RNA–Protein interactions for RNA: ENST00000429014.1

CFTR-203, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

TSL 5

Gene CFTR, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-203ENST00000429014 AEBP2Q6ZN18 517 aaPredicted RBP19.62■□□□□ 0.73
CFTR-203ENST00000429014 CHIC1Q5VXU3 224 aa18.71■□□□□ 0.59
CFTR-203ENST00000429014 SENP3Q9H4L4 574 aaPredicted RBP16.74■□□□□ 0.27
CFTR-203ENST00000429014 PHF23Q9BUL5 403 aaPredicted RBP16.53■□□□□ 0.24
CFTR-203ENST00000429014 FOXD1Q16676 465 aa15.59■□□□□ 0.09
CFTR-203ENST00000429014 PLPPR3Q6T4P5 718 aa14.97□□□□□ -0.01
CFTR-203ENST00000429014 PPP6R1Q9UPN7 881 aa14.62□□□□□ -0.07
CFTR-203ENST00000429014 MSH5O43196 834 aa14.58□□□□□ -0.08
CFTR-203ENST00000429014 ADRA2BP18089 450 aa14.56□□□□□ -0.08
CFTR-203ENST00000429014 PIAS4Q8N2W9 510 aaPredicted RBP14.56□□□□□ -0.08
CFTR-203ENST00000429014 POTEDQ86YR6 584 aa14.12□□□□□ -0.15
CFTR-203ENST00000429014 NISCHQ9Y2I1 1504 aa14.09□□□□□ -0.15
CFTR-203ENST00000429014 SCAF1Q9H7N4 1312 aaKnown RBP13.36□□□□□ -0.27
CFTR-203ENST00000429014 MAPK8IP2Q13387 824 aaPredicted RBP13.35□□□□□ -0.27
CFTR-203ENST00000429014 DMRT2Q9Y5R5 561 aa13.29□□□□□ -0.28
CFTR-203ENST00000429014 PPP4R3CPQ6ZMV5 832 aa13.12□□□□□ -0.31
CFTR-203ENST00000429014 CNKSR2Q8WXI2 1034 aa12.88□□□□□ -0.35
CFTR-203ENST00000429014 HOXD11P31277 338 aaPredicted RBP12.84□□□□□ -0.35
CFTR-203ENST00000429014 ABCC9O60706 1549 aa12.81□□□□□ -0.36
CFTR-203ENST00000429014 RNF216Q9NWF9 866 aaPredicted RBP12.75□□□□□ -0.37
CFTR-203ENST00000429014 CCDC180Q9P1Z9 1646 aa12.72□□□□□ -0.37
CFTR-203ENST00000429014 DCAF8L1A6NGE4 600 aa12.67□□□□□ -0.38
CFTR-203ENST00000429014 NCBP3Q53F19 620 aaKnown RBP12.64□□□□□ -0.39
CFTR-203ENST00000429014 CACNB1Q02641 598 aaPredicted RBP12.45□□□□□ -0.42
CFTR-203ENST00000429014 NPM3O75607 178 aaKnown RBP12.44□□□□□ -0.42
CFTR-203ENST00000429014 RNF39Q9H2S5 420 aa12.44□□□□□ -0.42
CFTR-203ENST00000429014 DNAJC5BQ9UF47 199 aa12.44□□□□□ -0.42
CFTR-203ENST00000429014 C1QBPQ07021 282 aaKnown RBP12.28□□□□□ -0.44
CFTR-203ENST00000429014 KCNA4P22459 653 aa12.24□□□□□ -0.45
CFTR-203ENST00000429014 RB1CC1Q8TDY2 1594 aa12.19□□□□□ -0.46
CFTR-203ENST00000429014 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.19□□□□□ -0.46
CFTR-203ENST00000429014 DCAF8L2P0C7V8 631 aa12.08□□□□□ -0.48
CFTR-203ENST00000429014 NACADO15069 1562 aa12.05□□□□□ -0.48
CFTR-203ENST00000429014 U3KPZ7 1027 aaPredicted RBP11.95□□□□□ -0.5
CFTR-203ENST00000429014 PABPN1Q86U42 306 aaKnown RBP eCLIP11.9□□□□□ -0.5
CFTR-203ENST00000429014 SLC4A2P04920 1241 aa11.88□□□□□ -0.51
CFTR-203ENST00000429014 MYO15BQ96JP2 1530 aa11.81□□□□□ -0.52
CFTR-203ENST00000429014 UNC13AQ9UPW8 1703 aa11.81□□□□□ -0.52
CFTR-203ENST00000429014 SPINK5Q9NQ38 1064 aaPredicted RBP11.74□□□□□ -0.53
CFTR-203ENST00000429014 CAPN15O75808 1086 aa11.72□□□□□ -0.53
CFTR-203ENST00000429014 BICRAQ9NZM4 1560 aa11.69□□□□□ -0.54
CFTR-203ENST00000429014 DSG3P32926 999 aa11.67□□□□□ -0.54
CFTR-203ENST00000429014 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.66□□□□□ -0.54
CFTR-203ENST00000429014 HNRNPUL2Q1KMD3 747 aaKnown RBP11.66□□□□□ -0.54
CFTR-203ENST00000429014 ZCCHC6Q5VYS8 1495 aaKnown RBP11.65□□□□□ -0.54
CFTR-203ENST00000429014 SHROOM4Q9ULL8 1493 aa11.65□□□□□ -0.54
CFTR-203ENST00000429014 APLP2Q06481 763 aa11.65□□□□□ -0.54
CFTR-203ENST00000429014 DCAF1Q9Y4B6 1507 aa11.62□□□□□ -0.55
CFTR-203ENST00000429014 SCRIBQ14160 1630 aa11.6□□□□□ -0.55
CFTR-203ENST00000429014 SAMD1Q6SPF0 538 aaPredicted RBP11.58□□□□□ -0.56
CFTR-203ENST00000429014 SLC4A1APQ9BWU0 796 aaKnown RBP11.57□□□□□ -0.56
CFTR-203ENST00000429014 CECR2Q9BXF3 1484 aa11.56□□□□□ -0.56
CFTR-203ENST00000429014 ZNF219Q9P2Y4 722 aaPredicted RBP11.55□□□□□ -0.56
CFTR-203ENST00000429014 CC2D2AQ9P2K1 1620 aa11.55□□□□□ -0.56
CFTR-203ENST00000429014 TRHP20396 242 aaPredicted RBP11.53□□□□□ -0.56
CFTR-203ENST00000429014 MYCNP04198 464 aaPredicted RBP11.51□□□□□ -0.57
CFTR-203ENST00000429014 EIF4G1Q04637 1599 aaKnown RBP11.5□□□□□ -0.57
CFTR-203ENST00000429014 ABCB7O75027 752 aa11.43□□□□□ -0.58
CFTR-203ENST00000429014 FOXD4L1Q9NU39 408 aa11.42□□□□□ -0.58
CFTR-203ENST00000429014 POLA2Q14181 598 aa11.26□□□□□ -0.61
CFTR-203ENST00000429014 ZBTB22O15209 634 aa11.25□□□□□ -0.61
CFTR-203ENST00000429014 ATF5Q9Y2D1 282 aaPredicted RBP11.22□□□□□ -0.61
CFTR-203ENST00000429014 ERCC6Q03468 1493 aa11.17□□□□□ -0.62
CFTR-203ENST00000429014 RBM42Q9BTD8 480 aaKnown RBP11.14□□□□□ -0.63
CFTR-203ENST00000429014 DNAJC5Q9H3Z4 198 aa11.12□□□□□ -0.63
CFTR-203ENST00000429014 ATXN8OSP0DMR3 200 aa11.1□□□□□ -0.63
CFTR-203ENST00000429014 CUX2O14529 1486 aa11.1□□□□□ -0.63
CFTR-203ENST00000429014 POTEHQ6S545 545 aa11.08□□□□□ -0.64
CFTR-203ENST00000429014 SMARCA2P51531 1590 aa11.07□□□□□ -0.64
CFTR-203ENST00000429014 NCAPD3P42695 1498 aa11.07□□□□□ -0.64
CFTR-203ENST00000429014 ZBTB12Q9Y330 459 aaPredicted RBP11.06□□□□□ -0.64
CFTR-203ENST00000429014 ATAD2BQ9ULI0 1458 aa11.04□□□□□ -0.64
CFTR-203ENST00000429014 SMARCA4P51532 1647 aa11.03□□□□□ -0.64
CFTR-203ENST00000429014 HMGXB3Q12766 1538 aa11.03□□□□□ -0.64
CFTR-203ENST00000429014 BAZ1BQ9UIG0 1483 aaKnown RBP11.01□□□□□ -0.65
CFTR-203ENST00000429014 BAZ1AQ9NRL2 1556 aaPredicted RBP11□□□□□ -0.65
CFTR-203ENST00000429014 NESP48681 1621 aa10.92□□□□□ -0.66
CFTR-203ENST00000429014 LAMC3Q9Y6N6 1575 aa10.9□□□□□ -0.66
CFTR-203ENST00000429014 AKT1S1Q96B36 256 aa10.9□□□□□ -0.66
CFTR-203ENST00000429014 PDS5BQ9NTI5 1447 aa10.89□□□□□ -0.67
CFTR-203ENST00000429014 OSCARQ8IYS5 282 aa10.88□□□□□ -0.67
CFTR-203ENST00000429014 PEG3Q9GZU2 1588 aa10.87□□□□□ -0.67
CFTR-203ENST00000429014 CHRDL2Q6WN34 429 aa10.86□□□□□ -0.67
CFTR-203ENST00000429014 THOC2Q8NI27 1593 aaKnown RBP10.84□□□□□ -0.67
CFTR-203ENST00000429014 MROH2BQ7Z745 1585 aa10.83□□□□□ -0.68
CFTR-203ENST00000429014 KIF21AQ7Z4S6 1674 aa10.81□□□□□ -0.68
CFTR-203ENST00000429014 FBLN2P98095 1184 aa10.8□□□□□ -0.68
CFTR-203ENST00000429014 CSRNP3Q8WYN3 585 aa10.8□□□□□ -0.68
CFTR-203ENST00000429014 REM2Q8IYK8 340 aaPredicted RBP10.78□□□□□ -0.68
CFTR-203ENST00000429014 CADPSQ9ULU8 1353 aa10.77□□□□□ -0.68
CFTR-203ENST00000429014 MRC2Q9UBG0 1479 aa10.76□□□□□ -0.69
CFTR-203ENST00000429014 SPDYE2BA6NHP3 402 aa10.73□□□□□ -0.69
CFTR-203ENST00000429014 SPDYE6P0CI01 402 aa10.73□□□□□ -0.69
CFTR-203ENST00000429014 SPDYE2Q495Y8 402 aa10.73□□□□□ -0.69
CFTR-203ENST00000429014 TRIM41Q8WV44 630 aa10.73□□□□□ -0.69
CFTR-203ENST00000429014 CEP164Q9UPV0 1460 aa10.73□□□□□ -0.69
CFTR-203ENST00000429014 WIZO95785 1651 aa10.73□□□□□ -0.69
CFTR-203ENST00000429014 MKRN4PQ13434 485 aaPredicted RBP10.72□□□□□ -0.69
CFTR-203ENST00000429014 WDR62O43379 1518 aa10.7□□□□□ -0.7
CFTR-203ENST00000429014 FANCD2Q9BXW9 1451 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms