RNA–Protein interactions for RNA: ENST00000441556.5

CTTNBP2-206, Transcript of cortactin binding protein 2, humanhuman

TSL 5

Gene CTTNBP2, Length 5,517 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTNBP2-206ENST00000441556 NISCHQ9Y2I1 1504 aa27.5■■□□□ 1.99
CTTNBP2-206ENST00000441556 DCAF8L2P0C7V8 631 aa26.97■■□□□ 1.91
CTTNBP2-206ENST00000441556 SUPT5HO00267 1087 aaKnown RBP25.72■■□□□ 1.71
CTTNBP2-206ENST00000441556 SHROOM4Q9ULL8 1493 aa25.62■■□□□ 1.69
CTTNBP2-206ENST00000441556 EHMT2Q96KQ7 1210 aa24.5■■□□□ 1.51
CTTNBP2-206ENST00000441556 FAM9AQ8IZU1 332 aaPredicted RBP24.14■■□□□ 1.45
CTTNBP2-206ENST00000441556 APLP2Q06481 763 aa23.99■■□□□ 1.43
CTTNBP2-206ENST00000441556 TRIM41Q8WV44 630 aa23.93■■□□□ 1.42
CTTNBP2-206ENST00000441556 PCGF6Q9BYE7 350 aa23.73■■□□□ 1.39
CTTNBP2-206ENST00000441556 TTBK1Q5TCY1 1321 aaPredicted RBP23.65■■□□□ 1.38
CTTNBP2-206ENST00000441556 RANGAP1P46060 587 aaPredicted RBP23.53■■□□□ 1.36
CTTNBP2-206ENST00000441556 UBTFP17480 764 aaKnown RBP23.46■■□□□ 1.35
CTTNBP2-206ENST00000441556 ABCC9O60706 1549 aa23.35■■□□□ 1.33
CTTNBP2-206ENST00000441556 ZEB1P37275 1124 aaPredicted RBP23.27■■□□□ 1.32
CTTNBP2-206ENST00000441556 CHIC1Q5VXU3 224 aa23.26■■□□□ 1.31
CTTNBP2-206ENST00000441556 ATP1B4Q9UN42 357 aaPredicted RBP23.24■■□□□ 1.31
CTTNBP2-206ENST00000441556 CCER1Q8TC90 406 aaPredicted RBP23.21■■□□□ 1.31
CTTNBP2-206ENST00000441556 PELP1Q8IZL8 1130 aaKnown RBP23.06■■□□□ 1.28
CTTNBP2-206ENST00000441556 LOC105371045A0A1W2PR82 267 aa23.02■■□□□ 1.28
CTTNBP2-206ENST00000441556 PPARGC1BQ86YN6 1023 aaKnown RBP23.01■■□□□ 1.27
CTTNBP2-206ENST00000441556 TRIM26Q12899 539 aaPredicted RBP22.99■■□□□ 1.27
CTTNBP2-206ENST00000441556 PABPN1Q86U42 306 aaKnown RBP eCLIP22.97■■□□□ 1.27
CTTNBP2-206ENST00000441556 HRCP23327 699 aa22.88■■□□□ 1.25
CTTNBP2-206ENST00000441556 ZCCHC6Q5VYS8 1495 aaKnown RBP22.86■■□□□ 1.25
CTTNBP2-206ENST00000441556 CCDC180Q9P1Z9 1646 aa22.82■■□□□ 1.24
CTTNBP2-206ENST00000441556 CENPBP07199 599 aaPredicted RBP22.76■■□□□ 1.23
CTTNBP2-206ENST00000441556 SCRIBQ14160 1630 aa22.6■■□□□ 1.21
CTTNBP2-206ENST00000441556 ITGAEP38570 1179 aa22.55■■□□□ 1.2
CTTNBP2-206ENST00000441556 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.5■■□□□ 1.19
CTTNBP2-206ENST00000441556 HNRNPUL2Q1KMD3 747 aaKnown RBP22.5■■□□□ 1.19
CTTNBP2-206ENST00000441556 YTHDC1Q96MU7 727 aaKnown RBP22.38■■□□□ 1.17
CTTNBP2-206ENST00000441556 NEFLP07196 543 aa22.2■■□□□ 1.14
CTTNBP2-206ENST00000441556 MYT1LQ9UL68 1186 aa22.19■■□□□ 1.14
CTTNBP2-206ENST00000441556 MYT1Q01538 1121 aa22.19■■□□□ 1.14
CTTNBP2-206ENST00000441556 CSRNP3Q8WYN3 585 aa22.16■■□□□ 1.14
CTTNBP2-206ENST00000441556 FAM50AQ14320 339 aaKnown RBP22.14■■□□□ 1.13
CTTNBP2-206ENST00000441556 RB1CC1Q8TDY2 1594 aa22.12■■□□□ 1.13
CTTNBP2-206ENST00000441556 NACADO15069 1562 aa22.01■■□□□ 1.11
CTTNBP2-206ENST00000441556 POLR3GLQ9BT43 218 aa22.01■■□□□ 1.11
CTTNBP2-206ENST00000441556 ERICH6Q7L0X2 663 aa22■■□□□ 1.11
CTTNBP2-206ENST00000441556 RSF1Q96T23 1441 aaPredicted RBP21.91■■□□□ 1.1
CTTNBP2-206ENST00000441556 FBLN2P98095 1184 aa21.9■■□□□ 1.1
CTTNBP2-206ENST00000441556 DIEXFQ68CQ4 756 aaKnown RBP21.9■■□□□ 1.1
CTTNBP2-206ENST00000441556 TRIM52Q96A61 297 aa21.89■■□□□ 1.09
CTTNBP2-206ENST00000441556 DCAF1Q9Y4B6 1507 aa21.88■■□□□ 1.09
CTTNBP2-206ENST00000441556 P3H3Q8IVL6 736 aa21.86■■□□□ 1.09
CTTNBP2-206ENST00000441556 NEUROD1Q13562 356 aa21.81■■□□□ 1.08
CTTNBP2-206ENST00000441556 CNGB1Q14028 1251 aaPredicted RBP21.75■■□□□ 1.07
CTTNBP2-206ENST00000441556 ARID3CA6NKF2 412 aa21.66■■□□□ 1.06
CTTNBP2-206ENST00000441556 MYO15BQ96JP2 1530 aa21.61■■□□□ 1.05
CTTNBP2-206ENST00000441556 BAZ1BQ9UIG0 1483 aaKnown RBP21.58■■□□□ 1.05
CTTNBP2-206ENST00000441556 ZNF316A6NFI3 1004 aaPredicted RBP21.58■■□□□ 1.04
CTTNBP2-206ENST00000441556 BAZ1AQ9NRL2 1556 aaPredicted RBP21.57■■□□□ 1.04
CTTNBP2-206ENST00000441556 CDK11AQ9UQ88 783 aaPredicted RBP21.55■■□□□ 1.04
CTTNBP2-206ENST00000441556 SLC4A1APQ9BWU0 796 aaKnown RBP21.53■■□□□ 1.04
CTTNBP2-206ENST00000441556 EEA1Q15075 1411 aa21.52■■□□□ 1.04
CTTNBP2-206ENST00000441556 ZNF326Q5BKZ1 582 aaKnown RBP21.52■■□□□ 1.04
CTTNBP2-206ENST00000441556 CECR2Q9BXF3 1484 aa21.52■■□□□ 1.03
CTTNBP2-206ENST00000441556 GTF3C3Q9Y5Q9 886 aa21.51■■□□□ 1.03
CTTNBP2-206ENST00000441556 WRNQ14191 1432 aaPredicted RBP eCLIP21.49■■□□□ 1.03
CTTNBP2-206ENST00000441556 ZNF777Q9ULD5 760 aaPredicted RBP21.47■■□□□ 1.03
CTTNBP2-206ENST00000441556 CLIP1P30622 1438 aa21.46■■□□□ 1.03
CTTNBP2-206ENST00000441556 ANP32CO43423 234 aa21.45■■□□□ 1.03
CTTNBP2-206ENST00000441556 GOLGA3Q08378 1498 aa21.44■■□□□ 1.02
CTTNBP2-206ENST00000441556 ACIN1Q9UKV3 1341 aaKnown RBP21.38■■□□□ 1.01
CTTNBP2-206ENST00000441556 CEP162Q5TB80 1403 aa21.37■■□□□ 1.01
CTTNBP2-206ENST00000441556 MROH2BQ7Z745 1585 aa21.29■■□□□ 1
CTTNBP2-206ENST00000441556 DAXXQ9UER7 740 aaPredicted RBP21.28■■□□□ 1
CTTNBP2-206ENST00000441556 KIF27Q86VH2 1401 aa21.28■■□□□ 1
CTTNBP2-206ENST00000441556 TNIKQ9UKE5 1360 aa21.26■□□□□ 0.99
CTTNBP2-206ENST00000441556 CEP164Q9UPV0 1460 aa21.26■□□□□ 0.99
CTTNBP2-206ENST00000441556 MTUS2Q5JR59 1369 aa21.26■□□□□ 0.99
CTTNBP2-206ENST00000441556 TONSLQ96HA7 1378 aa21.26■□□□□ 0.99
CTTNBP2-206ENST00000441556 CHMP7Q8WUX9 453 aaPredicted RBP21.24■□□□□ 0.99
CTTNBP2-206ENST00000441556 CHIC2Q9UKJ5 165 aa21.19■□□□□ 0.98
CTTNBP2-206ENST00000441556 CCDC88BA6NC98 1476 aa21.15■□□□□ 0.98
CTTNBP2-206ENST00000441556 BCANQ96GW7 911 aa21.11■□□□□ 0.97
CTTNBP2-206ENST00000441556 NPM1P06748 294 aaKnown RBP eCLIP21.1■□□□□ 0.97
CTTNBP2-206ENST00000441556 SMARCA2P51531 1590 aa21.09■□□□□ 0.97
CTTNBP2-206ENST00000441556 SOGA1O94964 1423 aa21.06■□□□□ 0.96
CTTNBP2-206ENST00000441556 CLSPNQ9HAW4 1339 aa21.04■□□□□ 0.96
CTTNBP2-206ENST00000441556 TSPY4P0CV99 314 aa21.03■□□□□ 0.96
CTTNBP2-206ENST00000441556 TSPY10P0CW01 314 aa21.03■□□□□ 0.96
CTTNBP2-206ENST00000441556 WIZO95785 1651 aa21.02■□□□□ 0.96
CTTNBP2-206ENST00000441556 TOP2AP11388 1531 aaKnown RBP21.01■□□□□ 0.95
CTTNBP2-206ENST00000441556 SCAF1Q9H7N4 1312 aaKnown RBP21.01■□□□□ 0.95
CTTNBP2-206ENST00000441556 ABCC8Q09428 1581 aa21.01■□□□□ 0.95
CTTNBP2-206ENST00000441556 DDX10Q13206 875 aaKnown RBP20.99■□□□□ 0.95
CTTNBP2-206ENST00000441556 CUX2O14529 1486 aa20.97■□□□□ 0.95
CTTNBP2-206ENST00000441556 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.97■□□□□ 0.95
CTTNBP2-206ENST00000441556 RRP7BPQ9NSQ0 103 aa20.95■□□□□ 0.94
CTTNBP2-206ENST00000441556 ERCC6Q03468 1493 aa20.94■□□□□ 0.94
CTTNBP2-206ENST00000441556 CHGAP10645 457 aaKnown RBP20.94■□□□□ 0.94
CTTNBP2-206ENST00000441556 CARMIL1Q5VZK9 1371 aa20.93■□□□□ 0.94
CTTNBP2-206ENST00000441556 PLEKHD1A6NEE1 506 aa20.91■□□□□ 0.94
CTTNBP2-206ENST00000441556 ESF1Q9H501 851 aaKnown RBP20.91■□□□□ 0.94
CTTNBP2-206ENST00000441556 FHAD1B1AJZ9 1412 aa20.85■□□□□ 0.93
CTTNBP2-206ENST00000441556 STAG3Q9UJ98 1225 aa20.84■□□□□ 0.93
CTTNBP2-206ENST00000441556 NEFMP07197 916 aa20.84■□□□□ 0.93
CTTNBP2-206ENST00000441556 SMARCA4P51532 1647 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms