RNA–Protein interactions for RNA: ENST00000448915.1

RP9-202, Transcript of RP9, pre-mRNA splicing factor, humanhuman

APPRIS ALT2 TSL 3

Gene RP9, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RP9-202ENST00000448915 AEBP2Q6ZN18 517 aaPredicted RBP18.91■□□□□ 0.62
RP9-202ENST00000448915 CHIC1Q5VXU3 224 aa18.41■□□□□ 0.54
RP9-202ENST00000448915 PHF23Q9BUL5 403 aaPredicted RBP16.3■□□□□ 0.2
RP9-202ENST00000448915 SENP3Q9H4L4 574 aaPredicted RBP15.83■□□□□ 0.12
RP9-202ENST00000448915 PLPPR3Q6T4P5 718 aa14.86□□□□□ -0.03
RP9-202ENST00000448915 FOXD1Q16676 465 aa14.81□□□□□ -0.04
RP9-202ENST00000448915 PPP6R1Q9UPN7 881 aa14.36□□□□□ -0.11
RP9-202ENST00000448915 ADRA2BP18089 450 aa14.26□□□□□ -0.13
RP9-202ENST00000448915 PIAS4Q8N2W9 510 aaPredicted RBP13.85□□□□□ -0.19
RP9-202ENST00000448915 MSH5O43196 834 aa13.48□□□□□ -0.25
RP9-202ENST00000448915 PPP4R3CPQ6ZMV5 832 aa13.15□□□□□ -0.3
RP9-202ENST00000448915 KCNA4P22459 653 aa12.97□□□□□ -0.33
RP9-202ENST00000448915 MAPK8IP2Q13387 824 aaPredicted RBP12.95□□□□□ -0.34
RP9-202ENST00000448915 SCAF1Q9H7N4 1312 aaKnown RBP12.84□□□□□ -0.35
RP9-202ENST00000448915 POTEDQ86YR6 584 aa12.82□□□□□ -0.36
RP9-202ENST00000448915 CNKSR2Q8WXI2 1034 aa12.73□□□□□ -0.37
RP9-202ENST00000448915 DMRT2Q9Y5R5 561 aa12.72□□□□□ -0.37
RP9-202ENST00000448915 NPM3O75607 178 aaKnown RBP12.68□□□□□ -0.38
RP9-202ENST00000448915 NCBP3Q53F19 620 aaKnown RBP12.68□□□□□ -0.38
RP9-202ENST00000448915 HOXD11P31277 338 aaPredicted RBP12.51□□□□□ -0.41
RP9-202ENST00000448915 RNF216Q9NWF9 866 aaPredicted RBP12.51□□□□□ -0.41
RP9-202ENST00000448915 DNAJC5BQ9UF47 199 aa12.41□□□□□ -0.42
RP9-202ENST00000448915 NISCHQ9Y2I1 1504 aa12.28□□□□□ -0.44
RP9-202ENST00000448915 SLC4A1APQ9BWU0 796 aaKnown RBP12.25□□□□□ -0.45
RP9-202ENST00000448915 ABCC9O60706 1549 aa12.21□□□□□ -0.46
RP9-202ENST00000448915 ZBTB22O15209 634 aa12.05□□□□□ -0.48
RP9-202ENST00000448915 SLC4A2P04920 1241 aa12.04□□□□□ -0.48
RP9-202ENST00000448915 DNAJC5Q9H3Z4 198 aa12.04□□□□□ -0.48
RP9-202ENST00000448915 DCAF8L1A6NGE4 600 aa11.95□□□□□ -0.5
RP9-202ENST00000448915 EHMT2Q96KQ7 1210 aa11.94□□□□□ -0.5
RP9-202ENST00000448915 CSRNP3Q8WYN3 585 aa11.93□□□□□ -0.5
RP9-202ENST00000448915 FOXD4L1Q9NU39 408 aa11.84□□□□□ -0.51
RP9-202ENST00000448915 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.73□□□□□ -0.53
RP9-202ENST00000448915 U3KPZ7 1027 aaPredicted RBP11.73□□□□□ -0.53
RP9-202ENST00000448915 RNF39Q9H2S5 420 aa11.68□□□□□ -0.54
RP9-202ENST00000448915 MYCNP04198 464 aaPredicted RBP11.62□□□□□ -0.55
RP9-202ENST00000448915 ATF5Q9Y2D1 282 aaPredicted RBP11.47□□□□□ -0.57
RP9-202ENST00000448915 C1QBPQ07021 282 aaKnown RBP11.45□□□□□ -0.58
RP9-202ENST00000448915 ATXN8OSP0DMR3 200 aa11.42□□□□□ -0.58
RP9-202ENST00000448915 SAMD1Q6SPF0 538 aaPredicted RBP11.4□□□□□ -0.58
RP9-202ENST00000448915 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.38□□□□□ -0.59
RP9-202ENST00000448915 HNRNPUL2Q1KMD3 747 aaKnown RBP11.38□□□□□ -0.59
RP9-202ENST00000448915 SPINK5Q9NQ38 1064 aaPredicted RBP11.38□□□□□ -0.59
RP9-202ENST00000448915 PABPN1Q86U42 306 aaKnown RBP eCLIP11.27□□□□□ -0.61
RP9-202ENST00000448915 CCDC180Q9P1Z9 1646 aa11.22□□□□□ -0.61
RP9-202ENST00000448915 CACNB1Q02641 598 aaPredicted RBP11.18□□□□□ -0.62
RP9-202ENST00000448915 APLP2Q06481 763 aa11.18□□□□□ -0.62
RP9-202ENST00000448915 RB1CC1Q8TDY2 1594 aa11.17□□□□□ -0.62
RP9-202ENST00000448915 CAPN15O75808 1086 aa11.16□□□□□ -0.62
RP9-202ENST00000448915 ZNF219Q9P2Y4 722 aaPredicted RBP11.16□□□□□ -0.62
RP9-202ENST00000448915 TRHP20396 242 aaPredicted RBP11.13□□□□□ -0.63
RP9-202ENST00000448915 DSG3P32926 999 aa11.12□□□□□ -0.63
RP9-202ENST00000448915 CECR2Q9BXF3 1484 aa11.11□□□□□ -0.63
RP9-202ENST00000448915 TRIM41Q8WV44 630 aa11.07□□□□□ -0.64
RP9-202ENST00000448915 ABCB7O75027 752 aa11.03□□□□□ -0.64
RP9-202ENST00000448915 POLA2Q14181 598 aa11.03□□□□□ -0.64
RP9-202ENST00000448915 MKRN4PQ13434 485 aaPredicted RBP10.99□□□□□ -0.65
RP9-202ENST00000448915 CC2D2AQ9P2K1 1620 aa10.95□□□□□ -0.66
RP9-202ENST00000448915 BICRAQ9NZM4 1560 aa10.92□□□□□ -0.66
RP9-202ENST00000448915 CUX2O14529 1486 aa10.91□□□□□ -0.66
RP9-202ENST00000448915 NACADO15069 1562 aa10.89□□□□□ -0.67
RP9-202ENST00000448915 UNC13AQ9UPW8 1703 aa10.82□□□□□ -0.68
RP9-202ENST00000448915 ZBTB12Q9Y330 459 aaPredicted RBP10.75□□□□□ -0.69
RP9-202ENST00000448915 EIF4G1Q04637 1599 aaKnown RBP10.72□□□□□ -0.69
RP9-202ENST00000448915 FBLN2P98095 1184 aa10.71□□□□□ -0.69
RP9-202ENST00000448915 OSCARQ8IYS5 282 aa10.69□□□□□ -0.7
RP9-202ENST00000448915 DCAF8L2P0C7V8 631 aa10.67□□□□□ -0.7
RP9-202ENST00000448915 SHROOM4Q9ULL8 1493 aa10.67□□□□□ -0.7
RP9-202ENST00000448915 FKBP8Q14318 412 aa10.65□□□□□ -0.7
RP9-202ENST00000448915 PROM2Q8N271 834 aa10.62□□□□□ -0.71
RP9-202ENST00000448915 SPDYE4A6NLX3 237 aa10.59□□□□□ -0.71
RP9-202ENST00000448915 SSUH2Q9Y2M2 353 aa10.59□□□□□ -0.71
RP9-202ENST00000448915 ERCC6Q03468 1493 aa10.58□□□□□ -0.72
RP9-202ENST00000448915 SPDYE2BA6NHP3 402 aa10.55□□□□□ -0.72
RP9-202ENST00000448915 SPDYE6P0CI01 402 aa10.55□□□□□ -0.72
RP9-202ENST00000448915 SPDYE2Q495Y8 402 aa10.55□□□□□ -0.72
RP9-202ENST00000448915 ZNF692Q9BU19 519 aaPredicted RBP10.47□□□□□ -0.73
RP9-202ENST00000448915 MYO15BQ96JP2 1530 aa10.47□□□□□ -0.73
RP9-202ENST00000448915 ILDR1Q86SU0 546 aaPredicted RBP10.46□□□□□ -0.73
RP9-202ENST00000448915 RBM42Q9BTD8 480 aaKnown RBP10.43□□□□□ -0.74
RP9-202ENST00000448915 AKT1S1Q96B36 256 aa10.39□□□□□ -0.75
RP9-202ENST00000448915 REM2Q8IYK8 340 aaPredicted RBP10.33□□□□□ -0.76
RP9-202ENST00000448915 THOC2Q8NI27 1593 aaKnown RBP10.27□□□□□ -0.76
RP9-202ENST00000448915 SCRIBQ14160 1630 aa10.26□□□□□ -0.77
RP9-202ENST00000448915 PITPNM1O00562 1244 aa10.24□□□□□ -0.77
RP9-202ENST00000448915 NESP48681 1621 aa10.23□□□□□ -0.77
RP9-202ENST00000448915 RIMBP3CA6NJZ7 1639 aa10.18□□□□□ -0.78
RP9-202ENST00000448915 RIMBP3BA6NNM3 1639 aa10.18□□□□□ -0.78
RP9-202ENST00000448915 RIMBP3Q9UFD9 1639 aa10.18□□□□□ -0.78
RP9-202ENST00000448915 DCAF1Q9Y4B6 1507 aa10.18□□□□□ -0.78
RP9-202ENST00000448915 SPDYE1Q8NFV5 336 aaPredicted RBP10.18□□□□□ -0.78
RP9-202ENST00000448915 FBXO3Q9UK99 471 aa10.16□□□□□ -0.78
RP9-202ENST00000448915 BAZ1AQ9NRL2 1556 aaPredicted RBP10.16□□□□□ -0.78
RP9-202ENST00000448915 VASPP50552 380 aaPredicted RBP10.15□□□□□ -0.78
RP9-202ENST00000448915 NCAPD3P42695 1498 aa10.13□□□□□ -0.79
RP9-202ENST00000448915 STAG3Q9UJ98 1225 aa10.12□□□□□ -0.79
RP9-202ENST00000448915 ZCCHC6Q5VYS8 1495 aaKnown RBP10.11□□□□□ -0.79
RP9-202ENST00000448915 CYB5RLQ6IPT4 315 aa10.11□□□□□ -0.79
RP9-202ENST00000448915 SMARCA2P51531 1590 aa10.09□□□□□ -0.79
RP9-202ENST00000448915 ARHGEF11O15085 1522 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms