RNA–Protein interactions for RNA: ENST00000440125.5

STRC-203, Transcript of stereocilin, humanhuman

TSL 1 (best)

Gene STRC, Length 4,291 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-203ENST00000440125 NISCHQ9Y2I1 1504 aa20.49■□□□□ 0.87
STRC-203ENST00000440125 DCAF8L2P0C7V8 631 aa19.31■□□□□ 0.68
STRC-203ENST00000440125 SUPT5HO00267 1087 aaKnown RBP19.08■□□□□ 0.64
STRC-203ENST00000440125 SHROOM4Q9ULL8 1493 aa18.93■□□□□ 0.62
STRC-203ENST00000440125 PCGF6Q9BYE7 350 aa18.21■□□□□ 0.51
STRC-203ENST00000440125 EHMT2Q96KQ7 1210 aa18.14■□□□□ 0.49
STRC-203ENST00000440125 FAM9AQ8IZU1 332 aaPredicted RBP17.87■□□□□ 0.45
STRC-203ENST00000440125 ABCC9O60706 1549 aa17.8■□□□□ 0.44
STRC-203ENST00000440125 HRCP23327 699 aa17.73■□□□□ 0.43
STRC-203ENST00000440125 CHIC1Q5VXU3 224 aa17.67■□□□□ 0.42
STRC-203ENST00000440125 TRIM41Q8WV44 630 aa17.58■□□□□ 0.41
STRC-203ENST00000440125 TTBK1Q5TCY1 1321 aaPredicted RBP17.57■□□□□ 0.4
STRC-203ENST00000440125 LOC105371045A0A1W2PR82 267 aa17.56■□□□□ 0.4
STRC-203ENST00000440125 PPARGC1BQ86YN6 1023 aaKnown RBP17.52■□□□□ 0.4
STRC-203ENST00000440125 ZEB1P37275 1124 aaPredicted RBP17.5■□□□□ 0.39
STRC-203ENST00000440125 TRIM26Q12899 539 aaPredicted RBP17.44■□□□□ 0.38
STRC-203ENST00000440125 CCER1Q8TC90 406 aaPredicted RBP17.38■□□□□ 0.37
STRC-203ENST00000440125 PABPN1Q86U42 306 aaKnown RBP eCLIP17.29■□□□□ 0.36
STRC-203ENST00000440125 APLP2Q06481 763 aa17.25■□□□□ 0.35
STRC-203ENST00000440125 CENPBP07199 599 aaPredicted RBP17.22■□□□□ 0.35
STRC-203ENST00000440125 CCDC180Q9P1Z9 1646 aa17.22■□□□□ 0.35
STRC-203ENST00000440125 PELP1Q8IZL8 1130 aaKnown RBP17.18■□□□□ 0.34
STRC-203ENST00000440125 RANGAP1P46060 587 aaPredicted RBP17.14■□□□□ 0.33
STRC-203ENST00000440125 UBTFP17480 764 aaKnown RBP17.1■□□□□ 0.33
STRC-203ENST00000440125 YTHDC1Q96MU7 727 aaKnown RBP17.05■□□□□ 0.32
STRC-203ENST00000440125 ZCCHC6Q5VYS8 1495 aaKnown RBP17■□□□□ 0.31
STRC-203ENST00000440125 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.95■□□□□ 0.3
STRC-203ENST00000440125 SCRIBQ14160 1630 aa16.82■□□□□ 0.28
STRC-203ENST00000440125 MYO15BQ96JP2 1530 aa16.82■□□□□ 0.28
STRC-203ENST00000440125 HNRNPUL2Q1KMD3 747 aaKnown RBP16.77■□□□□ 0.27
STRC-203ENST00000440125 DIEXFQ68CQ4 756 aaKnown RBP16.77■□□□□ 0.27
STRC-203ENST00000440125 DCAF1Q9Y4B6 1507 aa16.69■□□□□ 0.26
STRC-203ENST00000440125 ATP1B4Q9UN42 357 aaPredicted RBP16.67■□□□□ 0.26
STRC-203ENST00000440125 RB1CC1Q8TDY2 1594 aa16.63■□□□□ 0.25
STRC-203ENST00000440125 GTF3C3Q9Y5Q9 886 aa16.61■□□□□ 0.25
STRC-203ENST00000440125 MYT1Q01538 1121 aa16.6■□□□□ 0.25
STRC-203ENST00000440125 ITGAEP38570 1179 aa16.57■□□□□ 0.24
STRC-203ENST00000440125 NACADO15069 1562 aa16.54■□□□□ 0.24
STRC-203ENST00000440125 ACIN1Q9UKV3 1341 aaKnown RBP16.5■□□□□ 0.23
STRC-203ENST00000440125 NEFLP07196 543 aa16.48■□□□□ 0.23
STRC-203ENST00000440125 ERICH6Q7L0X2 663 aa16.42■□□□□ 0.22
STRC-203ENST00000440125 SCAF1Q9H7N4 1312 aaKnown RBP16.41■□□□□ 0.22
STRC-203ENST00000440125 ZNF316A6NFI3 1004 aaPredicted RBP16.41■□□□□ 0.22
STRC-203ENST00000440125 NEUROD1Q13562 356 aa16.34■□□□□ 0.21
STRC-203ENST00000440125 CSRNP3Q8WYN3 585 aa16.32■□□□□ 0.2
STRC-203ENST00000440125 RSF1Q96T23 1441 aaPredicted RBP16.22■□□□□ 0.19
STRC-203ENST00000440125 CECR2Q9BXF3 1484 aa16.22■□□□□ 0.19
STRC-203ENST00000440125 BCANQ96GW7 911 aa16.17■□□□□ 0.18
STRC-203ENST00000440125 FAM50AQ14320 339 aaKnown RBP16.14■□□□□ 0.17
STRC-203ENST00000440125 CNGB1Q14028 1251 aaPredicted RBP16.08■□□□□ 0.17
STRC-203ENST00000440125 MIER1Q8N108 512 aa16.06■□□□□ 0.16
STRC-203ENST00000440125 POLR3GLQ9BT43 218 aa16.05■□□□□ 0.16
STRC-203ENST00000440125 MROH2BQ7Z745 1585 aa15.95■□□□□ 0.14
STRC-203ENST00000440125 CEP162Q5TB80 1403 aa15.95■□□□□ 0.14
STRC-203ENST00000440125 ANP32CO43423 234 aa15.93■□□□□ 0.14
STRC-203ENST00000440125 BAZ1BQ9UIG0 1483 aaKnown RBP15.93■□□□□ 0.14
STRC-203ENST00000440125 BAZ1AQ9NRL2 1556 aaPredicted RBP15.92■□□□□ 0.14
STRC-203ENST00000440125 P3H3Q8IVL6 736 aa15.92■□□□□ 0.14
STRC-203ENST00000440125 FBLN2P98095 1184 aa15.88■□□□□ 0.13
STRC-203ENST00000440125 TRIM52Q96A61 297 aa15.86■□□□□ 0.13
STRC-203ENST00000440125 DDX10Q13206 875 aaKnown RBP15.85■□□□□ 0.13
STRC-203ENST00000440125 CLIP1P30622 1438 aa15.84■□□□□ 0.13
STRC-203ENST00000440125 FKBP8Q14318 412 aa15.84■□□□□ 0.13
STRC-203ENST00000440125 TNIKQ9UKE5 1360 aa15.8■□□□□ 0.12
STRC-203ENST00000440125 CLSPNQ9HAW4 1339 aa15.77■□□□□ 0.11
STRC-203ENST00000440125 GOLGA3Q08378 1498 aa15.76■□□□□ 0.11
STRC-203ENST00000440125 CDK11AQ9UQ88 783 aaPredicted RBP15.75■□□□□ 0.11
STRC-203ENST00000440125 EEA1Q15075 1411 aa15.74■□□□□ 0.11
STRC-203ENST00000440125 SOGA1O94964 1423 aa15.73■□□□□ 0.11
STRC-203ENST00000440125 HIRIP3Q9BW71 556 aaPredicted RBP15.73■□□□□ 0.11
STRC-203ENST00000440125 WIZO95785 1651 aa15.72■□□□□ 0.11
STRC-203ENST00000440125 WRNQ14191 1432 aaPredicted RBP eCLIP15.69■□□□□ 0.1
STRC-203ENST00000440125 ZNF326Q5BKZ1 582 aaKnown RBP15.68■□□□□ 0.1
STRC-203ENST00000440125 ATAD2BQ9ULI0 1458 aa15.67■□□□□ 0.1
STRC-203ENST00000440125 ARID3CA6NKF2 412 aa15.66■□□□□ 0.1
STRC-203ENST00000440125 HNRNPUQ00839 825 aaKnown RBP eCLIP15.65■□□□□ 0.1
STRC-203ENST00000440125 DAXXQ9UER7 740 aaPredicted RBP15.64■□□□□ 0.09
STRC-203ENST00000440125 CCDC88BA6NC98 1476 aa15.64■□□□□ 0.09
STRC-203ENST00000440125 TONSLQ96HA7 1378 aa15.64■□□□□ 0.09
STRC-203ENST00000440125 RTL5Q5HYW3 569 aaPredicted RBP15.63■□□□□ 0.09
STRC-203ENST00000440125 SMARCA4P51532 1647 aa15.62■□□□□ 0.09
STRC-203ENST00000440125 SMARCA2P51531 1590 aa15.62■□□□□ 0.09
STRC-203ENST00000440125 ABCC8Q09428 1581 aa15.62■□□□□ 0.09
STRC-203ENST00000440125 CEP164Q9UPV0 1460 aa15.6■□□□□ 0.09
STRC-203ENST00000440125 DNAJC5BQ9UF47 199 aa15.6■□□□□ 0.09
STRC-203ENST00000440125 BICRAQ9NZM4 1560 aa15.57■□□□□ 0.08
STRC-203ENST00000440125 ERCC6Q03468 1493 aa15.57■□□□□ 0.08
STRC-203ENST00000440125 IRX6P78412 446 aaPredicted RBP15.56■□□□□ 0.08
STRC-203ENST00000440125 SUPT16HQ9Y5B9 1047 aaKnown RBP15.56■□□□□ 0.08
STRC-203ENST00000440125 EIF4G1Q04637 1599 aaKnown RBP15.56■□□□□ 0.08
STRC-203ENST00000440125 FAM9BQ8IZU0 186 aa15.54■□□□□ 0.08
STRC-203ENST00000440125 CHIC2Q9UKJ5 165 aa15.52■□□□□ 0.08
STRC-203ENST00000440125 SIN3AQ96ST3 1273 aa15.51■□□□□ 0.07
STRC-203ENST00000440125 MYT1LQ9UL68 1186 aa15.49■□□□□ 0.07
STRC-203ENST00000440125 TOP2AP11388 1531 aaKnown RBP15.49■□□□□ 0.07
STRC-203ENST00000440125 VPS8Q8N3P4 1428 aa15.45■□□□□ 0.06
STRC-203ENST00000440125 KANK4Q5T7N3 995 aaPredicted RBP15.45■□□□□ 0.06
STRC-203ENST00000440125 CADPSQ9ULU8 1353 aa15.44■□□□□ 0.06
STRC-203ENST00000440125 ANP32EQ9BTT0 268 aa15.43■□□□□ 0.06
STRC-203ENST00000440125 CHMP7Q8WUX9 453 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms