RNA–Protein interactions for RNA: ENST00000435165.2

SGIP1-206, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SGIP1, Length 3,646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-206ENST00000435165 NISCHQ9Y2I1 1504 aa7.84□□□□□ -1.15
SGIP1-206ENST00000435165 SLC24A1O60721 1099 aa7.61□□□□□ -1.19
SGIP1-206ENST00000435165 AEBP2Q6ZN18 517 aaPredicted RBP7.59□□□□□ -1.19
SGIP1-206ENST00000435165 CCDC180Q9P1Z9 1646 aa7.46□□□□□ -1.21
SGIP1-206ENST00000435165 CHIC1Q5VXU3 224 aa7.2□□□□□ -1.26
SGIP1-206ENST00000435165 ABCC9O60706 1549 aa7.13□□□□□ -1.27
SGIP1-206ENST00000435165 SHROOM4Q9ULL8 1493 aa7.11□□□□□ -1.27
SGIP1-206ENST00000435165 RB1CC1Q8TDY2 1594 aa7.07□□□□□ -1.28
SGIP1-206ENST00000435165 MYO15BQ96JP2 1530 aa7.05□□□□□ -1.28
SGIP1-206ENST00000435165 DAXXQ9UER7 740 aaPredicted RBP7.04□□□□□ -1.28
SGIP1-206ENST00000435165 MYT1Q01538 1121 aa7.04□□□□□ -1.28
SGIP1-206ENST00000435165 NACADO15069 1562 aa7.03□□□□□ -1.28
SGIP1-206ENST00000435165 TTBK1Q5TCY1 1321 aaPredicted RBP7.02□□□□□ -1.29
SGIP1-206ENST00000435165 APLP2Q06481 763 aa6.94□□□□□ -1.3
SGIP1-206ENST00000435165 PELP1Q8IZL8 1130 aaKnown RBP6.94□□□□□ -1.3
SGIP1-206ENST00000435165 PRKCSHP14314 528 aaPredicted RBP6.91□□□□□ -1.3
SGIP1-206ENST00000435165 UNC13AQ9UPW8 1703 aa6.8□□□□□ -1.32
SGIP1-206ENST00000435165 DNAJC5BQ9UF47 199 aa6.8□□□□□ -1.32
SGIP1-206ENST00000435165 NCBP3Q53F19 620 aaKnown RBP6.79□□□□□ -1.32
SGIP1-206ENST00000435165 DCAF1Q9Y4B6 1507 aa6.78□□□□□ -1.32
SGIP1-206ENST00000435165 ERICH6Q7L0X2 663 aa6.78□□□□□ -1.32
SGIP1-206ENST00000435165 BICRAQ9NZM4 1560 aa6.77□□□□□ -1.33
SGIP1-206ENST00000435165 PLPPR3Q6T4P5 718 aa6.73□□□□□ -1.33
SGIP1-206ENST00000435165 EHMT2Q96KQ7 1210 aa6.73□□□□□ -1.33
SGIP1-206ENST00000435165 DNAJC5Q9H3Z4 198 aa6.72□□□□□ -1.33
SGIP1-206ENST00000435165 RTN4Q9NQC3 1192 aaKnown RBP6.7□□□□□ -1.34
SGIP1-206ENST00000435165 CUX2O14529 1486 aa6.7□□□□□ -1.34
SGIP1-206ENST00000435165 CC2D2AQ9P2K1 1620 aa6.64□□□□□ -1.35
SGIP1-206ENST00000435165 POTEDQ86YR6 584 aa6.63□□□□□ -1.35
SGIP1-206ENST00000435165 CECR2Q9BXF3 1484 aa6.61□□□□□ -1.35
SGIP1-206ENST00000435165 EIF4G1Q04637 1599 aaKnown RBP6.61□□□□□ -1.35
SGIP1-206ENST00000435165 ARXQ96QS3 562 aa6.57□□□□□ -1.36
SGIP1-206ENST00000435165 PHF23Q9BUL5 403 aaPredicted RBP6.56□□□□□ -1.36
SGIP1-206ENST00000435165 AMER1Q5JTC6 1135 aaPredicted RBP6.51□□□□□ -1.37
SGIP1-206ENST00000435165 ZCCHC6Q5VYS8 1495 aaKnown RBP6.49□□□□□ -1.37
SGIP1-206ENST00000435165 TIMELESSQ9UNS1 1208 aa6.47□□□□□ -1.37
SGIP1-206ENST00000435165 EIF5BO60841 1220 aaKnown RBP6.42□□□□□ -1.38
SGIP1-206ENST00000435165 HMGXB3Q12766 1538 aa6.42□□□□□ -1.38
SGIP1-206ENST00000435165 NCAPD3P42695 1498 aa6.4□□□□□ -1.38
SGIP1-206ENST00000435165 SMARCA2P51531 1590 aa6.39□□□□□ -1.39
SGIP1-206ENST00000435165 KCNA4P22459 653 aa6.38□□□□□ -1.39
SGIP1-206ENST00000435165 PABPN1Q86U42 306 aaKnown RBP eCLIP6.38□□□□□ -1.39
SGIP1-206ENST00000435165 THOC2Q8NI27 1593 aaKnown RBP6.36□□□□□ -1.39
SGIP1-206ENST00000435165 LAMC3Q9Y6N6 1575 aa6.35□□□□□ -1.39
SGIP1-206ENST00000435165 RANGAP1P46060 587 aaPredicted RBP6.35□□□□□ -1.39
SGIP1-206ENST00000435165 SENP3Q9H4L4 574 aaPredicted RBP6.35□□□□□ -1.39
SGIP1-206ENST00000435165 PEG3Q9GZU2 1588 aa6.34□□□□□ -1.39
SGIP1-206ENST00000435165 KLHL34Q8N239 644 aa6.34□□□□□ -1.39
SGIP1-206ENST00000435165 SCRIBQ14160 1630 aa6.31□□□□□ -1.4
SGIP1-206ENST00000435165 TULP1O00294 542 aaPredicted RBP6.31□□□□□ -1.4
SGIP1-206ENST00000435165 HOMEZQ8IX15 550 aa6.31□□□□□ -1.4
SGIP1-206ENST00000435165 CSRNP3Q8WYN3 585 aa6.29□□□□□ -1.4
SGIP1-206ENST00000435165 TAOK2Q9UL54 1235 aa6.28□□□□□ -1.4
SGIP1-206ENST00000435165 ERCC6Q03468 1493 aa6.27□□□□□ -1.41
SGIP1-206ENST00000435165 WDR62O43379 1518 aa6.25□□□□□ -1.41
SGIP1-206ENST00000435165 PLEKHG5O94827 1062 aa6.25□□□□□ -1.41
SGIP1-206ENST00000435165 BCL11AQ9H165 835 aa6.25□□□□□ -1.41
SGIP1-206ENST00000435165 ATAD2BQ9ULI0 1458 aa6.22□□□□□ -1.41
SGIP1-206ENST00000435165 PDS5BQ9NTI5 1447 aa6.21□□□□□ -1.42
SGIP1-206ENST00000435165 PODXL2Q9NZ53 605 aa6.2□□□□□ -1.42
SGIP1-206ENST00000435165 SMARCA4P51532 1647 aa6.2□□□□□ -1.42
SGIP1-206ENST00000435165 BAZ1AQ9NRL2 1556 aaPredicted RBP6.19□□□□□ -1.42
SGIP1-206ENST00000435165 MRC2Q9UBG0 1479 aa6.18□□□□□ -1.42
SGIP1-206ENST00000435165 WDR97A6NE52 1622 aa6.17□□□□□ -1.42
SGIP1-206ENST00000435165 KIF21AQ7Z4S6 1674 aa6.14□□□□□ -1.43
SGIP1-206ENST00000435165 BCANQ96GW7 911 aa6.14□□□□□ -1.43
SGIP1-206ENST00000435165 TPRNQ4KMQ1 711 aa6.13□□□□□ -1.43
SGIP1-206ENST00000435165 PRDM2Q13029 1718 aa6.13□□□□□ -1.43
SGIP1-206ENST00000435165 FAM9AQ8IZU1 332 aaPredicted RBP6.13□□□□□ -1.43
SGIP1-206ENST00000435165 BAZ1BQ9UIG0 1483 aaKnown RBP6.11□□□□□ -1.43
SGIP1-206ENST00000435165 GTF3C3Q9Y5Q9 886 aa6.1□□□□□ -1.43
SGIP1-206ENST00000435165 NPM2Q86SE8 214 aaKnown RBP6.08□□□□□ -1.44
SGIP1-206ENST00000435165 RSF1Q96T23 1441 aaPredicted RBP6.08□□□□□ -1.44
SGIP1-206ENST00000435165 RIMBP3CA6NJZ7 1639 aa6.08□□□□□ -1.44
SGIP1-206ENST00000435165 RIMBP3BA6NNM3 1639 aa6.08□□□□□ -1.44
SGIP1-206ENST00000435165 RIMBP3Q9UFD9 1639 aa6.08□□□□□ -1.44
SGIP1-206ENST00000435165 CADPSQ9ULU8 1353 aa6.06□□□□□ -1.44
SGIP1-206ENST00000435165 ABCC8Q09428 1581 aa6.05□□□□□ -1.44
SGIP1-206ENST00000435165 CEP164Q9UPV0 1460 aa6.04□□□□□ -1.44
SGIP1-206ENST00000435165 DCAF8L2P0C7V8 631 aa6.03□□□□□ -1.44
SGIP1-206ENST00000435165 IFT140Q96RY7 1462 aa6.02□□□□□ -1.45
SGIP1-206ENST00000435165 NESP48681 1621 aa6.02□□□□□ -1.45
SGIP1-206ENST00000435165 OSCARQ8IYS5 282 aa6.01□□□□□ -1.45
SGIP1-206ENST00000435165 PLCB2Q00722 1185 aa6.01□□□□□ -1.45
SGIP1-206ENST00000435165 ARHGEF11O15085 1522 aa6□□□□□ -1.45
SGIP1-206ENST00000435165 FBXO3Q9UK99 471 aa6□□□□□ -1.45
SGIP1-206ENST00000435165 CFTRP13569 1480 aa6□□□□□ -1.45
SGIP1-206ENST00000435165 C14orf37Q86TY3 774 aa5.99□□□□□ -1.45
SGIP1-206ENST00000435165 LOC105371045A0A1W2PR82 267 aa5.98□□□□□ -1.45
SGIP1-206ENST00000435165 UBE2Q2Q8WVN8 375 aa5.98□□□□□ -1.45
SGIP1-206ENST00000435165 TMEM132AQ24JP5 1023 aa5.98□□□□□ -1.45
SGIP1-206ENST00000435165 PDIA4P13667 645 aaKnown RBP5.97□□□□□ -1.45
SGIP1-206ENST00000435165 FANCD2Q9BXW9 1451 aa5.95□□□□□ -1.46
SGIP1-206ENST00000435165 CLASP1Q7Z460 1538 aa5.95□□□□□ -1.46
SGIP1-206ENST00000435165 TRIM26Q12899 539 aaPredicted RBP5.94□□□□□ -1.46
SGIP1-206ENST00000435165 MSH5O43196 834 aa5.93□□□□□ -1.46
SGIP1-206ENST00000435165 HRCP23327 699 aa5.93□□□□□ -1.46
SGIP1-206ENST00000435165 TRIM41Q8WV44 630 aa5.92□□□□□ -1.46
SGIP1-206ENST00000435165 URB2Q14146 1524 aaKnown RBP5.91□□□□□ -1.46
SGIP1-206ENST00000435165 DNMBPQ6XZF7 1577 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms