RNA–Protein interactions for RNA: ENST00000374163.5

RPS6KA1-202, Transcript of ribosomal protein S6 kinase A1, humanhuman

TSL 2

Gene RPS6KA1, Length 3,202 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KA1-202ENST00000374163 NISCHQ9Y2I1 1504 aa20.82■□□□□ 0.92
RPS6KA1-202ENST00000374163 SHROOM4Q9ULL8 1493 aa18.68■□□□□ 0.58
RPS6KA1-202ENST00000374163 SUPT5HO00267 1087 aaKnown RBP18.47■□□□□ 0.55
RPS6KA1-202ENST00000374163 DCAF8L2P0C7V8 631 aa18.39■□□□□ 0.53
RPS6KA1-202ENST00000374163 CHIC1Q5VXU3 224 aa17.6■□□□□ 0.41
RPS6KA1-202ENST00000374163 CCDC180Q9P1Z9 1646 aa17.55■□□□□ 0.4
RPS6KA1-202ENST00000374163 PCGF6Q9BYE7 350 aa17.53■□□□□ 0.4
RPS6KA1-202ENST00000374163 ZCCHC6Q5VYS8 1495 aaKnown RBP17.52■□□□□ 0.4
RPS6KA1-202ENST00000374163 LOC105371045A0A1W2PR82 267 aa17.38■□□□□ 0.37
RPS6KA1-202ENST00000374163 MYO15BQ96JP2 1530 aa17.37■□□□□ 0.37
RPS6KA1-202ENST00000374163 EHMT2Q96KQ7 1210 aa17.32■□□□□ 0.36
RPS6KA1-202ENST00000374163 HRCP23327 699 aa17.26■□□□□ 0.35
RPS6KA1-202ENST00000374163 PPARGC1BQ86YN6 1023 aaKnown RBP17.22■□□□□ 0.35
RPS6KA1-202ENST00000374163 FAM9AQ8IZU1 332 aaPredicted RBP17.19■□□□□ 0.34
RPS6KA1-202ENST00000374163 TRIM41Q8WV44 630 aa17■□□□□ 0.31
RPS6KA1-202ENST00000374163 TRIM26Q12899 539 aaPredicted RBP16.86■□□□□ 0.29
RPS6KA1-202ENST00000374163 SCRIBQ14160 1630 aa16.77■□□□□ 0.28
RPS6KA1-202ENST00000374163 TTBK1Q5TCY1 1321 aaPredicted RBP16.72■□□□□ 0.27
RPS6KA1-202ENST00000374163 DCAF1Q9Y4B6 1507 aa16.72■□□□□ 0.27
RPS6KA1-202ENST00000374163 ABCC9O60706 1549 aa16.71■□□□□ 0.27
RPS6KA1-202ENST00000374163 RSF1Q96T23 1441 aaPredicted RBP16.68■□□□□ 0.26
RPS6KA1-202ENST00000374163 CECR2Q9BXF3 1484 aa16.48■□□□□ 0.23
RPS6KA1-202ENST00000374163 RB1CC1Q8TDY2 1594 aa16.47■□□□□ 0.23
RPS6KA1-202ENST00000374163 ZEB1P37275 1124 aaPredicted RBP16.46■□□□□ 0.23
RPS6KA1-202ENST00000374163 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.45■□□□□ 0.22
RPS6KA1-202ENST00000374163 CCER1Q8TC90 406 aaPredicted RBP16.41■□□□□ 0.22
RPS6KA1-202ENST00000374163 UBTFP17480 764 aaKnown RBP16.32■□□□□ 0.2
RPS6KA1-202ENST00000374163 MROH2BQ7Z745 1585 aa16.32■□□□□ 0.2
RPS6KA1-202ENST00000374163 RANGAP1P46060 587 aaPredicted RBP16.32■□□□□ 0.2
RPS6KA1-202ENST00000374163 NACADO15069 1562 aa16.31■□□□□ 0.2
RPS6KA1-202ENST00000374163 PABPN1Q86U42 306 aaKnown RBP eCLIP16.3■□□□□ 0.2
RPS6KA1-202ENST00000374163 WIZO95785 1651 aa16.21■□□□□ 0.18
RPS6KA1-202ENST00000374163 HNRNPUL2Q1KMD3 747 aaKnown RBP16.07■□□□□ 0.16
RPS6KA1-202ENST00000374163 SCAF1Q9H7N4 1312 aaKnown RBP16.07■□□□□ 0.16
RPS6KA1-202ENST00000374163 ABCC8Q09428 1581 aa16.06■□□□□ 0.16
RPS6KA1-202ENST00000374163 CSRNP3Q8WYN3 585 aa16.05■□□□□ 0.16
RPS6KA1-202ENST00000374163 DIEXFQ68CQ4 756 aaKnown RBP16.04■□□□□ 0.16
RPS6KA1-202ENST00000374163 CCDC88BA6NC98 1476 aa16.03■□□□□ 0.16
RPS6KA1-202ENST00000374163 SOGA1O94964 1423 aa16.02■□□□□ 0.15
RPS6KA1-202ENST00000374163 YTHDC1Q96MU7 727 aaKnown RBP16■□□□□ 0.15
RPS6KA1-202ENST00000374163 APLP2Q06481 763 aa15.99■□□□□ 0.15
RPS6KA1-202ENST00000374163 BAZ1AQ9NRL2 1556 aaPredicted RBP15.96■□□□□ 0.15
RPS6KA1-202ENST00000374163 UNC13AQ9UPW8 1703 aa15.96■□□□□ 0.15
RPS6KA1-202ENST00000374163 CEP162Q5TB80 1403 aa15.94■□□□□ 0.14
RPS6KA1-202ENST00000374163 NEUROD1Q13562 356 aa15.92■□□□□ 0.14
RPS6KA1-202ENST00000374163 RUSC2Q8N2Y8 1516 aa15.91■□□□□ 0.14
RPS6KA1-202ENST00000374163 CENPBP07199 599 aaPredicted RBP15.87■□□□□ 0.13
RPS6KA1-202ENST00000374163 GTF3C3Q9Y5Q9 886 aa15.86■□□□□ 0.13
RPS6KA1-202ENST00000374163 ACIN1Q9UKV3 1341 aaKnown RBP15.85■□□□□ 0.13
RPS6KA1-202ENST00000374163 PELP1Q8IZL8 1130 aaKnown RBP15.84■□□□□ 0.13
RPS6KA1-202ENST00000374163 TNIKQ9UKE5 1360 aa15.8■□□□□ 0.12
RPS6KA1-202ENST00000374163 TOP2AP11388 1531 aaKnown RBP15.79■□□□□ 0.12
RPS6KA1-202ENST00000374163 ZNF316A6NFI3 1004 aaPredicted RBP15.77■□□□□ 0.12
RPS6KA1-202ENST00000374163 SMARCA4P51532 1647 aa15.77■□□□□ 0.11
RPS6KA1-202ENST00000374163 BICRAQ9NZM4 1560 aa15.76■□□□□ 0.11
RPS6KA1-202ENST00000374163 WRNQ14191 1432 aaPredicted RBP eCLIP15.76■□□□□ 0.11
RPS6KA1-202ENST00000374163 ITGAEP38570 1179 aa15.76■□□□□ 0.11
RPS6KA1-202ENST00000374163 SMARCA2P51531 1590 aa15.74■□□□□ 0.11
RPS6KA1-202ENST00000374163 GOLGA3Q08378 1498 aa15.68■□□□□ 0.1
RPS6KA1-202ENST00000374163 CLIP1P30622 1438 aa15.67■□□□□ 0.1
RPS6KA1-202ENST00000374163 MIER1Q8N108 512 aa15.67■□□□□ 0.1
RPS6KA1-202ENST00000374163 ATP1B4Q9UN42 357 aaPredicted RBP15.64■□□□□ 0.09
RPS6KA1-202ENST00000374163 EEA1Q15075 1411 aa15.64■□□□□ 0.09
RPS6KA1-202ENST00000374163 EIF4G1Q04637 1599 aaKnown RBP15.61■□□□□ 0.09
RPS6KA1-202ENST00000374163 CEP164Q9UPV0 1460 aa15.56■□□□□ 0.08
RPS6KA1-202ENST00000374163 BAZ1BQ9UIG0 1483 aaKnown RBP15.56■□□□□ 0.08
RPS6KA1-202ENST00000374163 RAPGEF2Q9Y4G8 1499 aa15.54■□□□□ 0.08
RPS6KA1-202ENST00000374163 KANK4Q5T7N3 995 aaPredicted RBP15.52■□□□□ 0.07
RPS6KA1-202ENST00000374163 SYNJ1O43426 1573 aa15.49■□□□□ 0.07
RPS6KA1-202ENST00000374163 ATAD2BQ9ULI0 1458 aa15.48■□□□□ 0.07
RPS6KA1-202ENST00000374163 P3H3Q8IVL6 736 aa15.48■□□□□ 0.07
RPS6KA1-202ENST00000374163 VPS8Q8N3P4 1428 aa15.47■□□□□ 0.07
RPS6KA1-202ENST00000374163 FAM50AQ14320 339 aaKnown RBP15.39■□□□□ 0.06
RPS6KA1-202ENST00000374163 KIF21BO75037 1637 aa15.32■□□□□ 0.04
RPS6KA1-202ENST00000374163 PEG3Q9GZU2 1588 aa15.31■□□□□ 0.04
RPS6KA1-202ENST00000374163 HIRIP3Q9BW71 556 aaPredicted RBP15.31■□□□□ 0.04
RPS6KA1-202ENST00000374163 KIF27Q86VH2 1401 aa15.27■□□□□ 0.03
RPS6KA1-202ENST00000374163 DHX57Q6P158 1386 aaKnown RBP15.26■□□□□ 0.03
RPS6KA1-202ENST00000374163 SIN3AQ96ST3 1273 aa15.24■□□□□ 0.03
RPS6KA1-202ENST00000374163 DDX10Q13206 875 aaKnown RBP15.22■□□□□ 0.03
RPS6KA1-202ENST00000374163 BCANQ96GW7 911 aa15.22■□□□□ 0.03
RPS6KA1-202ENST00000374163 ARAP1Q96P48 1450 aa15.22■□□□□ 0.03
RPS6KA1-202ENST00000374163 KCNH8Q96L42 1107 aa15.22■□□□□ 0.03
RPS6KA1-202ENST00000374163 CCNB3Q8WWL7 1395 aa15.21■□□□□ 0.02
RPS6KA1-202ENST00000374163 CUX2O14529 1486 aa15.17■□□□□ 0.02
RPS6KA1-202ENST00000374163 TOP2BQ02880 1626 aa15.16■□□□□ 0.02
RPS6KA1-202ENST00000374163 PRXQ9BXM0 1461 aa15.16■□□□□ 0.02
RPS6KA1-202ENST00000374163 ARID3CA6NKF2 412 aa15.13■□□□□ 0.01
RPS6KA1-202ENST00000374163 CLSPNQ9HAW4 1339 aa15.13■□□□□ 0.01
RPS6KA1-202ENST00000374163 RAB3GAP2Q9H2M9 1393 aa15.13■□□□□ 0.01
RPS6KA1-202ENST00000374163 CUX1P39880 1505 aa15.13■□□□□ 0.01
RPS6KA1-202ENST00000374163 CARMIL1Q5VZK9 1371 aa15.12■□□□□ 0.01
RPS6KA1-202ENST00000374163 SUPT16HQ9Y5B9 1047 aaKnown RBP15.09■□□□□ 0.01
RPS6KA1-202ENST00000374163 IGF1RP08069 1367 aa15.09■□□□□ 0.01
RPS6KA1-202ENST00000374163 ARHGAP35Q9NRY4 1499 aa15.08■□□□□ 0
RPS6KA1-202ENST00000374163 TRIM52Q96A61 297 aa15.08■□□□□ 0
RPS6KA1-202ENST00000374163 NCAPD3P42695 1498 aa15.07■□□□□ 0
RPS6KA1-202ENST00000374163 HMGXB3Q12766 1538 aa15.06■□□□□ 0
RPS6KA1-202ENST00000374163 MYT1Q01538 1121 aa15.04■□□□□ -0
RPS6KA1-202ENST00000374163 CNGB1Q14028 1251 aaPredicted RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms