RNA–Protein interactions for RNA: ENST00000414223.4

AL353608.3-203, humanhuman

TSL 2

Gene AL353608.3, Length 3,372 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353608.3-203ENST00000414223 NISCHQ9Y2I1 1504 aa22.48■■□□□ 1.19
AL353608.3-203ENST00000414223 DCAF8L2P0C7V8 631 aa20.7■□□□□ 0.9
AL353608.3-203ENST00000414223 SHROOM4Q9ULL8 1493 aa20.69■□□□□ 0.9
AL353608.3-203ENST00000414223 SUPT5HO00267 1087 aaKnown RBP20.4■□□□□ 0.86
AL353608.3-203ENST00000414223 EHMT2Q96KQ7 1210 aa19.48■□□□□ 0.71
AL353608.3-203ENST00000414223 FAM9AQ8IZU1 332 aaPredicted RBP19.1■□□□□ 0.65
AL353608.3-203ENST00000414223 LOC105371045A0A1W2PR82 267 aa19.08■□□□□ 0.65
AL353608.3-203ENST00000414223 PCGF6Q9BYE7 350 aa19.08■□□□□ 0.65
AL353608.3-203ENST00000414223 CHIC1Q5VXU3 224 aa19.07■□□□□ 0.64
AL353608.3-203ENST00000414223 PPARGC1BQ86YN6 1023 aaKnown RBP19.02■□□□□ 0.63
AL353608.3-203ENST00000414223 HRCP23327 699 aa18.92■□□□□ 0.62
AL353608.3-203ENST00000414223 ZCCHC6Q5VYS8 1495 aaKnown RBP18.82■□□□□ 0.6
AL353608.3-203ENST00000414223 MYO15BQ96JP2 1530 aa18.74■□□□□ 0.59
AL353608.3-203ENST00000414223 TTBK1Q5TCY1 1321 aaPredicted RBP18.71■□□□□ 0.59
AL353608.3-203ENST00000414223 TRIM41Q8WV44 630 aa18.61■□□□□ 0.57
AL353608.3-203ENST00000414223 ABCC9O60706 1549 aa18.6■□□□□ 0.57
AL353608.3-203ENST00000414223 CCDC180Q9P1Z9 1646 aa18.41■□□□□ 0.54
AL353608.3-203ENST00000414223 SCRIBQ14160 1630 aa18.34■□□□□ 0.53
AL353608.3-203ENST00000414223 RANGAP1P46060 587 aaPredicted RBP18.33■□□□□ 0.53
AL353608.3-203ENST00000414223 PABPN1Q86U42 306 aaKnown RBP eCLIP18.3■□□□□ 0.52
AL353608.3-203ENST00000414223 TRIM26Q12899 539 aaPredicted RBP18.12■□□□□ 0.49
AL353608.3-203ENST00000414223 RSF1Q96T23 1441 aaPredicted RBP18.06■□□□□ 0.48
AL353608.3-203ENST00000414223 CECR2Q9BXF3 1484 aa18.02■□□□□ 0.48
AL353608.3-203ENST00000414223 UBTFP17480 764 aaKnown RBP17.98■□□□□ 0.47
AL353608.3-203ENST00000414223 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.98■□□□□ 0.47
AL353608.3-203ENST00000414223 SCAF1Q9H7N4 1312 aaKnown RBP17.95■□□□□ 0.46
AL353608.3-203ENST00000414223 CCER1Q8TC90 406 aaPredicted RBP17.88■□□□□ 0.45
AL353608.3-203ENST00000414223 DCAF1Q9Y4B6 1507 aa17.83■□□□□ 0.45
AL353608.3-203ENST00000414223 RB1CC1Q8TDY2 1594 aa17.83■□□□□ 0.44
AL353608.3-203ENST00000414223 MROH2BQ7Z745 1585 aa17.73■□□□□ 0.43
AL353608.3-203ENST00000414223 ZEB1P37275 1124 aaPredicted RBP17.73■□□□□ 0.43
AL353608.3-203ENST00000414223 PELP1Q8IZL8 1130 aaKnown RBP17.72■□□□□ 0.43
AL353608.3-203ENST00000414223 HNRNPUL2Q1KMD3 747 aaKnown RBP17.7■□□□□ 0.42
AL353608.3-203ENST00000414223 NEUROD1Q13562 356 aa17.6■□□□□ 0.41
AL353608.3-203ENST00000414223 WIZO95785 1651 aa17.6■□□□□ 0.41
AL353608.3-203ENST00000414223 YTHDC1Q96MU7 727 aaKnown RBP17.56■□□□□ 0.4
AL353608.3-203ENST00000414223 GTF3C3Q9Y5Q9 886 aa17.55■□□□□ 0.4
AL353608.3-203ENST00000414223 APLP2Q06481 763 aa17.52■□□□□ 0.4
AL353608.3-203ENST00000414223 ITGAEP38570 1179 aa17.52■□□□□ 0.39
AL353608.3-203ENST00000414223 ABCC8Q09428 1581 aa17.5■□□□□ 0.39
AL353608.3-203ENST00000414223 ATP1B4Q9UN42 357 aaPredicted RBP17.5■□□□□ 0.39
AL353608.3-203ENST00000414223 CSRNP3Q8WYN3 585 aa17.49■□□□□ 0.39
AL353608.3-203ENST00000414223 ACIN1Q9UKV3 1341 aaKnown RBP17.48■□□□□ 0.39
AL353608.3-203ENST00000414223 SOGA1O94964 1423 aa17.45■□□□□ 0.38
AL353608.3-203ENST00000414223 DIEXFQ68CQ4 756 aaKnown RBP17.43■□□□□ 0.38
AL353608.3-203ENST00000414223 CCDC88BA6NC98 1476 aa17.42■□□□□ 0.38
AL353608.3-203ENST00000414223 NACADO15069 1562 aa17.42■□□□□ 0.38
AL353608.3-203ENST00000414223 RUSC2Q8N2Y8 1516 aa17.37■□□□□ 0.37
AL353608.3-203ENST00000414223 CENPBP07199 599 aaPredicted RBP17.35■□□□□ 0.37
AL353608.3-203ENST00000414223 P3H3Q8IVL6 736 aa17.26■□□□□ 0.35
AL353608.3-203ENST00000414223 SLC24A1O60721 1099 aa17.23■□□□□ 0.35
AL353608.3-203ENST00000414223 CEP162Q5TB80 1403 aa17.22■□□□□ 0.35
AL353608.3-203ENST00000414223 BAZ1AQ9NRL2 1556 aaPredicted RBP17.21■□□□□ 0.35
AL353608.3-203ENST00000414223 MYT1Q01538 1121 aa17.15■□□□□ 0.34
AL353608.3-203ENST00000414223 WRNQ14191 1432 aaPredicted RBP eCLIP17.1■□□□□ 0.33
AL353608.3-203ENST00000414223 ARID3CA6NKF2 412 aa17.04■□□□□ 0.32
AL353608.3-203ENST00000414223 MIER1Q8N108 512 aa17.04■□□□□ 0.32
AL353608.3-203ENST00000414223 SMARCA4P51532 1647 aa17.03■□□□□ 0.32
AL353608.3-203ENST00000414223 ZNF316A6NFI3 1004 aaPredicted RBP17.01■□□□□ 0.31
AL353608.3-203ENST00000414223 CLIP1P30622 1438 aa16.99■□□□□ 0.31
AL353608.3-203ENST00000414223 FAM50AQ14320 339 aaKnown RBP16.98■□□□□ 0.31
AL353608.3-203ENST00000414223 TOP2AP11388 1531 aaKnown RBP16.98■□□□□ 0.31
AL353608.3-203ENST00000414223 SMARCA2P51531 1590 aa16.98■□□□□ 0.31
AL353608.3-203ENST00000414223 KANK4Q5T7N3 995 aaPredicted RBP16.98■□□□□ 0.31
AL353608.3-203ENST00000414223 TNIKQ9UKE5 1360 aa16.97■□□□□ 0.31
AL353608.3-203ENST00000414223 BAZ1BQ9UIG0 1483 aaKnown RBP16.97■□□□□ 0.31
AL353608.3-203ENST00000414223 HIRIP3Q9BW71 556 aaPredicted RBP16.93■□□□□ 0.3
AL353608.3-203ENST00000414223 GOLGA3Q08378 1498 aa16.88■□□□□ 0.29
AL353608.3-203ENST00000414223 RAPGEF2Q9Y4G8 1499 aa16.88■□□□□ 0.29
AL353608.3-203ENST00000414223 PRKCSHP14314 528 aaPredicted RBP16.87■□□□□ 0.29
AL353608.3-203ENST00000414223 CNGB1Q14028 1251 aaPredicted RBP16.87■□□□□ 0.29
AL353608.3-203ENST00000414223 ATAD2BQ9ULI0 1458 aa16.85■□□□□ 0.29
AL353608.3-203ENST00000414223 UNC13AQ9UPW8 1703 aa16.77■□□□□ 0.28
AL353608.3-203ENST00000414223 BICRAQ9NZM4 1560 aa16.77■□□□□ 0.27
AL353608.3-203ENST00000414223 BCANQ96GW7 911 aa16.75■□□□□ 0.27
AL353608.3-203ENST00000414223 SYNJ1O43426 1573 aa16.75■□□□□ 0.27
AL353608.3-203ENST00000414223 DNAJC5BQ9UF47 199 aa16.74■□□□□ 0.27
AL353608.3-203ENST00000414223 CEP164Q9UPV0 1460 aa16.74■□□□□ 0.27
AL353608.3-203ENST00000414223 SIN3AQ96ST3 1273 aa16.71■□□□□ 0.27
AL353608.3-203ENST00000414223 EEA1Q15075 1411 aa16.69■□□□□ 0.26
AL353608.3-203ENST00000414223 CHIC2Q9UKJ5 165 aa16.65■□□□□ 0.26
AL353608.3-203ENST00000414223 VPS8Q8N3P4 1428 aa16.64■□□□□ 0.25
AL353608.3-203ENST00000414223 DDX10Q13206 875 aaKnown RBP16.63■□□□□ 0.25
AL353608.3-203ENST00000414223 KCNH8Q96L42 1107 aa16.61■□□□□ 0.25
AL353608.3-203ENST00000414223 EIF4G1Q04637 1599 aaKnown RBP16.6■□□□□ 0.25
AL353608.3-203ENST00000414223 FBLN2P98095 1184 aa16.6■□□□□ 0.25
AL353608.3-203ENST00000414223 CUX2O14529 1486 aa16.6■□□□□ 0.25
AL353608.3-203ENST00000414223 SUPT16HQ9Y5B9 1047 aaKnown RBP16.58■□□□□ 0.24
AL353608.3-203ENST00000414223 KIF27Q86VH2 1401 aa16.57■□□□□ 0.24
AL353608.3-203ENST00000414223 POLR3GLQ9BT43 218 aa16.56■□□□□ 0.24
AL353608.3-203ENST00000414223 SENP3-EIF4A1A0A087X0R7 540 aa16.55■□□□□ 0.24
AL353608.3-203ENST00000414223 TRIM52Q96A61 297 aa16.54■□□□□ 0.24
AL353608.3-203ENST00000414223 CARMIL1Q5VZK9 1371 aa16.5■□□□□ 0.23
AL353608.3-203ENST00000414223 TDRD9Q8NDG6 1382 aaKnown RBP16.5■□□□□ 0.23
AL353608.3-203ENST00000414223 RRP7BPQ9NSQ0 103 aa16.49■□□□□ 0.23
AL353608.3-203ENST00000414223 KIF21BO75037 1637 aa16.48■□□□□ 0.23
AL353608.3-203ENST00000414223 ARAP1Q96P48 1450 aa16.47■□□□□ 0.23
AL353608.3-203ENST00000414223 TSHZ2Q9NRE2 1034 aa16.45■□□□□ 0.22
AL353608.3-203ENST00000414223 IGF1RP08069 1367 aa16.43■□□□□ 0.22
AL353608.3-203ENST00000414223 CCNB3Q8WWL7 1395 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms