RNA–Protein interactions for RNA: ENST00000415030.6

SCN4B-202, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 4,480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-202ENST00000415030 NISCHQ9Y2I1 1504 aa21.57■■□□□ 1.04
SCN4B-202ENST00000415030 DCAF8L2P0C7V8 631 aa20.06■□□□□ 0.8
SCN4B-202ENST00000415030 SUPT5HO00267 1087 aaKnown RBP19.29■□□□□ 0.68
SCN4B-202ENST00000415030 SHROOM4Q9ULL8 1493 aa19.22■□□□□ 0.67
SCN4B-202ENST00000415030 HRCP23327 699 aa18.88■□□□□ 0.61
SCN4B-202ENST00000415030 PCGF6Q9BYE7 350 aa18.76■□□□□ 0.59
SCN4B-202ENST00000415030 CHIC1Q5VXU3 224 aa18.57■□□□□ 0.56
SCN4B-202ENST00000415030 PELP1Q8IZL8 1130 aaKnown RBP18.47■□□□□ 0.55
SCN4B-202ENST00000415030 ZEB1P37275 1124 aaPredicted RBP18.42■□□□□ 0.54
SCN4B-202ENST00000415030 TRIM26Q12899 539 aaPredicted RBP18.3■□□□□ 0.52
SCN4B-202ENST00000415030 PPARGC1BQ86YN6 1023 aaKnown RBP18.26■□□□□ 0.51
SCN4B-202ENST00000415030 ZCCHC6Q5VYS8 1495 aaKnown RBP18.23■□□□□ 0.51
SCN4B-202ENST00000415030 DCAF1Q9Y4B6 1507 aa18.15■□□□□ 0.5
SCN4B-202ENST00000415030 MYO15BQ96JP2 1530 aa18.1■□□□□ 0.49
SCN4B-202ENST00000415030 LOC105371045A0A1W2PR82 267 aa18.09■□□□□ 0.49
SCN4B-202ENST00000415030 TRIM41Q8WV44 630 aa17.98■□□□□ 0.47
SCN4B-202ENST00000415030 CCDC180Q9P1Z9 1646 aa17.95■□□□□ 0.46
SCN4B-202ENST00000415030 MYT1Q01538 1121 aa17.9■□□□□ 0.46
SCN4B-202ENST00000415030 FAM9AQ8IZU1 332 aaPredicted RBP17.88■□□□□ 0.45
SCN4B-202ENST00000415030 CENPBP07199 599 aaPredicted RBP17.86■□□□□ 0.45
SCN4B-202ENST00000415030 EHMT2Q96KQ7 1210 aa17.79■□□□□ 0.44
SCN4B-202ENST00000415030 CCER1Q8TC90 406 aaPredicted RBP17.75■□□□□ 0.43
SCN4B-202ENST00000415030 ABCC9O60706 1549 aa17.64■□□□□ 0.42
SCN4B-202ENST00000415030 SCAF1Q9H7N4 1312 aaKnown RBP17.51■□□□□ 0.39
SCN4B-202ENST00000415030 ACIN1Q9UKV3 1341 aaKnown RBP17.48■□□□□ 0.39
SCN4B-202ENST00000415030 DIEXFQ68CQ4 756 aaKnown RBP17.45■□□□□ 0.38
SCN4B-202ENST00000415030 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.42■□□□□ 0.38
SCN4B-202ENST00000415030 PABPN1Q86U42 306 aaKnown RBP eCLIP17.36■□□□□ 0.37
SCN4B-202ENST00000415030 GTF3C3Q9Y5Q9 886 aa17.35■□□□□ 0.37
SCN4B-202ENST00000415030 TTBK1Q5TCY1 1321 aaPredicted RBP17.35■□□□□ 0.37
SCN4B-202ENST00000415030 APLP2Q06481 763 aa17.31■□□□□ 0.36
SCN4B-202ENST00000415030 RSF1Q96T23 1441 aaPredicted RBP17.29■□□□□ 0.36
SCN4B-202ENST00000415030 NEUROD1Q13562 356 aa17.25■□□□□ 0.35
SCN4B-202ENST00000415030 YTHDC1Q96MU7 727 aaKnown RBP17.25■□□□□ 0.35
SCN4B-202ENST00000415030 UBTFP17480 764 aaKnown RBP17.23■□□□□ 0.35
SCN4B-202ENST00000415030 ZNF316A6NFI3 1004 aaPredicted RBP17.17■□□□□ 0.34
SCN4B-202ENST00000415030 RB1CC1Q8TDY2 1594 aa17.16■□□□□ 0.34
SCN4B-202ENST00000415030 SCRIBQ14160 1630 aa17.16■□□□□ 0.34
SCN4B-202ENST00000415030 RANGAP1P46060 587 aaPredicted RBP17.11■□□□□ 0.33
SCN4B-202ENST00000415030 HNRNPUL2Q1KMD3 747 aaKnown RBP16.98■□□□□ 0.31
SCN4B-202ENST00000415030 CLSPNQ9HAW4 1339 aa16.95■□□□□ 0.3
SCN4B-202ENST00000415030 CSRNP3Q8WYN3 585 aa16.92■□□□□ 0.3
SCN4B-202ENST00000415030 ATP1B4Q9UN42 357 aaPredicted RBP16.92■□□□□ 0.3
SCN4B-202ENST00000415030 CEP162Q5TB80 1403 aa16.86■□□□□ 0.29
SCN4B-202ENST00000415030 EEA1Q15075 1411 aa16.85■□□□□ 0.29
SCN4B-202ENST00000415030 TNIKQ9UKE5 1360 aa16.83■□□□□ 0.28
SCN4B-202ENST00000415030 MIER1Q8N108 512 aa16.78■□□□□ 0.28
SCN4B-202ENST00000415030 WRNQ14191 1432 aaPredicted RBP eCLIP16.78■□□□□ 0.28
SCN4B-202ENST00000415030 NEFLP07196 543 aa16.77■□□□□ 0.28
SCN4B-202ENST00000415030 NACADO15069 1562 aa16.77■□□□□ 0.27
SCN4B-202ENST00000415030 CECR2Q9BXF3 1484 aa16.76■□□□□ 0.27
SCN4B-202ENST00000415030 MROH2BQ7Z745 1585 aa16.72■□□□□ 0.27
SCN4B-202ENST00000415030 GOLGA3Q08378 1498 aa16.71■□□□□ 0.26
SCN4B-202ENST00000415030 BAZ1AQ9NRL2 1556 aaPredicted RBP16.67■□□□□ 0.26
SCN4B-202ENST00000415030 ERICH6Q7L0X2 663 aa16.6■□□□□ 0.25
SCN4B-202ENST00000415030 CLIP1P30622 1438 aa16.59■□□□□ 0.25
SCN4B-202ENST00000415030 WIZO95785 1651 aa16.58■□□□□ 0.24
SCN4B-202ENST00000415030 CCDC88BA6NC98 1476 aa16.56■□□□□ 0.24
SCN4B-202ENST00000415030 CEP164Q9UPV0 1460 aa16.56■□□□□ 0.24
SCN4B-202ENST00000415030 SOGA1O94964 1423 aa16.55■□□□□ 0.24
SCN4B-202ENST00000415030 ABCC8Q09428 1581 aa16.5■□□□□ 0.23
SCN4B-202ENST00000415030 ITGAEP38570 1179 aa16.49■□□□□ 0.23
SCN4B-202ENST00000415030 TOP2AP11388 1531 aaKnown RBP16.48■□□□□ 0.23
SCN4B-202ENST00000415030 SUPT16HQ9Y5B9 1047 aaKnown RBP16.46■□□□□ 0.23
SCN4B-202ENST00000415030 FBLN2P98095 1184 aa16.46■□□□□ 0.23
SCN4B-202ENST00000415030 VPS8Q8N3P4 1428 aa16.44■□□□□ 0.22
SCN4B-202ENST00000415030 ANP32EQ9BTT0 268 aa16.43■□□□□ 0.22
SCN4B-202ENST00000415030 BCANQ96GW7 911 aa16.41■□□□□ 0.22
SCN4B-202ENST00000415030 MYT1LQ9UL68 1186 aa16.4■□□□□ 0.22
SCN4B-202ENST00000415030 ANP32CO43423 234 aa16.36■□□□□ 0.21
SCN4B-202ENST00000415030 FKBP8Q14318 412 aa16.35■□□□□ 0.21
SCN4B-202ENST00000415030 BAZ1BQ9UIG0 1483 aaKnown RBP16.29■□□□□ 0.2
SCN4B-202ENST00000415030 RUSC2Q8N2Y8 1516 aa16.28■□□□□ 0.2
SCN4B-202ENST00000415030 SMARCA2P51531 1590 aa16.28■□□□□ 0.2
SCN4B-202ENST00000415030 SMARCA4P51532 1647 aa16.26■□□□□ 0.19
SCN4B-202ENST00000415030 TSHZ2Q9NRE2 1034 aa16.26■□□□□ 0.19
SCN4B-202ENST00000415030 FAM50AQ14320 339 aaKnown RBP16.25■□□□□ 0.19
SCN4B-202ENST00000415030 CDK11AQ9UQ88 783 aaPredicted RBP16.25■□□□□ 0.19
SCN4B-202ENST00000415030 DDX10Q13206 875 aaKnown RBP16.24■□□□□ 0.19
SCN4B-202ENST00000415030 DHX57Q6P158 1386 aaKnown RBP16.23■□□□□ 0.19
SCN4B-202ENST00000415030 CCNB3Q8WWL7 1395 aa16.18■□□□□ 0.18
SCN4B-202ENST00000415030 KIF21BO75037 1637 aa16.18■□□□□ 0.18
SCN4B-202ENST00000415030 EIF4G1Q04637 1599 aaKnown RBP16.16■□□□□ 0.18
SCN4B-202ENST00000415030 RAPGEF2Q9Y4G8 1499 aa16.13■□□□□ 0.17
SCN4B-202ENST00000415030 TIMELESSQ9UNS1 1208 aa16.13■□□□□ 0.17
SCN4B-202ENST00000415030 TRIM52Q96A61 297 aa16.1■□□□□ 0.17
SCN4B-202ENST00000415030 CCER2I3L3R5 266 aa16.09■□□□□ 0.17
SCN4B-202ENST00000415030 BCL11AQ9H165 835 aa16.09■□□□□ 0.17
SCN4B-202ENST00000415030 TONSLQ96HA7 1378 aa16.09■□□□□ 0.17
SCN4B-202ENST00000415030 KIF27Q86VH2 1401 aa16.08■□□□□ 0.17
SCN4B-202ENST00000415030 KANK4Q5T7N3 995 aaPredicted RBP16.08■□□□□ 0.16
SCN4B-202ENST00000415030 RBM19Q9Y4C8 960 aaKnown RBP16.05■□□□□ 0.16
SCN4B-202ENST00000415030 HNRNPUQ00839 825 aaKnown RBP eCLIP16.03■□□□□ 0.16
SCN4B-202ENST00000415030 SETD5Q9C0A6 1442 aa16.02■□□□□ 0.16
SCN4B-202ENST00000415030 RAB3GAP2Q9H2M9 1393 aa16.01■□□□□ 0.15
SCN4B-202ENST00000415030 ARID3CA6NKF2 412 aa15.99■□□□□ 0.15
SCN4B-202ENST00000415030 RTL5Q5HYW3 569 aaPredicted RBP15.98■□□□□ 0.15
SCN4B-202ENST00000415030 P3H3Q8IVL6 736 aa15.98■□□□□ 0.15
SCN4B-202ENST00000415030 RRBP1Q9P2E9 1410 aaKnown RBP15.97■□□□□ 0.15
SCN4B-202ENST00000415030 SYNJ1O43426 1573 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms