RNA–Protein interactions for RNA: ENST00000435676.2

FAM78B-203, Transcript of family with sequence similarity 78 member B, humanhuman

TSL 2

Gene FAM78B, Length 4,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78B-203ENST00000435676 NISCHQ9Y2I1 1504 aa17.62■□□□□ 0.41
FAM78B-203ENST00000435676 DCAF8L2P0C7V8 631 aa16.99■□□□□ 0.31
FAM78B-203ENST00000435676 SHROOM4Q9ULL8 1493 aa15.69■□□□□ 0.1
FAM78B-203ENST00000435676 SUPT5HO00267 1087 aaKnown RBP15.61■□□□□ 0.09
FAM78B-203ENST00000435676 ABCC9O60706 1549 aa15.33■□□□□ 0.04
FAM78B-203ENST00000435676 FAM9AQ8IZU1 332 aaPredicted RBP14.99□□□□□ -0.01
FAM78B-203ENST00000435676 CCDC180Q9P1Z9 1646 aa14.95□□□□□ -0.02
FAM78B-203ENST00000435676 PABPN1Q86U42 306 aaKnown RBP eCLIP14.87□□□□□ -0.03
FAM78B-203ENST00000435676 APLP2Q06481 763 aa14.71□□□□□ -0.05
FAM78B-203ENST00000435676 TRIM41Q8WV44 630 aa14.67□□□□□ -0.06
FAM78B-203ENST00000435676 EHMT2Q96KQ7 1210 aa14.67□□□□□ -0.06
FAM78B-203ENST00000435676 RB1CC1Q8TDY2 1594 aa14.58□□□□□ -0.08
FAM78B-203ENST00000435676 ZCCHC6Q5VYS8 1495 aaKnown RBP14.58□□□□□ -0.08
FAM78B-203ENST00000435676 NACADO15069 1562 aa14.48□□□□□ -0.09
FAM78B-203ENST00000435676 SCRIBQ14160 1630 aa14.46□□□□□ -0.09
FAM78B-203ENST00000435676 UBTFP17480 764 aaKnown RBP14.42□□□□□ -0.1
FAM78B-203ENST00000435676 RANGAP1P46060 587 aaPredicted RBP14.36□□□□□ -0.11
FAM78B-203ENST00000435676 ATP1B4Q9UN42 357 aaPredicted RBP14.34□□□□□ -0.11
FAM78B-203ENST00000435676 DCAF1Q9Y4B6 1507 aa14.22□□□□□ -0.13
FAM78B-203ENST00000435676 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.11□□□□□ -0.15
FAM78B-203ENST00000435676 HNRNPUL2Q1KMD3 747 aaKnown RBP14.11□□□□□ -0.15
FAM78B-203ENST00000435676 TTBK1Q5TCY1 1321 aaPredicted RBP14.08□□□□□ -0.16
FAM78B-203ENST00000435676 FBLN2P98095 1184 aa14.04□□□□□ -0.16
FAM78B-203ENST00000435676 MYO15BQ96JP2 1530 aa14.03□□□□□ -0.16
FAM78B-203ENST00000435676 CHIC1Q5VXU3 224 aa14.03□□□□□ -0.16
FAM78B-203ENST00000435676 MYT1LQ9UL68 1186 aa13.97□□□□□ -0.17
FAM78B-203ENST00000435676 BAZ1BQ9UIG0 1483 aaKnown RBP13.93□□□□□ -0.18
FAM78B-203ENST00000435676 BAZ1AQ9NRL2 1556 aaPredicted RBP13.89□□□□□ -0.19
FAM78B-203ENST00000435676 RSF1Q96T23 1441 aaPredicted RBP13.82□□□□□ -0.2
FAM78B-203ENST00000435676 ERCC6Q03468 1493 aa13.79□□□□□ -0.2
FAM78B-203ENST00000435676 CSRNP3Q8WYN3 585 aa13.78□□□□□ -0.2
FAM78B-203ENST00000435676 PCGF6Q9BYE7 350 aa13.75□□□□□ -0.21
FAM78B-203ENST00000435676 SMARCA2P51531 1590 aa13.73□□□□□ -0.21
FAM78B-203ENST00000435676 NPM1P06748 294 aaKnown RBP eCLIP13.73□□□□□ -0.21
FAM78B-203ENST00000435676 CHMP7Q8WUX9 453 aaPredicted RBP13.71□□□□□ -0.21
FAM78B-203ENST00000435676 LOC105371045A0A1W2PR82 267 aa13.71□□□□□ -0.22
FAM78B-203ENST00000435676 CECR2Q9BXF3 1484 aa13.69□□□□□ -0.22
FAM78B-203ENST00000435676 CDK11AQ9UQ88 783 aaPredicted RBP13.68□□□□□ -0.22
FAM78B-203ENST00000435676 CCER1Q8TC90 406 aaPredicted RBP13.68□□□□□ -0.22
FAM78B-203ENST00000435676 ITGAEP38570 1179 aa13.65□□□□□ -0.22
FAM78B-203ENST00000435676 PDS5BQ9NTI5 1447 aa13.63□□□□□ -0.23
FAM78B-203ENST00000435676 ZEB1P37275 1124 aaPredicted RBP13.63□□□□□ -0.23
FAM78B-203ENST00000435676 PPARGC1BQ86YN6 1023 aaKnown RBP13.63□□□□□ -0.23
FAM78B-203ENST00000435676 P3H3Q8IVL6 736 aa13.57□□□□□ -0.24
FAM78B-203ENST00000435676 WRNQ14191 1432 aaPredicted RBP eCLIP13.56□□□□□ -0.24
FAM78B-203ENST00000435676 TRIM26Q12899 539 aaPredicted RBP13.55□□□□□ -0.24
FAM78B-203ENST00000435676 FAM50AQ14320 339 aaKnown RBP13.55□□□□□ -0.24
FAM78B-203ENST00000435676 MROH2BQ7Z745 1585 aa13.53□□□□□ -0.24
FAM78B-203ENST00000435676 EEA1Q15075 1411 aa13.51□□□□□ -0.25
FAM78B-203ENST00000435676 KIF27Q86VH2 1401 aa13.5□□□□□ -0.25
FAM78B-203ENST00000435676 ATAD2BQ9ULI0 1458 aa13.49□□□□□ -0.25
FAM78B-203ENST00000435676 ARID3CA6NKF2 412 aa13.47□□□□□ -0.25
FAM78B-203ENST00000435676 CADPSQ9ULU8 1353 aa13.47□□□□□ -0.25
FAM78B-203ENST00000435676 ESF1Q9H501 851 aaKnown RBP13.43□□□□□ -0.26
FAM78B-203ENST00000435676 TRIM52Q96A61 297 aa13.41□□□□□ -0.26
FAM78B-203ENST00000435676 SMARCA4P51532 1647 aa13.41□□□□□ -0.26
FAM78B-203ENST00000435676 TOP2AP11388 1531 aaKnown RBP13.41□□□□□ -0.26
FAM78B-203ENST00000435676 CCDC88BA6NC98 1476 aa13.4□□□□□ -0.26
FAM78B-203ENST00000435676 ZNF777Q9ULD5 760 aaPredicted RBP13.39□□□□□ -0.27
FAM78B-203ENST00000435676 EIF4G1Q04637 1599 aaKnown RBP13.35□□□□□ -0.27
FAM78B-203ENST00000435676 NCAPD3P42695 1498 aa13.34□□□□□ -0.27
FAM78B-203ENST00000435676 CEP164Q9UPV0 1460 aa13.34□□□□□ -0.27
FAM78B-203ENST00000435676 PELP1Q8IZL8 1130 aaKnown RBP13.33□□□□□ -0.28
FAM78B-203ENST00000435676 CUX2O14529 1486 aa13.32□□□□□ -0.28
FAM78B-203ENST00000435676 SOGA1O94964 1423 aa13.31□□□□□ -0.28
FAM78B-203ENST00000435676 PLEKHD1A6NEE1 506 aa13.31□□□□□ -0.28
FAM78B-203ENST00000435676 ABCC8Q09428 1581 aa13.3□□□□□ -0.28
FAM78B-203ENST00000435676 GOLGA3Q08378 1498 aa13.29□□□□□ -0.28
FAM78B-203ENST00000435676 MTUS2Q5JR59 1369 aa13.28□□□□□ -0.28
FAM78B-203ENST00000435676 WIZO95785 1651 aa13.28□□□□□ -0.28
FAM78B-203ENST00000435676 CARMIL1Q5VZK9 1371 aa13.27□□□□□ -0.29
FAM78B-203ENST00000435676 CLIP1P30622 1438 aa13.26□□□□□ -0.29
FAM78B-203ENST00000435676 MYT1Q01538 1121 aa13.25□□□□□ -0.29
FAM78B-203ENST00000435676 TSPY4P0CV99 314 aa13.25□□□□□ -0.29
FAM78B-203ENST00000435676 TSPY10P0CW01 314 aa13.25□□□□□ -0.29
FAM78B-203ENST00000435676 FANCD2Q9BXW9 1451 aa13.25□□□□□ -0.29
FAM78B-203ENST00000435676 TDRD9Q8NDG6 1382 aaKnown RBP13.22□□□□□ -0.29
FAM78B-203ENST00000435676 KCNH8Q96L42 1107 aa13.22□□□□□ -0.29
FAM78B-203ENST00000435676 POLR3GLQ9BT43 218 aa13.22□□□□□ -0.29
FAM78B-203ENST00000435676 CARMIL2Q6F5E8 1435 aa13.2□□□□□ -0.3
FAM78B-203ENST00000435676 BCANQ96GW7 911 aa13.2□□□□□ -0.3
FAM78B-203ENST00000435676 STAG3Q9UJ98 1225 aa13.17□□□□□ -0.3
FAM78B-203ENST00000435676 CC2D2AQ9P2K1 1620 aa13.16□□□□□ -0.3
FAM78B-203ENST00000435676 SLC4A1APQ9BWU0 796 aaKnown RBP13.15□□□□□ -0.3
FAM78B-203ENST00000435676 TRHP20396 242 aaPredicted RBP13.15□□□□□ -0.3
FAM78B-203ENST00000435676 TNIKQ9UKE5 1360 aa13.13□□□□□ -0.31
FAM78B-203ENST00000435676 HMGXB3Q12766 1538 aa13.12□□□□□ -0.31
FAM78B-203ENST00000435676 OSCARQ8IYS5 282 aa13.11□□□□□ -0.31
FAM78B-203ENST00000435676 FHAD1B1AJZ9 1412 aa13.11□□□□□ -0.31
FAM78B-203ENST00000435676 ACIN1Q9UKV3 1341 aaKnown RBP13.11□□□□□ -0.31
FAM78B-203ENST00000435676 NEUROD1Q13562 356 aa13.09□□□□□ -0.31
FAM78B-203ENST00000435676 ZNF326Q5BKZ1 582 aaKnown RBP13.08□□□□□ -0.32
FAM78B-203ENST00000435676 CFDP1Q9UEE9 299 aaPredicted RBP13.08□□□□□ -0.32
FAM78B-203ENST00000435676 CEP162Q5TB80 1403 aa13.07□□□□□ -0.32
FAM78B-203ENST00000435676 BICRAQ9NZM4 1560 aa13.07□□□□□ -0.32
FAM78B-203ENST00000435676 CHGAP10645 457 aaKnown RBP13.06□□□□□ -0.32
FAM78B-203ENST00000435676 PLPPR3Q6T4P5 718 aa13.06□□□□□ -0.32
FAM78B-203ENST00000435676 ARID4BQ4LE39 1312 aaPredicted RBP13.04□□□□□ -0.32
FAM78B-203ENST00000435676 CENPBP07199 599 aaPredicted RBP13.03□□□□□ -0.32
FAM78B-203ENST00000435676 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms