RNA–Protein interactions for RNA: ENST00000404019.2

DSCAM-202, Transcript of DS cell adhesion molecule, humanhuman

TSL 1 (best)

Gene DSCAM, Length 5,374 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSCAM-202ENST00000404019 DCAF8L2P0C7V8 631 aa17.89■□□□□ 0.45
DSCAM-202ENST00000404019 NISCHQ9Y2I1 1504 aa16.94■□□□□ 0.3
DSCAM-202ENST00000404019 SUPT5HO00267 1087 aaKnown RBP16.74■□□□□ 0.27
DSCAM-202ENST00000404019 EHMT2Q96KQ7 1210 aa16.36■□□□□ 0.21
DSCAM-202ENST00000404019 SHROOM4Q9ULL8 1493 aa16.34■□□□□ 0.21
DSCAM-202ENST00000404019 APLP2Q06481 763 aa16.21■□□□□ 0.18
DSCAM-202ENST00000404019 PELP1Q8IZL8 1130 aaKnown RBP16.16■□□□□ 0.18
DSCAM-202ENST00000404019 FAM9AQ8IZU1 332 aaPredicted RBP16.13■□□□□ 0.17
DSCAM-202ENST00000404019 TTBK1Q5TCY1 1321 aaPredicted RBP15.8■□□□□ 0.12
DSCAM-202ENST00000404019 RANGAP1P46060 587 aaPredicted RBP15.71■□□□□ 0.11
DSCAM-202ENST00000404019 ATP1B4Q9UN42 357 aaPredicted RBP15.66■□□□□ 0.1
DSCAM-202ENST00000404019 PCGF6Q9BYE7 350 aa15.59■□□□□ 0.09
DSCAM-202ENST00000404019 TRIM41Q8WV44 630 aa15.51■□□□□ 0.07
DSCAM-202ENST00000404019 ERICH6Q7L0X2 663 aa15.49■□□□□ 0.07
DSCAM-202ENST00000404019 CCER1Q8TC90 406 aaPredicted RBP15.46■□□□□ 0.07
DSCAM-202ENST00000404019 UBTFP17480 764 aaKnown RBP15.44■□□□□ 0.06
DSCAM-202ENST00000404019 CENPBP07199 599 aaPredicted RBP15.41■□□□□ 0.06
DSCAM-202ENST00000404019 ZEB1P37275 1124 aaPredicted RBP15.35■□□□□ 0.05
DSCAM-202ENST00000404019 NEFLP07196 543 aa15.25■□□□□ 0.03
DSCAM-202ENST00000404019 MYT1LQ9UL68 1186 aa15.23■□□□□ 0.03
DSCAM-202ENST00000404019 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.14■□□□□ 0.01
DSCAM-202ENST00000404019 HNRNPUL2Q1KMD3 747 aaKnown RBP15.14■□□□□ 0.01
DSCAM-202ENST00000404019 YTHDC1Q96MU7 727 aaKnown RBP15.09■□□□□ 0.01
DSCAM-202ENST00000404019 PPARGC1BQ86YN6 1023 aaKnown RBP15.03■□□□□ -0
DSCAM-202ENST00000404019 POLR3GLQ9BT43 218 aa15.01□□□□□ -0.01
DSCAM-202ENST00000404019 ITGAEP38570 1179 aa14.99□□□□□ -0.01
DSCAM-202ENST00000404019 ABCC9O60706 1549 aa14.93□□□□□ -0.02
DSCAM-202ENST00000404019 DAXXQ9UER7 740 aaPredicted RBP14.91□□□□□ -0.02
DSCAM-202ENST00000404019 CHIC1Q5VXU3 224 aa14.91□□□□□ -0.02
DSCAM-202ENST00000404019 SLC4A1APQ9BWU0 796 aaKnown RBP14.84□□□□□ -0.03
DSCAM-202ENST00000404019 CNGB1Q14028 1251 aaPredicted RBP14.82□□□□□ -0.04
DSCAM-202ENST00000404019 TRIM26Q12899 539 aaPredicted RBP14.81□□□□□ -0.04
DSCAM-202ENST00000404019 MYT1Q01538 1121 aa14.7□□□□□ -0.06
DSCAM-202ENST00000404019 HRCP23327 699 aa14.61□□□□□ -0.07
DSCAM-202ENST00000404019 CLSPNQ9HAW4 1339 aa14.6□□□□□ -0.07
DSCAM-202ENST00000404019 LOC105371045A0A1W2PR82 267 aa14.6□□□□□ -0.07
DSCAM-202ENST00000404019 FAM50AQ14320 339 aaKnown RBP14.58□□□□□ -0.07
DSCAM-202ENST00000404019 TRIM52Q96A61 297 aa14.57□□□□□ -0.08
DSCAM-202ENST00000404019 ZNF316A6NFI3 1004 aaPredicted RBP14.52□□□□□ -0.09
DSCAM-202ENST00000404019 PABPN1Q86U42 306 aaKnown RBP eCLIP14.51□□□□□ -0.09
DSCAM-202ENST00000404019 FBLN2P98095 1184 aa14.48□□□□□ -0.09
DSCAM-202ENST00000404019 CCDC180Q9P1Z9 1646 aa14.46□□□□□ -0.1
DSCAM-202ENST00000404019 ZNF326Q5BKZ1 582 aaKnown RBP14.42□□□□□ -0.1
DSCAM-202ENST00000404019 RTL5Q5HYW3 569 aaPredicted RBP14.42□□□□□ -0.1
DSCAM-202ENST00000404019 NEUROD1Q13562 356 aa14.42□□□□□ -0.1
DSCAM-202ENST00000404019 ZBTB47Q9UFB7 747 aaPredicted RBP14.41□□□□□ -0.1
DSCAM-202ENST00000404019 BCANQ96GW7 911 aa14.38□□□□□ -0.11
DSCAM-202ENST00000404019 SLC24A1O60721 1099 aa14.37□□□□□ -0.11
DSCAM-202ENST00000404019 DIEXFQ68CQ4 756 aaKnown RBP14.34□□□□□ -0.11
DSCAM-202ENST00000404019 NEFMP07197 916 aa14.31□□□□□ -0.12
DSCAM-202ENST00000404019 RB1CC1Q8TDY2 1594 aa14.29□□□□□ -0.12
DSCAM-202ENST00000404019 ANP32CO43423 234 aa14.27□□□□□ -0.12
DSCAM-202ENST00000404019 CANXP27824 592 aaKnown RBP14.26□□□□□ -0.13
DSCAM-202ENST00000404019 BCL11AQ9H165 835 aa14.24□□□□□ -0.13
DSCAM-202ENST00000404019 ARID3CA6NKF2 412 aa14.23□□□□□ -0.13
DSCAM-202ENST00000404019 ESF1Q9H501 851 aaKnown RBP14.23□□□□□ -0.13
DSCAM-202ENST00000404019 P3H3Q8IVL6 736 aa14.19□□□□□ -0.14
DSCAM-202ENST00000404019 ZNF777Q9ULD5 760 aaPredicted RBP14.19□□□□□ -0.14
DSCAM-202ENST00000404019 CDK11AQ9UQ88 783 aaPredicted RBP14.14□□□□□ -0.15
DSCAM-202ENST00000404019 NACADO15069 1562 aa14.11□□□□□ -0.15
DSCAM-202ENST00000404019 STAG3Q9UJ98 1225 aa14.11□□□□□ -0.15
DSCAM-202ENST00000404019 PLPPR3Q6T4P5 718 aa14.08□□□□□ -0.16
DSCAM-202ENST00000404019 NPM1P06748 294 aaKnown RBP eCLIP14.08□□□□□ -0.16
DSCAM-202ENST00000404019 CHGAP10645 457 aaKnown RBP14.07□□□□□ -0.16
DSCAM-202ENST00000404019 SCRIBQ14160 1630 aa14.07□□□□□ -0.16
DSCAM-202ENST00000404019 CSRNP3Q8WYN3 585 aa14.02□□□□□ -0.16
DSCAM-202ENST00000404019 ZCCHC6Q5VYS8 1495 aaKnown RBP13.96□□□□□ -0.18
DSCAM-202ENST00000404019 GTF3C3Q9Y5Q9 886 aa13.95□□□□□ -0.18
DSCAM-202ENST00000404019 ANP32AP39687 249 aaKnown RBP13.92□□□□□ -0.18
DSCAM-202ENST00000404019 TONSLQ96HA7 1378 aa13.89□□□□□ -0.19
DSCAM-202ENST00000404019 HSP90AA1P07900 732 aaKnown RBP13.88□□□□□ -0.19
DSCAM-202ENST00000404019 NPM2Q86SE8 214 aaKnown RBP13.88□□□□□ -0.19
DSCAM-202ENST00000404019 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.87□□□□□ -0.19
DSCAM-202ENST00000404019 SCAF1Q9H7N4 1312 aaKnown RBP13.85□□□□□ -0.19
DSCAM-202ENST00000404019 ANP32BQ92688 251 aaKnown RBP13.83□□□□□ -0.19
DSCAM-202ENST00000404019 DCAF1Q9Y4B6 1507 aa13.83□□□□□ -0.2
DSCAM-202ENST00000404019 UPF2Q9HAU5 1272 aaKnown RBP13.83□□□□□ -0.2
DSCAM-202ENST00000404019 TSPY4P0CV99 314 aa13.81□□□□□ -0.2
DSCAM-202ENST00000404019 TSPY10P0CW01 314 aa13.81□□□□□ -0.2
DSCAM-202ENST00000404019 A0A0G2JS52 829 aa13.8□□□□□ -0.2
DSCAM-202ENST00000404019 CHIC2Q9UKJ5 165 aa13.8□□□□□ -0.2
DSCAM-202ENST00000404019 FAM9BQ8IZU0 186 aa13.78□□□□□ -0.2
DSCAM-202ENST00000404019 SALL2Q9Y467 1007 aaPredicted RBP13.78□□□□□ -0.2
DSCAM-202ENST00000404019 HNRNPUQ00839 825 aaKnown RBP eCLIP13.77□□□□□ -0.21
DSCAM-202ENST00000404019 CHMP7Q8WUX9 453 aaPredicted RBP13.76□□□□□ -0.21
DSCAM-202ENST00000404019 WDR43Q15061 677 aaKnown RBP eCLIP13.75□□□□□ -0.21
DSCAM-202ENST00000404019 TMC1Q8TDI8 760 aa13.75□□□□□ -0.21
DSCAM-202ENST00000404019 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.75□□□□□ -0.21
DSCAM-202ENST00000404019 ERCC6Q03468 1493 aa13.74□□□□□ -0.21
DSCAM-202ENST00000404019 KDM2AQ9Y2K7 1162 aa13.73□□□□□ -0.21
DSCAM-202ENST00000404019 DDX10Q13206 875 aaKnown RBP13.72□□□□□ -0.21
DSCAM-202ENST00000404019 FKBP8Q14318 412 aa13.71□□□□□ -0.21
DSCAM-202ENST00000404019 ZBTB7CA1YPR0 619 aa13.71□□□□□ -0.22
DSCAM-202ENST00000404019 PPP1R15AO75807 674 aaPredicted RBP13.7□□□□□ -0.22
DSCAM-202ENST00000404019 C14orf37Q86TY3 774 aa13.7□□□□□ -0.22
DSCAM-202ENST00000404019 PLEKHG5O94827 1062 aa13.69□□□□□ -0.22
DSCAM-202ENST00000404019 ACIN1Q9UKV3 1341 aaKnown RBP13.68□□□□□ -0.22
DSCAM-202ENST00000404019 MTUS2Q5JR59 1369 aa13.67□□□□□ -0.22
DSCAM-202ENST00000404019 MYH16Q9H6N6 1097 aa13.66□□□□□ -0.22
DSCAM-202ENST00000404019 CCDC136Q96JN2 1154 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms