RNA–Protein interactions for RNA: ENST00000422444.1

PGAP1-205, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 2

Gene PGAP1, Length 6,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-205ENST00000422444 NISCHQ9Y2I1 1504 aa8.25□□□□□ -1.09
PGAP1-205ENST00000422444 DCAF8L2P0C7V8 631 aa8.09□□□□□ -1.12
PGAP1-205ENST00000422444 SHROOM4Q9ULL8 1493 aa7.71□□□□□ -1.17
PGAP1-205ENST00000422444 SUPT5HO00267 1087 aaKnown RBP7.56□□□□□ -1.2
PGAP1-205ENST00000422444 EHMT2Q96KQ7 1210 aa7.39□□□□□ -1.23
PGAP1-205ENST00000422444 ABCC9O60706 1549 aa7.21□□□□□ -1.26
PGAP1-205ENST00000422444 FAM9AQ8IZU1 332 aaPredicted RBP7.13□□□□□ -1.27
PGAP1-205ENST00000422444 RANGAP1P46060 587 aaPredicted RBP7.07□□□□□ -1.28
PGAP1-205ENST00000422444 TTBK1Q5TCY1 1321 aaPredicted RBP7.07□□□□□ -1.28
PGAP1-205ENST00000422444 PABPN1Q86U42 306 aaKnown RBP eCLIP7.06□□□□□ -1.28
PGAP1-205ENST00000422444 APLP2Q06481 763 aa7.02□□□□□ -1.29
PGAP1-205ENST00000422444 SCRIBQ14160 1630 aa6.99□□□□□ -1.29
PGAP1-205ENST00000422444 CCDC180Q9P1Z9 1646 aa6.99□□□□□ -1.29
PGAP1-205ENST00000422444 TRIM41Q8WV44 630 aa6.95□□□□□ -1.3
PGAP1-205ENST00000422444 ATP1B4Q9UN42 357 aaPredicted RBP6.9□□□□□ -1.31
PGAP1-205ENST00000422444 PPARGC1BQ86YN6 1023 aaKnown RBP6.87□□□□□ -1.31
PGAP1-205ENST00000422444 ZCCHC6Q5VYS8 1495 aaKnown RBP6.86□□□□□ -1.31
PGAP1-205ENST00000422444 UBTFP17480 764 aaKnown RBP6.84□□□□□ -1.31
PGAP1-205ENST00000422444 PCGF6Q9BYE7 350 aa6.8□□□□□ -1.32
PGAP1-205ENST00000422444 LOC105371045A0A1W2PR82 267 aa6.78□□□□□ -1.32
PGAP1-205ENST00000422444 RB1CC1Q8TDY2 1594 aa6.75□□□□□ -1.33
PGAP1-205ENST00000422444 CHIC1Q5VXU3 224 aa6.72□□□□□ -1.33
PGAP1-205ENST00000422444 PELP1Q8IZL8 1130 aaKnown RBP6.66□□□□□ -1.34
PGAP1-205ENST00000422444 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.65□□□□□ -1.34
PGAP1-205ENST00000422444 HNRNPUL2Q1KMD3 747 aaKnown RBP6.65□□□□□ -1.34
PGAP1-205ENST00000422444 ITGAEP38570 1179 aa6.65□□□□□ -1.35
PGAP1-205ENST00000422444 NACADO15069 1562 aa6.65□□□□□ -1.35
PGAP1-205ENST00000422444 ZEB1P37275 1124 aaPredicted RBP6.64□□□□□ -1.35
PGAP1-205ENST00000422444 CCER1Q8TC90 406 aaPredicted RBP6.64□□□□□ -1.35
PGAP1-205ENST00000422444 MYT1LQ9UL68 1186 aa6.62□□□□□ -1.35
PGAP1-205ENST00000422444 FBLN2P98095 1184 aa6.61□□□□□ -1.35
PGAP1-205ENST00000422444 ARID3CA6NKF2 412 aa6.57□□□□□ -1.36
PGAP1-205ENST00000422444 P3H3Q8IVL6 736 aa6.56□□□□□ -1.36
PGAP1-205ENST00000422444 CECR2Q9BXF3 1484 aa6.53□□□□□ -1.36
PGAP1-205ENST00000422444 TRIM26Q12899 539 aaPredicted RBP6.52□□□□□ -1.37
PGAP1-205ENST00000422444 RSF1Q96T23 1441 aaPredicted RBP6.52□□□□□ -1.37
PGAP1-205ENST00000422444 BAZ1BQ9UIG0 1483 aaKnown RBP6.5□□□□□ -1.37
PGAP1-205ENST00000422444 WIZO95785 1651 aa6.5□□□□□ -1.37
PGAP1-205ENST00000422444 FAM50AQ14320 339 aaKnown RBP6.5□□□□□ -1.37
PGAP1-205ENST00000422444 MYO15BQ96JP2 1530 aa6.48□□□□□ -1.37
PGAP1-205ENST00000422444 DCAF1Q9Y4B6 1507 aa6.48□□□□□ -1.37
PGAP1-205ENST00000422444 CENPBP07199 599 aaPredicted RBP6.47□□□□□ -1.37
PGAP1-205ENST00000422444 MROH2BQ7Z745 1585 aa6.46□□□□□ -1.37
PGAP1-205ENST00000422444 YTHDC1Q96MU7 727 aaKnown RBP6.46□□□□□ -1.38
PGAP1-205ENST00000422444 CNGB1Q14028 1251 aaPredicted RBP6.44□□□□□ -1.38
PGAP1-205ENST00000422444 POLR3GLQ9BT43 218 aa6.44□□□□□ -1.38
PGAP1-205ENST00000422444 BAZ1AQ9NRL2 1556 aaPredicted RBP6.44□□□□□ -1.38
PGAP1-205ENST00000422444 CSRNP3Q8WYN3 585 aa6.42□□□□□ -1.38
PGAP1-205ENST00000422444 ABCC8Q09428 1581 aa6.41□□□□□ -1.38
PGAP1-205ENST00000422444 ERCC6Q03468 1493 aa6.41□□□□□ -1.38
PGAP1-205ENST00000422444 TRIM52Q96A61 297 aa6.4□□□□□ -1.39
PGAP1-205ENST00000422444 NEUROD1Q13562 356 aa6.39□□□□□ -1.39
PGAP1-205ENST00000422444 NEFLP07196 543 aa6.39□□□□□ -1.39
PGAP1-205ENST00000422444 CCDC88BA6NC98 1476 aa6.38□□□□□ -1.39
PGAP1-205ENST00000422444 ZNF777Q9ULD5 760 aaPredicted RBP6.38□□□□□ -1.39
PGAP1-205ENST00000422444 SMARCA4P51532 1647 aa6.37□□□□□ -1.39
PGAP1-205ENST00000422444 SLC4A1APQ9BWU0 796 aaKnown RBP6.36□□□□□ -1.39
PGAP1-205ENST00000422444 ERICH6Q7L0X2 663 aa6.35□□□□□ -1.39
PGAP1-205ENST00000422444 PLPPR3Q6T4P5 718 aa6.35□□□□□ -1.39
PGAP1-205ENST00000422444 WRNQ14191 1432 aaPredicted RBP eCLIP6.34□□□□□ -1.39
PGAP1-205ENST00000422444 TOP2AP11388 1531 aaKnown RBP6.34□□□□□ -1.39
PGAP1-205ENST00000422444 SMARCA2P51531 1590 aa6.34□□□□□ -1.39
PGAP1-205ENST00000422444 CHMP7Q8WUX9 453 aaPredicted RBP6.34□□□□□ -1.4
PGAP1-205ENST00000422444 HRCP23327 699 aa6.33□□□□□ -1.4
PGAP1-205ENST00000422444 CDK11AQ9UQ88 783 aaPredicted RBP6.33□□□□□ -1.4
PGAP1-205ENST00000422444 EIF4G1Q04637 1599 aaKnown RBP6.33□□□□□ -1.4
PGAP1-205ENST00000422444 ZNF326Q5BKZ1 582 aaKnown RBP6.32□□□□□ -1.4
PGAP1-205ENST00000422444 UNC13AQ9UPW8 1703 aa6.31□□□□□ -1.4
PGAP1-205ENST00000422444 NPM1P06748 294 aaKnown RBP eCLIP6.31□□□□□ -1.4
PGAP1-205ENST00000422444 SOGA1O94964 1423 aa6.3□□□□□ -1.4
PGAP1-205ENST00000422444 CHIC2Q9UKJ5 165 aa6.28□□□□□ -1.4
PGAP1-205ENST00000422444 GOLGA3Q08378 1498 aa6.27□□□□□ -1.41
PGAP1-205ENST00000422444 SENP3Q9H4L4 574 aaPredicted RBP6.27□□□□□ -1.41
PGAP1-205ENST00000422444 ATAD2BQ9ULI0 1458 aa6.27□□□□□ -1.41
PGAP1-205ENST00000422444 BCANQ96GW7 911 aa6.26□□□□□ -1.41
PGAP1-205ENST00000422444 CUX2O14529 1486 aa6.26□□□□□ -1.41
PGAP1-205ENST00000422444 ESF1Q9H501 851 aaKnown RBP6.26□□□□□ -1.41
PGAP1-205ENST00000422444 CLIP1P30622 1438 aa6.26□□□□□ -1.41
PGAP1-205ENST00000422444 CEP162Q5TB80 1403 aa6.26□□□□□ -1.41
PGAP1-205ENST00000422444 KCNH8Q96L42 1107 aa6.25□□□□□ -1.41
PGAP1-205ENST00000422444 KIF27Q86VH2 1401 aa6.24□□□□□ -1.41
PGAP1-205ENST00000422444 CC2D2AQ9P2K1 1620 aa6.24□□□□□ -1.41
PGAP1-205ENST00000422444 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.23□□□□□ -1.41
PGAP1-205ENST00000422444 EEA1Q15075 1411 aa6.23□□□□□ -1.41
PGAP1-205ENST00000422444 CEP164Q9UPV0 1460 aa6.2□□□□□ -1.42
PGAP1-205ENST00000422444 MTUS2Q5JR59 1369 aa6.2□□□□□ -1.42
PGAP1-205ENST00000422444 TDRD9Q8NDG6 1382 aaKnown RBP6.2□□□□□ -1.42
PGAP1-205ENST00000422444 CHGAP10645 457 aaKnown RBP6.19□□□□□ -1.42
PGAP1-205ENST00000422444 STAG3Q9UJ98 1225 aa6.19□□□□□ -1.42
PGAP1-205ENST00000422444 RUSC2Q8N2Y8 1516 aa6.19□□□□□ -1.42
PGAP1-205ENST00000422444 PDS5BQ9NTI5 1447 aa6.19□□□□□ -1.42
PGAP1-205ENST00000422444 DIEXFQ68CQ4 756 aaKnown RBP6.19□□□□□ -1.42
PGAP1-205ENST00000422444 FANCD2Q9BXW9 1451 aa6.19□□□□□ -1.42
PGAP1-205ENST00000422444 RRP7BPQ9NSQ0 103 aa6.19□□□□□ -1.42
PGAP1-205ENST00000422444 CARMIL1Q5VZK9 1371 aa6.18□□□□□ -1.42
PGAP1-205ENST00000422444 DAXXQ9UER7 740 aaPredicted RBP6.18□□□□□ -1.42
PGAP1-205ENST00000422444 BICRAQ9NZM4 1560 aa6.18□□□□□ -1.42
PGAP1-205ENST00000422444 ANP32CO43423 234 aa6.17□□□□□ -1.42
PGAP1-205ENST00000422444 NESP48681 1621 aa6.17□□□□□ -1.42
PGAP1-205ENST00000422444 CADPSQ9ULU8 1353 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms