RNA–Protein interactions for RNA: ENST00000431567.5

PROM2-204, Transcript of prominin 2, humanhuman

TSL 2

Gene PROM2, Length 3,767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2-204ENST00000431567 NISCHQ9Y2I1 1504 aa20.5■□□□□ 0.87
PROM2-204ENST00000431567 DCAF8L2P0C7V8 631 aa19.15■□□□□ 0.66
PROM2-204ENST00000431567 SHROOM4Q9ULL8 1493 aa19.08■□□□□ 0.65
PROM2-204ENST00000431567 SUPT5HO00267 1087 aaKnown RBP18.96■□□□□ 0.63
PROM2-204ENST00000431567 EHMT2Q96KQ7 1210 aa18.1■□□□□ 0.49
PROM2-204ENST00000431567 PCGF6Q9BYE7 350 aa17.92■□□□□ 0.46
PROM2-204ENST00000431567 FAM9AQ8IZU1 332 aaPredicted RBP17.77■□□□□ 0.43
PROM2-204ENST00000431567 CHIC1Q5VXU3 224 aa17.7■□□□□ 0.42
PROM2-204ENST00000431567 LOC105371045A0A1W2PR82 267 aa17.68■□□□□ 0.42
PROM2-204ENST00000431567 PPARGC1BQ86YN6 1023 aaKnown RBP17.51■□□□□ 0.39
PROM2-204ENST00000431567 TTBK1Q5TCY1 1321 aaPredicted RBP17.43■□□□□ 0.38
PROM2-204ENST00000431567 HRCP23327 699 aa17.37■□□□□ 0.37
PROM2-204ENST00000431567 TRIM41Q8WV44 630 aa17.34■□□□□ 0.37
PROM2-204ENST00000431567 MYO15BQ96JP2 1530 aa17.22■□□□□ 0.35
PROM2-204ENST00000431567 ZCCHC6Q5VYS8 1495 aaKnown RBP17.16■□□□□ 0.34
PROM2-204ENST00000431567 TRIM26Q12899 539 aaPredicted RBP17.04■□□□□ 0.32
PROM2-204ENST00000431567 RANGAP1P46060 587 aaPredicted RBP17.03■□□□□ 0.32
PROM2-204ENST00000431567 ABCC9O60706 1549 aa16.88■□□□□ 0.29
PROM2-204ENST00000431567 CCER1Q8TC90 406 aaPredicted RBP16.87■□□□□ 0.29
PROM2-204ENST00000431567 PELP1Q8IZL8 1130 aaKnown RBP16.86■□□□□ 0.29
PROM2-204ENST00000431567 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.8■□□□□ 0.28
PROM2-204ENST00000431567 UBTFP17480 764 aaKnown RBP16.79■□□□□ 0.28
PROM2-204ENST00000431567 CCDC180Q9P1Z9 1646 aa16.76■□□□□ 0.27
PROM2-204ENST00000431567 SCRIBQ14160 1630 aa16.69■□□□□ 0.26
PROM2-204ENST00000431567 ZEB1P37275 1124 aaPredicted RBP16.67■□□□□ 0.26
PROM2-204ENST00000431567 PABPN1Q86U42 306 aaKnown RBP eCLIP16.67■□□□□ 0.26
PROM2-204ENST00000431567 YTHDC1Q96MU7 727 aaKnown RBP16.58■□□□□ 0.25
PROM2-204ENST00000431567 APLP2Q06481 763 aa16.55■□□□□ 0.24
PROM2-204ENST00000431567 HNRNPUL2Q1KMD3 747 aaKnown RBP16.54■□□□□ 0.24
PROM2-204ENST00000431567 RSF1Q96T23 1441 aaPredicted RBP16.53■□□□□ 0.24
PROM2-204ENST00000431567 MYT1Q01538 1121 aa16.52■□□□□ 0.23
PROM2-204ENST00000431567 DCAF1Q9Y4B6 1507 aa16.5■□□□□ 0.23
PROM2-204ENST00000431567 CECR2Q9BXF3 1484 aa16.38■□□□□ 0.21
PROM2-204ENST00000431567 ITGAEP38570 1179 aa16.35■□□□□ 0.21
PROM2-204ENST00000431567 ATP1B4Q9UN42 357 aaPredicted RBP16.33■□□□□ 0.2
PROM2-204ENST00000431567 DIEXFQ68CQ4 756 aaKnown RBP16.32■□□□□ 0.2
PROM2-204ENST00000431567 CENPBP07199 599 aaPredicted RBP16.27■□□□□ 0.2
PROM2-204ENST00000431567 RB1CC1Q8TDY2 1594 aa16.26■□□□□ 0.19
PROM2-204ENST00000431567 CSRNP3Q8WYN3 585 aa16.22■□□□□ 0.19
PROM2-204ENST00000431567 SCAF1Q9H7N4 1312 aaKnown RBP16.19■□□□□ 0.18
PROM2-204ENST00000431567 GTF3C3Q9Y5Q9 886 aa16.16■□□□□ 0.18
PROM2-204ENST00000431567 MROH2BQ7Z745 1585 aa16.13■□□□□ 0.17
PROM2-204ENST00000431567 NEUROD1Q13562 356 aa16.11■□□□□ 0.17
PROM2-204ENST00000431567 ACIN1Q9UKV3 1341 aaKnown RBP16.03■□□□□ 0.16
PROM2-204ENST00000431567 SOGA1O94964 1423 aa16.01■□□□□ 0.15
PROM2-204ENST00000431567 ZNF316A6NFI3 1004 aaPredicted RBP15.99■□□□□ 0.15
PROM2-204ENST00000431567 ABCC8Q09428 1581 aa15.98■□□□□ 0.15
PROM2-204ENST00000431567 WIZO95785 1651 aa15.96■□□□□ 0.15
PROM2-204ENST00000431567 CEP162Q5TB80 1403 aa15.95■□□□□ 0.14
PROM2-204ENST00000431567 CCDC88BA6NC98 1476 aa15.95■□□□□ 0.14
PROM2-204ENST00000431567 P3H3Q8IVL6 736 aa15.95■□□□□ 0.14
PROM2-204ENST00000431567 MIER1Q8N108 512 aa15.89■□□□□ 0.13
PROM2-204ENST00000431567 NACADO15069 1562 aa15.87■□□□□ 0.13
PROM2-204ENST00000431567 FAM50AQ14320 339 aaKnown RBP15.85■□□□□ 0.13
PROM2-204ENST00000431567 RUSC2Q8N2Y8 1516 aa15.85■□□□□ 0.13
PROM2-204ENST00000431567 CNGB1Q14028 1251 aaPredicted RBP15.8■□□□□ 0.12
PROM2-204ENST00000431567 BCANQ96GW7 911 aa15.76■□□□□ 0.11
PROM2-204ENST00000431567 CLIP1P30622 1438 aa15.76■□□□□ 0.11
PROM2-204ENST00000431567 WRNQ14191 1432 aaPredicted RBP eCLIP15.75■□□□□ 0.11
PROM2-204ENST00000431567 BAZ1AQ9NRL2 1556 aaPredicted RBP15.74■□□□□ 0.11
PROM2-204ENST00000431567 TNIKQ9UKE5 1360 aa15.74■□□□□ 0.11
PROM2-204ENST00000431567 HIRIP3Q9BW71 556 aaPredicted RBP15.73■□□□□ 0.11
PROM2-204ENST00000431567 ARID3CA6NKF2 412 aa15.72■□□□□ 0.11
PROM2-204ENST00000431567 GOLGA3Q08378 1498 aa15.65■□□□□ 0.1
PROM2-204ENST00000431567 KANK4Q5T7N3 995 aaPredicted RBP15.64■□□□□ 0.09
PROM2-204ENST00000431567 DDX10Q13206 875 aaKnown RBP15.58■□□□□ 0.09
PROM2-204ENST00000431567 POLR3GLQ9BT43 218 aa15.58■□□□□ 0.08
PROM2-204ENST00000431567 BAZ1BQ9UIG0 1483 aaKnown RBP15.54■□□□□ 0.08
PROM2-204ENST00000431567 TOP2AP11388 1531 aaKnown RBP15.52■□□□□ 0.07
PROM2-204ENST00000431567 EEA1Q15075 1411 aa15.51■□□□□ 0.07
PROM2-204ENST00000431567 SIN3AQ96ST3 1273 aa15.51■□□□□ 0.07
PROM2-204ENST00000431567 NEFLP07196 543 aa15.5■□□□□ 0.07
PROM2-204ENST00000431567 CEP164Q9UPV0 1460 aa15.5■□□□□ 0.07
PROM2-204ENST00000431567 RAPGEF2Q9Y4G8 1499 aa15.49■□□□□ 0.07
PROM2-204ENST00000431567 TRIM52Q96A61 297 aa15.49■□□□□ 0.07
PROM2-204ENST00000431567 SMARCA4P51532 1647 aa15.47■□□□□ 0.07
PROM2-204ENST00000431567 CHIC2Q9UKJ5 165 aa15.45■□□□□ 0.06
PROM2-204ENST00000431567 SMARCA2P51531 1590 aa15.45■□□□□ 0.06
PROM2-204ENST00000431567 KCNH8Q96L42 1107 aa15.42■□□□□ 0.06
PROM2-204ENST00000431567 VPS8Q8N3P4 1428 aa15.42■□□□□ 0.06
PROM2-204ENST00000431567 FKBP8Q14318 412 aa15.38■□□□□ 0.05
PROM2-204ENST00000431567 SENP3-EIF4A1A0A087X0R7 540 aa15.37■□□□□ 0.05
PROM2-204ENST00000431567 ZNF326Q5BKZ1 582 aaKnown RBP15.37■□□□□ 0.05
PROM2-204ENST00000431567 ANP32CO43423 234 aa15.34■□□□□ 0.05
PROM2-204ENST00000431567 ATAD2BQ9ULI0 1458 aa15.34■□□□□ 0.05
PROM2-204ENST00000431567 IRX6P78412 446 aaPredicted RBP15.33■□□□□ 0.04
PROM2-204ENST00000431567 FBLN2P98095 1184 aa15.31■□□□□ 0.04
PROM2-204ENST00000431567 KIF27Q86VH2 1401 aa15.31■□□□□ 0.04
PROM2-204ENST00000431567 RRP7BPQ9NSQ0 103 aa15.31■□□□□ 0.04
PROM2-204ENST00000431567 CCNB3Q8WWL7 1395 aa15.27■□□□□ 0.04
PROM2-204ENST00000431567 CUX2O14529 1486 aa15.26■□□□□ 0.03
PROM2-204ENST00000431567 SYNJ1O43426 1573 aa15.25■□□□□ 0.03
PROM2-204ENST00000431567 SUPT16HQ9Y5B9 1047 aaKnown RBP15.25■□□□□ 0.03
PROM2-204ENST00000431567 DHX57Q6P158 1386 aaKnown RBP15.24■□□□□ 0.03
PROM2-204ENST00000431567 ZNF777Q9ULD5 760 aaPredicted RBP15.24■□□□□ 0.03
PROM2-204ENST00000431567 ERICH6Q7L0X2 663 aa15.24■□□□□ 0.03
PROM2-204ENST00000431567 TONSLQ96HA7 1378 aa15.22■□□□□ 0.03
PROM2-204ENST00000431567 HNRNPUQ00839 825 aaKnown RBP eCLIP15.22■□□□□ 0.03
PROM2-204ENST00000431567 CARMIL1Q5VZK9 1371 aa15.21■□□□□ 0.03
PROM2-204ENST00000431567 RAB3GAP2Q9H2M9 1393 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms