST00000451336 MSH5O43196 834 aa16.97■□□□□ 0.31
LINC00347-201ENST00000451336 NISCHQ9Y2I1 1504 aa16.53■□□□□ 0.24
LINC00347-201ENST00000451336 PPP4R3CPQ6ZMV5 832 aa16.01■□□□□ 0.15
LINC00347-201ENST00000451336 SCAF1Q9H7N4 1312 aaKnown RBP15.99■□□□□ 0.15
LINC00347-201ENST00000451336 MAPK8IP2Q13387 824 aaPredicted RBP15.89■□□□□ 0.13
LINC00347-201ENST00000451336 DMRT2Q9Y5R5 561 aa15.74■□□□□ 0.11
LINC00347-201ENST00000451336 POTEDQ86YR6 584 aa15.72■□□□□ 0.11
LINC00347-201ENST00000451336 CNKSR2Q8WXI2 1034 aa15.63■□□□□ 0.09
LINC00347-201ENST00000451336 NCBP3Q53F19 620 aaKnown RBP15.55■□□□□ 0.08
LINC00347-201ENST00000451336 KCNA4P22459 653 aa15.44■□□□□ 0.06
LINC00347-201ENST00000451336 HOXD11P31277 338 aaPredicted RBP15.38■□□□□ 0.05
LINC00347-201ENST00000451336 RNF216Q9NWF9 866 aaPredicted RBP15.38■□□□□ 0.05
LINC00347-201ENST00000451336 NPM3O75607 178 aaKnown RBP15.33■□□□□ 0.04
LINC00347-201ENST00000451336 DNAJC5BQ9UF47 199 aa15.12■□□□□ 0.01
LINC00347-201ENST00000451336 ABCC9O60706 1549 aa15.08■□□□□ 0.01
LINC00347-201ENST00000451336 DCAF8L1A6NGE4 600 aa14.91□□□□□ -0.02
LINC00347-201ENST00000451336 CCDC180Q9P1Z9 1646 aa14.72□□□□□ -0.05
LINC00347-201ENST00000451336 DNAJC5Q9H3Z4 198 aa14.67□□□□□ -0.06
LINC00347-201ENST00000451336 SLC4A1APQ9BWU0 796 aaKnown RBP14.66□□□□□ -0.06
LINC00347-201ENST00000451336 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.55□□□□□ -0.08
LINC00347-201ENST00000451336 RNF39Q9H2S5 420 aa14.55□□□□□ -0.08
LINC00347-201ENST00000451336 SLC4A2P04920 1241 aa14.54□□□□□ -0.08
LINC00347-201ENST00000451336 C1QBPQ07021 282 aaKnown RBP14.38□□□□□ -0.11
LINC00347-201ENST00000451336 U3KPZ7 1027 aaPredicted RBP14.34□□□□□ -0.11
LINC00347-201ENST00000451336 FOXD4L1Q9NU39 408 aa14.27□□□□□ -0.13
LINC00347-201ENST00000451336 ZBTB22O15209 634 aa14.23□□□□□ -0.13
LINC00347-201ENST00000451336 CACNB1Q02641 598 aaPredicted RBP14.2□□□□□ -0.14
LINC00347-201ENST00000451336 MYCNP04198 464 aaPredicted RBP14.16□□□□□ -0.14
LINC00347-201ENST00000451336 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.13□□□□□ -0.15
LINC00347-201ENST00000451336 HNRNPUL2Q1KMD3 747 aaKnown RBP14.13□□□□□ -0.15
LINC00347-201ENST00000451336 SAMD1Q6SPF0 538 aaPredicted RBP14.06□□□□□ -0.16
LINC00347-201ENST00000451336 CSRNP3Q8WYN3 585 aa14.02□□□□□ -0.17
LINC00347-201ENST00000451336 APLP2Q06481 763 aa13.99□□□□□ -0.17
LINC00347-201ENST00000451336 EHMT2Q96KQ7 1210 aa13.97□□□□□ -0.17
LINC00347-201ENST00000451336 SPINK5Q9NQ38 1064 aaPredicted RBP13.97□□□□□ -0.17
LINC00347-201ENST00000451336 RB1CC1Q8TDY2 1594 aa13.88□□□□□ -0.19
LINC00347-201ENST00000451336 CAPN15O75808 1086 aa13.88□□□□□ -0.19
LINC00347-201ENST00000451336 ATXN8OSP0DMR3 200 aa13.86□□□□□ -0.19
LINC00347-201ENST00000451336 MYO15BQ96JP2 1530 aa13.84□□□□□ -0.19
LINC00347-201ENST00000451336 PABPN1Q86U42 306 aaKnown RBP eCLIP13.83□□□□□ -0.2
LINC00347-201ENST00000451336 ZNF219Q9P2Y4 722 aaPredicted RBP13.83□□□□□ -0.2
LINC00347-201ENST00000451336 ZCCHC6Q5VYS8 1495 aaKnown RBP13.82□□□□□ -0.2
LINC00347-201ENST00000451336 NACADO15069 1562 aa13.8□□□□□ -0.2
LINC00347-201ENST00000451336 ATF5Q9Y2D1 282 aaPredicted RBP13.79□□□□□ -0.2
LINC00347-201ENST00000451336 DCAF1Q9Y4B6 1507 aa13.78□□□□□ -0.2
LINC00347-201ENST00000451336 DSG3P32926 999 aa13.77□□□□□ -0.21
LINC00347-201ENST00000451336 TRHP20396 242 aaPredicted RBP13.76□□□□□ -0.21
LINC00347-201ENST00000451336 CECR2Q9BXF3 1484 aa13.7□□□□□ -0.22
LINC00347-201ENST00000451336 UNC13AQ9UPW8 1703 aa13.64□□□□□ -0.23
LINC00347-201ENST00000451336 DCAF8L2P0C7V8 631 aa13.6□□□□□ -0.23
LINC00347-201ENST00000451336 CC2D2AQ9P2K1 1620 aa13.59□□□□□ -0.23
LINC00347-201ENST00000451336 ABCB7O75027 752 aa13.58□□□□□ -0.24
LINC00347-201ENST00000451336 POLA2Q14181 598 aa13.57□□□□□ -0.24
LINC00347-201ENST00000451336 TRIM41Q8WV44 630 aa13.56□□□□□ -0.24
LINC00347-201ENST00000451336 BICRAQ9NZM4 1560 aa13.54□□□□□ -0.24
LINC00347-201ENST00000451336 CUX2O14529 1486 aa13.45□□□□□ -0.26
LINC00347-201ENST00000451336 SHROOM4Q9ULL8 1493 aa13.36□□□□□ -0.27
LINC00347-201ENST00000451336 ZBTB12Q9Y330 459 aaPredicted RBP13.35□□□□□ -0.27
LINC00347-201ENST00000451336 SCRIBQ14160 1630 aa13.32□□□□□ -0.28
LINC00347-201ENST00000451336 EIF4G1Q04637 1599 aaKnown RBP13.28□□□□□ -0.28
LINC00347-201ENST00000451336 MKRN4PQ13434 485 aaPredicted RBP13.21□□□□□ -0.29
LINC00347-201ENST00000451336 FBLN2P98095 1184 aa13.19□□□□□ -0.3
LINC00347-201ENST00000451336 RBM42Q9BTD8 480 aaKnown RBP13.11□□□□□ -0.31
LINC00347-201ENST00000451336 ERCC6Q03468 1493 aa13.09□□□□□ -0.31
LINC00347-201ENST00000451336 OSCARQ8IYS5 282 aa13.07□□□□□ -0.32
LINC00347-201ENST00000451336 SPDYE2BA6NHP3 402 aa13□□□□□ -0.33
LINC00347-201ENST00000451336 SPDYE6P0CI01 402 aa13□□□□□ -0.33
LINC00347-201ENST00000451336 SPDYE2Q495Y8 402 aa13□□□□□ -0.33
LINC00347-201ENST00000451336 AKT1S1Q96B36 256 aa12.94□□□□□ -0.34
LINC00347-201ENST00000451336 SSUH2Q9Y2M2 353 aa12.9□□□□□ -0.34
LINC00347-201ENST00000451336 ZNF692Q9BU19 519 aaPredicted RBP12.87□□□□□ -0.35
LINC00347-201ENST00000451336 BAZ1AQ9NRL2 1556 aaPredicted RBP12.85□□□□□ -0.35
LINC00347-201ENST00000451336 SMARCA4P51532 1647 aa12.8□□□□□ -0.36
LINC00347-201ENST00000451336 SPDYE4A6NLX3 237 aa12.79□□□□□ -0.36
LINC00347-201ENST00000451336 REM2Q8IYK8 340 aaPredicted RBP12.79□□□□□ -0.36
LINC00347-201ENST00000451336 THOC2Q8NI27 1593 aaKnown RBP12.77□□□□□ -0.36
LINC00347-201ENST00000451336 ILDR1Q86SU0 546 aaPredicted RBP12.76□□□□□ -0.37
LINC00347-201ENST00000451336 SMARCA2P51531 1590 aa12.76□□□□□ -0.37
LINC00347-201ENST00000451336 PEG3Q9GZU2 1588 aa12.74□□□□□ -0.37
LINC00347-201ENST00000451336 NCAPD3P42695 1498 aa12.72□□□□□ -0.37
LINC00347-201ENST00000451336 HMGXB3Q12766 1538 aa12.71□□□□□ -0.38
LINC00347-201ENST00000451336 ATAD2BQ9ULI0 1458 aa12.71□□□□□ -0.38
LINC00347-201ENST00000451336 MROH2BQ7Z745 1585 aa12.69□□□□□ -0.38
LINC00347-201ENST00000451336 PROM2Q8N271 834 aa12.67□□□□□ -0.38
LINC00347-201ENST00000451336 NESP48681 1621 aa12.65□□□□□ -0.38
LINC00347-201ENST00000451336 RIMBP3CA6NJZ7 1639 aa12.64□□□□□ -0.39
LINC00347-201ENST00000451336 RIMBP3BA6NNM3 1639 aa12.64□□□□□ -0.39
LINC00347-201ENST00000451336 RIMBP3Q9UFD9 1639 aa12.64□□□□□ -0.39
LINC00347-201ENST00000451336 PITPNM1O00562 1244 aa12.63□□□□□ -0.39
LINC00347-201ENST00000451336 BAZ1BQ9UIG0 1483 aaKnown RBP12.63□□□□□ -0.39
LINC00347-201ENST00000451336 CHRDL2Q6WN34 429 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms