RNA–Protein interactions for RNA: ENST00000448753.5

DEPDC5-209, Transcript of DEP domain containing 5, humanhuman

TSL 1 (best)

Gene DEPDC5, Length 3,260 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC5-209ENST00000448753 NISCHQ9Y2I1 1504 aa21.65■■□□□ 1.06
DEPDC5-209ENST00000448753 SHROOM4Q9ULL8 1493 aa19.06■□□□□ 0.64
DEPDC5-209ENST00000448753 SUPT5HO00267 1087 aaKnown RBP18.71■□□□□ 0.59
DEPDC5-209ENST00000448753 DCAF8L2P0C7V8 631 aa18.47■□□□□ 0.55
DEPDC5-209ENST00000448753 ZCCHC6Q5VYS8 1495 aaKnown RBP18.31■□□□□ 0.52
DEPDC5-209ENST00000448753 CCDC180Q9P1Z9 1646 aa18.14■□□□□ 0.49
DEPDC5-209ENST00000448753 MYO15BQ96JP2 1530 aa18.08■□□□□ 0.48
DEPDC5-209ENST00000448753 CHIC1Q5VXU3 224 aa18.04■□□□□ 0.48
DEPDC5-209ENST00000448753 HRCP23327 699 aa18.01■□□□□ 0.47
DEPDC5-209ENST00000448753 PPARGC1BQ86YN6 1023 aaKnown RBP17.91■□□□□ 0.46
DEPDC5-209ENST00000448753 PCGF6Q9BYE7 350 aa17.86■□□□□ 0.45
DEPDC5-209ENST00000448753 LOC105371045A0A1W2PR82 267 aa17.72■□□□□ 0.43
DEPDC5-209ENST00000448753 DCAF1Q9Y4B6 1507 aa17.51■□□□□ 0.39
DEPDC5-209ENST00000448753 EHMT2Q96KQ7 1210 aa17.44■□□□□ 0.38
DEPDC5-209ENST00000448753 SCRIBQ14160 1630 aa17.42■□□□□ 0.38
DEPDC5-209ENST00000448753 FAM9AQ8IZU1 332 aaPredicted RBP17.38■□□□□ 0.37
DEPDC5-209ENST00000448753 ABCC9O60706 1549 aa17.3■□□□□ 0.36
DEPDC5-209ENST00000448753 RSF1Q96T23 1441 aaPredicted RBP17.28■□□□□ 0.36
DEPDC5-209ENST00000448753 PELP1Q8IZL8 1130 aaKnown RBP17.25■□□□□ 0.35
DEPDC5-209ENST00000448753 TRIM41Q8WV44 630 aa17.24■□□□□ 0.35
DEPDC5-209ENST00000448753 RB1CC1Q8TDY2 1594 aa17.19■□□□□ 0.34
DEPDC5-209ENST00000448753 TRIM26Q12899 539 aaPredicted RBP17.16■□□□□ 0.34
DEPDC5-209ENST00000448753 SCAF1Q9H7N4 1312 aaKnown RBP17.15■□□□□ 0.34
DEPDC5-209ENST00000448753 CECR2Q9BXF3 1484 aa17.1■□□□□ 0.33
DEPDC5-209ENST00000448753 MROH2BQ7Z745 1585 aa16.97■□□□□ 0.31
DEPDC5-209ENST00000448753 WIZO95785 1651 aa16.9■□□□□ 0.3
DEPDC5-209ENST00000448753 TTBK1Q5TCY1 1321 aaPredicted RBP16.87■□□□□ 0.29
DEPDC5-209ENST00000448753 ZEB1P37275 1124 aaPredicted RBP16.82■□□□□ 0.28
DEPDC5-209ENST00000448753 NACADO15069 1562 aa16.81■□□□□ 0.28
DEPDC5-209ENST00000448753 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.72■□□□□ 0.27
DEPDC5-209ENST00000448753 NEUROD1Q13562 356 aa16.71■□□□□ 0.27
DEPDC5-209ENST00000448753 ABCC8Q09428 1581 aa16.67■□□□□ 0.26
DEPDC5-209ENST00000448753 ACIN1Q9UKV3 1341 aaKnown RBP16.66■□□□□ 0.26
DEPDC5-209ENST00000448753 GTF3C3Q9Y5Q9 886 aa16.65■□□□□ 0.26
DEPDC5-209ENST00000448753 BAZ1AQ9NRL2 1556 aaPredicted RBP16.62■□□□□ 0.25
DEPDC5-209ENST00000448753 PABPN1Q86U42 306 aaKnown RBP eCLIP16.6■□□□□ 0.25
DEPDC5-209ENST00000448753 CCDC88BA6NC98 1476 aa16.59■□□□□ 0.25
DEPDC5-209ENST00000448753 CCER1Q8TC90 406 aaPredicted RBP16.58■□□□□ 0.24
DEPDC5-209ENST00000448753 EIF4G1Q04637 1599 aaKnown RBP16.54■□□□□ 0.24
DEPDC5-209ENST00000448753 SOGA1O94964 1423 aa16.52■□□□□ 0.24
DEPDC5-209ENST00000448753 MYT1Q01538 1121 aa16.5■□□□□ 0.23
DEPDC5-209ENST00000448753 RUSC2Q8N2Y8 1516 aa16.48■□□□□ 0.23
DEPDC5-209ENST00000448753 UBTFP17480 764 aaKnown RBP16.48■□□□□ 0.23
DEPDC5-209ENST00000448753 SMARCA4P51532 1647 aa16.47■□□□□ 0.23
DEPDC5-209ENST00000448753 TOP2AP11388 1531 aaKnown RBP16.47■□□□□ 0.23
DEPDC5-209ENST00000448753 CENPBP07199 599 aaPredicted RBP16.45■□□□□ 0.22
DEPDC5-209ENST00000448753 SMARCA2P51531 1590 aa16.45■□□□□ 0.22
DEPDC5-209ENST00000448753 DIEXFQ68CQ4 756 aaKnown RBP16.43■□□□□ 0.22
DEPDC5-209ENST00000448753 CEP162Q5TB80 1403 aa16.43■□□□□ 0.22
DEPDC5-209ENST00000448753 UNC13AQ9UPW8 1703 aa16.42■□□□□ 0.22
DEPDC5-209ENST00000448753 RANGAP1P46060 587 aaPredicted RBP16.41■□□□□ 0.22
DEPDC5-209ENST00000448753 YTHDC1Q96MU7 727 aaKnown RBP16.4■□□□□ 0.22
DEPDC5-209ENST00000448753 CSRNP3Q8WYN3 585 aa16.37■□□□□ 0.21
DEPDC5-209ENST00000448753 HNRNPUL2Q1KMD3 747 aaKnown RBP16.27■□□□□ 0.2
DEPDC5-209ENST00000448753 TNIKQ9UKE5 1360 aa16.27■□□□□ 0.2
DEPDC5-209ENST00000448753 WRNQ14191 1432 aaPredicted RBP eCLIP16.24■□□□□ 0.199e-6■■■■■ 50.1
DEPDC5-209ENST00000448753 BICRAQ9NZM4 1560 aa16.21■□□□□ 0.19
DEPDC5-209ENST00000448753 GOLGA3Q08378 1498 aa16.17■□□□□ 0.18
DEPDC5-209ENST00000448753 SYNJ1O43426 1573 aa16.17■□□□□ 0.18
DEPDC5-209ENST00000448753 EEA1Q15075 1411 aa16.12■□□□□ 0.17
DEPDC5-209ENST00000448753 CLIP1P30622 1438 aa16.09■□□□□ 0.17
DEPDC5-209ENST00000448753 RAPGEF2Q9Y4G8 1499 aa16.07■□□□□ 0.16
DEPDC5-209ENST00000448753 ATAD2BQ9ULI0 1458 aa16.06■□□□□ 0.16
DEPDC5-209ENST00000448753 BAZ1BQ9UIG0 1483 aaKnown RBP16.05■□□□□ 0.16
DEPDC5-209ENST00000448753 ZNF316A6NFI3 1004 aaPredicted RBP16.04■□□□□ 0.16
DEPDC5-209ENST00000448753 CEP164Q9UPV0 1460 aa16.04■□□□□ 0.16
DEPDC5-209ENST00000448753 MIER1Q8N108 512 aa16.04■□□□□ 0.16
DEPDC5-209ENST00000448753 APLP2Q06481 763 aa16.03■□□□□ 0.16
DEPDC5-209ENST00000448753 PEG3Q9GZU2 1588 aa15.97■□□□□ 0.15
DEPDC5-209ENST00000448753 VPS8Q8N3P4 1428 aa15.96■□□□□ 0.15
DEPDC5-209ENST00000448753 KIF21BO75037 1637 aa15.95■□□□□ 0.14
DEPDC5-209ENST00000448753 KANK4Q5T7N3 995 aaPredicted RBP15.9■□□□□ 0.14
DEPDC5-209ENST00000448753 ITGAEP38570 1179 aa15.88■□□□□ 0.13
DEPDC5-209ENST00000448753 TOP2BQ02880 1626 aa15.82■□□□□ 0.12
DEPDC5-209ENST00000448753 ARAP1Q96P48 1450 aa15.79■□□□□ 0.12
DEPDC5-209ENST00000448753 CUX1P39880 1505 aa15.76■□□□□ 0.11
DEPDC5-209ENST00000448753 SUPT16HQ9Y5B9 1047 aaKnown RBP15.75■□□□□ 0.11
DEPDC5-209ENST00000448753 BCL11AQ9H165 835 aa15.74■□□□□ 0.11
DEPDC5-209ENST00000448753 PRXQ9BXM0 1461 aa15.74■□□□□ 0.11
DEPDC5-209ENST00000448753 DHX57Q6P158 1386 aaKnown RBP15.73■□□□□ 0.11
DEPDC5-209ENST00000448753 BIVM-ERCC5R4GMW8 1640 aa15.71■□□□□ 0.1
DEPDC5-209ENST00000448753 ANP32EQ9BTT0 268 aa15.69■□□□□ 0.1
DEPDC5-209ENST00000448753 P3H3Q8IVL6 736 aa15.69■□□□□ 0.1
DEPDC5-209ENST00000448753 TSHZ2Q9NRE2 1034 aa15.69■□□□□ 0.1
DEPDC5-209ENST00000448753 KIF27Q86VH2 1401 aa15.68■□□□□ 0.1
DEPDC5-209ENST00000448753 ATP1B4Q9UN42 357 aaPredicted RBP15.67■□□□□ 0.1
DEPDC5-209ENST00000448753 BCANQ96GW7 911 aa15.66■□□□□ 0.1
DEPDC5-209ENST00000448753 ERICH3Q5RHP9 1530 aa15.64■□□□□ 0.09
DEPDC5-209ENST00000448753 ARHGAP35Q9NRY4 1499 aa15.63■□□□□ 0.09
DEPDC5-209ENST00000448753 NCAPD3P42695 1498 aa15.62■□□□□ 0.09
DEPDC5-209ENST00000448753 CUX2O14529 1486 aa15.61■□□□□ 0.09
DEPDC5-209ENST00000448753 CCNB3Q8WWL7 1395 aa15.59■□□□□ 0.09
DEPDC5-209ENST00000448753 CFTRP13569 1480 aa15.58■□□□□ 0.08
DEPDC5-209ENST00000448753 KCNH8Q96L42 1107 aa15.57■□□□□ 0.08
DEPDC5-209ENST00000448753 HMGXB3Q12766 1538 aa15.57■□□□□ 0.08
DEPDC5-209ENST00000448753 FAM50AQ14320 339 aaKnown RBP15.56■□□□□ 0.08
DEPDC5-209ENST00000448753 RRBP1Q9P2E9 1410 aaKnown RBP15.55■□□□□ 0.08
DEPDC5-209ENST00000448753 IGF1RP08069 1367 aa15.55■□□□□ 0.08
DEPDC5-209ENST00000448753 RAB3GAP2Q9H2M9 1393 aa15.53■□□□□ 0.08
DEPDC5-209ENST00000448753 SIN3AQ96ST3 1273 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms