RNA–Protein interactions for RNA: ENST00000409583.5

ITGB6-202, Transcript of integrin subunit beta 6, humanhuman

TSL 3

Gene ITGB6, Length 4,500 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB6-202ENST00000409583 DCAF8L2P0C7V8 631 aa16.54■□□□□ 0.24
ITGB6-202ENST00000409583 NISCHQ9Y2I1 1504 aa16.44■□□□□ 0.22
ITGB6-202ENST00000409583 SUPT5HO00267 1087 aaKnown RBP15.58■□□□□ 0.08
ITGB6-202ENST00000409583 SHROOM4Q9ULL8 1493 aa15.57■□□□□ 0.08
ITGB6-202ENST00000409583 PELP1Q8IZL8 1130 aaKnown RBP15.31■□□□□ 0.04
ITGB6-202ENST00000409583 MYT1Q01538 1121 aa15.23■□□□□ 0.03
ITGB6-202ENST00000409583 EHMT2Q96KQ7 1210 aa15□□□□□ -0.01
ITGB6-202ENST00000409583 FAM9AQ8IZU1 332 aaPredicted RBP14.67□□□□□ -0.06
ITGB6-202ENST00000409583 TTBK1Q5TCY1 1321 aaPredicted RBP14.41□□□□□ -0.1
ITGB6-202ENST00000409583 RANGAP1P46060 587 aaPredicted RBP14.38□□□□□ -0.11
ITGB6-202ENST00000409583 TRIM41Q8WV44 630 aa14.36□□□□□ -0.11
ITGB6-202ENST00000409583 ABCC9O60706 1549 aa14.29□□□□□ -0.12
ITGB6-202ENST00000409583 APLP2Q06481 763 aa14.29□□□□□ -0.12
ITGB6-202ENST00000409583 PCGF6Q9BYE7 350 aa14.18□□□□□ -0.14
ITGB6-202ENST00000409583 PABPN1Q86U42 306 aaKnown RBP eCLIP14.14□□□□□ -0.15
ITGB6-202ENST00000409583 UBTFP17480 764 aaKnown RBP14.13□□□□□ -0.15
ITGB6-202ENST00000409583 ATP1B4Q9UN42 357 aaPredicted RBP14.1□□□□□ -0.15
ITGB6-202ENST00000409583 PPARGC1BQ86YN6 1023 aaKnown RBP14.02□□□□□ -0.17
ITGB6-202ENST00000409583 CHIC1Q5VXU3 224 aa13.94□□□□□ -0.18
ITGB6-202ENST00000409583 LOC105371045A0A1W2PR82 267 aa13.93□□□□□ -0.18
ITGB6-202ENST00000409583 CENPBP07199 599 aaPredicted RBP13.91□□□□□ -0.18
ITGB6-202ENST00000409583 HRCP23327 699 aa13.9□□□□□ -0.18
ITGB6-202ENST00000409583 ERICH6Q7L0X2 663 aa13.89□□□□□ -0.19
ITGB6-202ENST00000409583 CCER1Q8TC90 406 aaPredicted RBP13.8□□□□□ -0.2
ITGB6-202ENST00000409583 ITGAEP38570 1179 aa13.67□□□□□ -0.22
ITGB6-202ENST00000409583 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.66□□□□□ -0.22
ITGB6-202ENST00000409583 HNRNPUL2Q1KMD3 747 aaKnown RBP13.66□□□□□ -0.22
ITGB6-202ENST00000409583 ZEB1P37275 1124 aaPredicted RBP13.62□□□□□ -0.23
ITGB6-202ENST00000409583 ZCCHC6Q5VYS8 1495 aaKnown RBP13.61□□□□□ -0.23
ITGB6-202ENST00000409583 SCRIBQ14160 1630 aa13.59□□□□□ -0.23
ITGB6-202ENST00000409583 TRIM26Q12899 539 aaPredicted RBP13.56□□□□□ -0.24
ITGB6-202ENST00000409583 CCDC180Q9P1Z9 1646 aa13.48□□□□□ -0.25
ITGB6-202ENST00000409583 MYT1LQ9UL68 1186 aa13.47□□□□□ -0.25
ITGB6-202ENST00000409583 FBLN2P98095 1184 aa13.43□□□□□ -0.26
ITGB6-202ENST00000409583 YTHDC1Q96MU7 727 aaKnown RBP13.35□□□□□ -0.27
ITGB6-202ENST00000409583 GTF3C3Q9Y5Q9 886 aa13.33□□□□□ -0.27
ITGB6-202ENST00000409583 P3H3Q8IVL6 736 aa13.33□□□□□ -0.28
ITGB6-202ENST00000409583 BCL11AQ9H165 835 aa13.32□□□□□ -0.28
ITGB6-202ENST00000409583 FAM50AQ14320 339 aaKnown RBP13.31□□□□□ -0.28
ITGB6-202ENST00000409583 CSRNP3Q8WYN3 585 aa13.3□□□□□ -0.28
ITGB6-202ENST00000409583 ARID3CA6NKF2 412 aa13.3□□□□□ -0.28
ITGB6-202ENST00000409583 SCAF1Q9H7N4 1312 aaKnown RBP13.29□□□□□ -0.28
ITGB6-202ENST00000409583 POLR3GLQ9BT43 218 aa13.27□□□□□ -0.28
ITGB6-202ENST00000409583 CNGB1Q14028 1251 aaPredicted RBP13.25□□□□□ -0.29
ITGB6-202ENST00000409583 RB1CC1Q8TDY2 1594 aa13.22□□□□□ -0.29
ITGB6-202ENST00000409583 ACIN1Q9UKV3 1341 aaKnown RBP13.22□□□□□ -0.29
ITGB6-202ENST00000409583 RSF1Q96T23 1441 aaPredicted RBP13.15□□□□□ -0.3
ITGB6-202ENST00000409583 TRIM52Q96A61 297 aa13.14□□□□□ -0.31
ITGB6-202ENST00000409583 NEUROD1Q13562 356 aa13.11□□□□□ -0.31
ITGB6-202ENST00000409583 NACADO15069 1562 aa13.11□□□□□ -0.31
ITGB6-202ENST00000409583 CECR2Q9BXF3 1484 aa13.05□□□□□ -0.32
ITGB6-202ENST00000409583 PRKCSHP14314 528 aaPredicted RBP13.05□□□□□ -0.32
ITGB6-202ENST00000409583 NEFLP07196 543 aa13.05□□□□□ -0.32
ITGB6-202ENST00000409583 ZNF777Q9ULD5 760 aaPredicted RBP13.03□□□□□ -0.32
ITGB6-202ENST00000409583 ZNF326Q5BKZ1 582 aaKnown RBP13.01□□□□□ -0.33
ITGB6-202ENST00000409583 SLC4A1APQ9BWU0 796 aaKnown RBP12.98□□□□□ -0.33
ITGB6-202ENST00000409583 ANP32EQ9BTT0 268 aa12.98□□□□□ -0.33
ITGB6-202ENST00000409583 BAZ1BQ9UIG0 1483 aaKnown RBP12.96□□□□□ -0.34
ITGB6-202ENST00000409583 DIEXFQ68CQ4 756 aaKnown RBP12.94□□□□□ -0.34
ITGB6-202ENST00000409583 RTL5Q5HYW3 569 aaPredicted RBP12.92□□□□□ -0.34
ITGB6-202ENST00000409583 MYO15BQ96JP2 1530 aa12.91□□□□□ -0.34
ITGB6-202ENST00000409583 DCAF1Q9Y4B6 1507 aa12.91□□□□□ -0.34
ITGB6-202ENST00000409583 EIF5BO60841 1220 aaKnown RBP12.89□□□□□ -0.35
ITGB6-202ENST00000409583 CHMP7Q8WUX9 453 aaPredicted RBP12.89□□□□□ -0.35
ITGB6-202ENST00000409583 CDK11AQ9UQ88 783 aaPredicted RBP12.88□□□□□ -0.35
ITGB6-202ENST00000409583 WRNQ14191 1432 aaPredicted RBP eCLIP12.87□□□□□ -0.35
ITGB6-202ENST00000409583 GLIPR1L2Q4G1C9 344 aa12.87□□□□□ -0.35
ITGB6-202ENST00000409583 BAZ1AQ9NRL2 1556 aaPredicted RBP12.86□□□□□ -0.35
ITGB6-202ENST00000409583 SLC24A1O60721 1099 aa12.85□□□□□ -0.35
ITGB6-202ENST00000409583 CHIC2Q9UKJ5 165 aa12.85□□□□□ -0.35
ITGB6-202ENST00000409583 MROH2BQ7Z745 1585 aa12.82□□□□□ -0.36
ITGB6-202ENST00000409583 CLIP1P30622 1438 aa12.81□□□□□ -0.36
ITGB6-202ENST00000409583 NPM1P06748 294 aaKnown RBP eCLIP12.77□□□□□ -0.36
ITGB6-202ENST00000409583 PLPPR3Q6T4P5 718 aa12.75□□□□□ -0.37
ITGB6-202ENST00000409583 MTUS2Q5JR59 1369 aa12.75□□□□□ -0.37
ITGB6-202ENST00000409583 CEP162Q5TB80 1403 aa12.73□□□□□ -0.37
ITGB6-202ENST00000409583 ZNF316A6NFI3 1004 aaPredicted RBP12.72□□□□□ -0.37
ITGB6-202ENST00000409583 BCANQ96GW7 911 aa12.72□□□□□ -0.37
ITGB6-202ENST00000409583 KCNH8Q96L42 1107 aa12.72□□□□□ -0.37
ITGB6-202ENST00000409583 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.72□□□□□ -0.37
ITGB6-202ENST00000409583 KIF27Q86VH2 1401 aa12.71□□□□□ -0.38
ITGB6-202ENST00000409583 CHGAP10645 457 aaKnown RBP12.7□□□□□ -0.38
ITGB6-202ENST00000409583 ERCC6Q03468 1493 aa12.7□□□□□ -0.38
ITGB6-202ENST00000409583 SOGA1O94964 1423 aa12.69□□□□□ -0.38
ITGB6-202ENST00000409583 GOLGA3Q08378 1498 aa12.69□□□□□ -0.38
ITGB6-202ENST00000409583 CCDC88BA6NC98 1476 aa12.69□□□□□ -0.38
ITGB6-202ENST00000409583 EEA1Q15075 1411 aa12.68□□□□□ -0.38
ITGB6-202ENST00000409583 ANP32CO43423 234 aa12.67□□□□□ -0.38
ITGB6-202ENST00000409583 CLSPNQ9HAW4 1339 aa12.66□□□□□ -0.38
ITGB6-202ENST00000409583 RRP7BPQ9NSQ0 103 aa12.66□□□□□ -0.38
ITGB6-202ENST00000409583 TSPY4P0CV99 314 aa12.65□□□□□ -0.38
ITGB6-202ENST00000409583 TSPY10P0CW01 314 aa12.65□□□□□ -0.38
ITGB6-202ENST00000409583 ABCC8Q09428 1581 aa12.65□□□□□ -0.38
ITGB6-202ENST00000409583 TONSLQ96HA7 1378 aa12.64□□□□□ -0.39
ITGB6-202ENST00000409583 ESF1Q9H501 851 aaKnown RBP12.63□□□□□ -0.39
ITGB6-202ENST00000409583 WIZO95785 1651 aa12.63□□□□□ -0.39
ITGB6-202ENST00000409583 CUX2O14529 1486 aa12.62□□□□□ -0.39
ITGB6-202ENST00000409583 SENP3Q9H4L4 574 aaPredicted RBP12.61□□□□□ -0.39
ITGB6-202ENST00000409583 PLEKHD1A6NEE1 506 aa12.6□□□□□ -0.39
ITGB6-202ENST00000409583 TNIKQ9UKE5 1360 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms