RNA–Protein interactions for RNA: ENST00000424778.1

SDK2-203, Transcript of sidekick cell adhesion molecule 2, humanhuman

TSL 5

Gene SDK2, Length 4,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDK2-203ENST00000424778 NISCHQ9Y2I1 1504 aa20.66■□□□□ 0.9
SDK2-203ENST00000424778 DCAF8L2P0C7V8 631 aa20.36■□□□□ 0.85
SDK2-203ENST00000424778 SUPT5HO00267 1087 aaKnown RBP19.01■□□□□ 0.63
SDK2-203ENST00000424778 SHROOM4Q9ULL8 1493 aa18.99■□□□□ 0.63
SDK2-203ENST00000424778 EHMT2Q96KQ7 1210 aa18.05■□□□□ 0.48
SDK2-203ENST00000424778 PCGF6Q9BYE7 350 aa17.99■□□□□ 0.47
SDK2-203ENST00000424778 ABCC9O60706 1549 aa17.89■□□□□ 0.46
SDK2-203ENST00000424778 PELP1Q8IZL8 1130 aaKnown RBP17.89■□□□□ 0.45
SDK2-203ENST00000424778 FAM9AQ8IZU1 332 aaPredicted RBP17.83■□□□□ 0.44
SDK2-203ENST00000424778 APLP2Q06481 763 aa17.78■□□□□ 0.44
SDK2-203ENST00000424778 TRIM41Q8WV44 630 aa17.69■□□□□ 0.42
SDK2-203ENST00000424778 HRCP23327 699 aa17.69■□□□□ 0.42
SDK2-203ENST00000424778 ZEB1P37275 1124 aaPredicted RBP17.61■□□□□ 0.41
SDK2-203ENST00000424778 PABPN1Q86U42 306 aaKnown RBP eCLIP17.57■□□□□ 0.4
SDK2-203ENST00000424778 MYT1Q01538 1121 aa17.5■□□□□ 0.39
SDK2-203ENST00000424778 CENPBP07199 599 aaPredicted RBP17.47■□□□□ 0.39
SDK2-203ENST00000424778 RANGAP1P46060 587 aaPredicted RBP17.47■□□□□ 0.39
SDK2-203ENST00000424778 UBTFP17480 764 aaKnown RBP17.38■□□□□ 0.37
SDK2-203ENST00000424778 TTBK1Q5TCY1 1321 aaPredicted RBP17.33■□□□□ 0.36
SDK2-203ENST00000424778 ATP1B4Q9UN42 357 aaPredicted RBP17.28■□□□□ 0.36
SDK2-203ENST00000424778 TRIM26Q12899 539 aaPredicted RBP17.27■□□□□ 0.35
SDK2-203ENST00000424778 PPARGC1BQ86YN6 1023 aaKnown RBP17.27■□□□□ 0.35
SDK2-203ENST00000424778 CCER1Q8TC90 406 aaPredicted RBP17.23■□□□□ 0.35
SDK2-203ENST00000424778 CHIC1Q5VXU3 224 aa17.17■□□□□ 0.34
SDK2-203ENST00000424778 CCDC180Q9P1Z9 1646 aa17.16■□□□□ 0.34
SDK2-203ENST00000424778 ZCCHC6Q5VYS8 1495 aaKnown RBP17.09■□□□□ 0.33
SDK2-203ENST00000424778 LOC105371045A0A1W2PR82 267 aa17■□□□□ 0.31
SDK2-203ENST00000424778 YTHDC1Q96MU7 727 aaKnown RBP16.98■□□□□ 0.31
SDK2-203ENST00000424778 SCRIBQ14160 1630 aa16.96■□□□□ 0.31
SDK2-203ENST00000424778 ERICH6Q7L0X2 663 aa16.93■□□□□ 0.3
SDK2-203ENST00000424778 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.86■□□□□ 0.29
SDK2-203ENST00000424778 HNRNPUL2Q1KMD3 747 aaKnown RBP16.86■□□□□ 0.29
SDK2-203ENST00000424778 RB1CC1Q8TDY2 1594 aa16.79■□□□□ 0.28
SDK2-203ENST00000424778 DIEXFQ68CQ4 756 aaKnown RBP16.69■□□□□ 0.26
SDK2-203ENST00000424778 NACADO15069 1562 aa16.68■□□□□ 0.26
SDK2-203ENST00000424778 NEFLP07196 543 aa16.66■□□□□ 0.26
SDK2-203ENST00000424778 GTF3C3Q9Y5Q9 886 aa16.65■□□□□ 0.26
SDK2-203ENST00000424778 FBLN2P98095 1184 aa16.64■□□□□ 0.25
SDK2-203ENST00000424778 ITGAEP38570 1179 aa16.63■□□□□ 0.25
SDK2-203ENST00000424778 MYT1LQ9UL68 1186 aa16.63■□□□□ 0.25
SDK2-203ENST00000424778 ACIN1Q9UKV3 1341 aaKnown RBP16.57■□□□□ 0.24
SDK2-203ENST00000424778 CSRNP3Q8WYN3 585 aa16.51■□□□□ 0.23
SDK2-203ENST00000424778 DCAF1Q9Y4B6 1507 aa16.49■□□□□ 0.23
SDK2-203ENST00000424778 SCAF1Q9H7N4 1312 aaKnown RBP16.42■□□□□ 0.22
SDK2-203ENST00000424778 RSF1Q96T23 1441 aaPredicted RBP16.39■□□□□ 0.21
SDK2-203ENST00000424778 P3H3Q8IVL6 736 aa16.35■□□□□ 0.21
SDK2-203ENST00000424778 FAM50AQ14320 339 aaKnown RBP16.34■□□□□ 0.21
SDK2-203ENST00000424778 ZNF316A6NFI3 1004 aaPredicted RBP16.29■□□□□ 0.2
SDK2-203ENST00000424778 BAZ1BQ9UIG0 1483 aaKnown RBP16.27■□□□□ 0.2
SDK2-203ENST00000424778 NEUROD1Q13562 356 aa16.27■□□□□ 0.2
SDK2-203ENST00000424778 MYO15BQ96JP2 1530 aa16.27■□□□□ 0.19
SDK2-203ENST00000424778 ARID3CA6NKF2 412 aa16.24■□□□□ 0.19
SDK2-203ENST00000424778 CECR2Q9BXF3 1484 aa16.23■□□□□ 0.19
SDK2-203ENST00000424778 BAZ1AQ9NRL2 1556 aaPredicted RBP16.21■□□□□ 0.19
SDK2-203ENST00000424778 TRIM52Q96A61 297 aa16.16■□□□□ 0.18
SDK2-203ENST00000424778 CDK11AQ9UQ88 783 aaPredicted RBP16.15■□□□□ 0.18
SDK2-203ENST00000424778 CHMP7Q8WUX9 453 aaPredicted RBP16.13■□□□□ 0.17
SDK2-203ENST00000424778 POLR3GLQ9BT43 218 aa16.12■□□□□ 0.17
SDK2-203ENST00000424778 BCANQ96GW7 911 aa16.1■□□□□ 0.17
SDK2-203ENST00000424778 DAXXQ9UER7 740 aaPredicted RBP16.07■□□□□ 0.16
SDK2-203ENST00000424778 NPM1P06748 294 aaKnown RBP eCLIP16.06■□□□□ 0.16
SDK2-203ENST00000424778 WRNQ14191 1432 aaPredicted RBP eCLIP16.05■□□□□ 0.16
SDK2-203ENST00000424778 CLSPNQ9HAW4 1339 aa16.05■□□□□ 0.16
SDK2-203ENST00000424778 EEA1Q15075 1411 aa16.05■□□□□ 0.16
SDK2-203ENST00000424778 ZNF777Q9ULD5 760 aaPredicted RBP16.04■□□□□ 0.16
SDK2-203ENST00000424778 MROH2BQ7Z745 1585 aa15.99■□□□□ 0.15
SDK2-203ENST00000424778 ERCC6Q03468 1493 aa15.98■□□□□ 0.15
SDK2-203ENST00000424778 RTL5Q5HYW3 569 aaPredicted RBP15.97■□□□□ 0.15
SDK2-203ENST00000424778 CNGB1Q14028 1251 aaPredicted RBP15.93■□□□□ 0.14
SDK2-203ENST00000424778 KIF27Q86VH2 1401 aa15.91■□□□□ 0.14
SDK2-203ENST00000424778 SMARCA2P51531 1590 aa15.9■□□□□ 0.14
SDK2-203ENST00000424778 SLC4A1APQ9BWU0 796 aaKnown RBP15.88■□□□□ 0.13
SDK2-203ENST00000424778 ZNF326Q5BKZ1 582 aaKnown RBP15.87■□□□□ 0.13
SDK2-203ENST00000424778 CLIP1P30622 1438 aa15.86■□□□□ 0.13
SDK2-203ENST00000424778 MIER1Q8N108 512 aa15.85■□□□□ 0.13
SDK2-203ENST00000424778 ANP32CO43423 234 aa15.85■□□□□ 0.13
SDK2-203ENST00000424778 CCDC88BA6NC98 1476 aa15.83■□□□□ 0.13
SDK2-203ENST00000424778 MTUS2Q5JR59 1369 aa15.82■□□□□ 0.12
SDK2-203ENST00000424778 PDS5BQ9NTI5 1447 aa15.8■□□□□ 0.12
SDK2-203ENST00000424778 FKBP8Q14318 412 aa15.8■□□□□ 0.12
SDK2-203ENST00000424778 ESF1Q9H501 851 aaKnown RBP15.79■□□□□ 0.12
SDK2-203ENST00000424778 GOLGA3Q08378 1498 aa15.79■□□□□ 0.12
SDK2-203ENST00000424778 ATAD2BQ9ULI0 1458 aa15.76■□□□□ 0.11
SDK2-203ENST00000424778 TSPY4P0CV99 314 aa15.76■□□□□ 0.11
SDK2-203ENST00000424778 TSPY10P0CW01 314 aa15.76■□□□□ 0.11
SDK2-203ENST00000424778 PLEKHD1A6NEE1 506 aa15.75■□□□□ 0.11
SDK2-203ENST00000424778 CHIC2Q9UKJ5 165 aa15.74■□□□□ 0.11
SDK2-203ENST00000424778 CADPSQ9ULU8 1353 aa15.74■□□□□ 0.11
SDK2-203ENST00000424778 KCNH8Q96L42 1107 aa15.73■□□□□ 0.11
SDK2-203ENST00000424778 CUX2O14529 1486 aa15.73■□□□□ 0.11
SDK2-203ENST00000424778 CEP164Q9UPV0 1460 aa15.72■□□□□ 0.11
SDK2-203ENST00000424778 ANP32EQ9BTT0 268 aa15.71■□□□□ 0.1
SDK2-203ENST00000424778 CEP162Q5TB80 1403 aa15.7■□□□□ 0.1
SDK2-203ENST00000424778 CARMIL1Q5VZK9 1371 aa15.7■□□□□ 0.1
SDK2-203ENST00000424778 WIZO95785 1651 aa15.69■□□□□ 0.1
SDK2-203ENST00000424778 TNIKQ9UKE5 1360 aa15.68■□□□□ 0.1
SDK2-203ENST00000424778 TOP2AP11388 1531 aaKnown RBP15.67■□□□□ 0.1
SDK2-203ENST00000424778 SOGA1O94964 1423 aa15.66■□□□□ 0.1
SDK2-203ENST00000424778 TDRD9Q8NDG6 1382 aaKnown RBP15.65■□□□□ 0.1
SDK2-203ENST00000424778 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms